Coccomyxa subellipsoidea: COCSUDRAFT_55859
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Entry
COCSUDRAFT_55859 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K20305
trafficking protein particle complex subunit 8
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_55859
Membrane trafficking [BR:
csl04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
COCSUDRAFT_55859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
17040146
NCBI-ProteinID:
XP_005646704
JGI:
55859
UniProt:
I0YUU1
LinkDB
All DBs
AA seq
1297 aa
AA seq
DB search
MEFRDWISERLTPAVMVISSPEAEEMCQEKNGLTVVDLLRPYGFLHQLSVPVRTVGEHAY
RIREFRVRFYRADMMFQPSPEAADEYLKGVLNAAAKESGSVEIPDVMAAVQSGKGFLTDN
TPWWDKYRDEFFRMTSFGELETFDHPVACLLVLHAHAENPVEAFGKLFHSSRKPPLMAEG
KMEHRIVMHHLLIHGDNVQAEGGYARSEEKLKAARVALGTAAVHLIRINSGRGDLSSKLG
YESLWRHPLPGTLPGGGAGEPPSRPPVPTAGYGECLTKANLDDIKRFSEDFAVRALLPAM
EARVTSTRKGLRNQLKTLLWRKQPGGAAGRDSPMGSVHGGSVHGGNAASAVNGSVGTYGM
GSVEGQMRALADLAFTMQDYDTALSTLRLLASDLRADKAWKQYAAVQEMIGISLFMARGT
MSEVLGAFKEAFYRYNTAAPHETAPRECVRYATRSMLLAAEYARQHGAYNEANYALMKAH
FQEENLRAALLLEQAALCLLRVSPPSVRKYAFHMVLAGLRYNACDQKALGMRAYRQVLSV
YKGHKWAFIEEHIHDVLGKQSRDAGDFELALQHFAAMLQCSHSPPYWQAHYLKQFLDTVA
AATKAKGAAPVLELPLPEVDAEHVTVQADNEICHGNPESRTQPEELWRSLEGPLLSGLDT
GTTWLDAGGSSSKVSALQLSTAVAGEMIEVLISLANPLAVDLHVSRLRLLFEPEPMPTEG
DLGQYAEAQEQAVVLKGGERVRLALGLRPLRPGLLTLTGVEWLLDGNAPGRKLFAPKRPK
HRRTASRAATKAEVQSQCLSFSILDALPRLEASVEQLPPTMLAGEVRKCTLTLRNTGKVP
LRSIRAVCSSPDVYLPPDDADASGATVDSLAPGRERAAGTSALQQPCLRLRRGLTLYTWP
AAKALGPGEELQWPLWVHPRERGQFDFHLAVFFEPAAPVDGMNYRVLRLSHSVDVLPSLD
VAASLAASRADLVTFLLRLSMRNMQGLQALTVRQVSCLCDSWRISQLGRRGEAASAALQP
PSTSITPAIELPAASVATAYFRLHPPEASAADASTSAGEEWFPTRPSKAELQRAALEQQP
EPSTSDTPENKGPDIIVVWALPDAAGNPRCIGAHHVCDLQEKEKVAIRATLRGEERLRHN
FRGGGMCAAALQLDLRNCSDATASLCIETGTGAPGRGMLLPREAVWRRTPELAPQSSTSA
EGATAVAPEPPGGSGGPVPVGARSGTDYLWCGSVRTLVSSLPAGQATSVTLRVAVMAPGV
YDISDYLIRWAFPDVDKLQYSQPGPPLVLRVEDEEEI
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagggattggatctcggagaggctcacgcctgcagtcatggtcatctcttct
ccagaagccgaagagatgtgccaggagaagaacggattgacagtcgtcgatctcttgcgc
ccctacggctttcttcaccagctgagtgtgccggttcgcaccgtgggagagcatgcatac
aggatacgggagttcagagttcgcttctacagagcagacatgatgttccagccctcccca
gaggccgcagatgagtacctgaagggggtattgaacgcagctgccaaggaaagcggttct
gtggagatccctgatgtgatggctgccgtgcagagcggcaagggcttcctgacagacaac
actccttggtgggacaagtatcgggatgagtttttccgcatgacgtcattcggcgagctt
gagacattcgaccaccctgtggcatgcttgctggtgctgcatgcgcatgcagagaaccca
gtggaggcgtttgggaagctcttccactcttcgcgcaagccgcccctcatggcagagggc
aagatggagcatcgcattgtcatgcaccacttgctcatccatggcgacaatgtgcaggcg
gagggcggctatgccaggtcagaggagaagctgaaggcagcgcgggtggcactggggaca
gcggcagtgcacctgatccggatcaactctggcaggggcgatctctccagcaagctgggc
tatgagagcctctggcgccaccccttaccaggcaccctgccgggaggtggtgctggggag
ccaccctccagacccccagtccccactgcgggctatggggagtgcctgaccaaggccaac
ctggatgacatcaagcgcttctcggaggactttgctgtcagggcactgctgcctgccatg
gaggcccgagtgacgtccacaaggaagggactgcgaaaccagctgaagacgctgctttgg
cggaagcagccgggcggcgcggccggcagggactccccgatgggctcggtgcacggcggc
tccgtacacgggggaaacgcggcgagcgccgtaaatggcagcgtgggcacctacggtatg
gggtccgtagagggccagatgcgcgctctggcggacctggcattcacgatgcaggactac
gacaccgcgctgtccacgctgcgcctgctggccagcgacctgcgcgctgacaaggcatgg
aagcagtacgccgctgtccaggagatgattggcatttcgctgttcatggcacggggcaca
atgagcgaggtgttgggagctttcaaggaggctttctaccggtacaacactgctgcgccg
cacgagactgctccgcgcgaatgcgtgcgctacgcaactcgctccatgctgctggcagcg
gagtacgcgcgccaacatggagcctacaatgaggccaactatgccctcatgaaagcccac
ttccaggaggagaacctgcgggcggcactgctgctggagcaggcggcgctgtgcctgctg
cgcgtctcgcctccctcggtgcgcaagtacgcgttccacatggtgcttgccggtctgcgc
tacaacgcatgcgaccagaaggcgctcggtatgcgcgcctacaggcaggtgctgtcggtg
tacaagggccacaagtgggccttcatagaggagcacattcacgacgtgctgggcaagcag
agccgcgacgcaggagatttcgaactggcgctgcagcactttgcagccatgctgcagtgc
tcccactcgccgccttactggcaggcgcactatctcaaacagttcctggacaccgtcgca
gcggccacaaaggccaagggggcggcgccagtattggagctgccactgccggaggtggat
gcagagcatgtgactgtgcaggctgacaacgagatctgccatggcaaccccgagtcgcgc
acgcagcccgaagagctctggcgctctcttgaggggccgttgctctctggattggataca
ggcacgacctggttggatgccgggggcagcagcagcaaggtgtcagcgctgcagctaagc
acggcggtggcaggggagatgatcgaggtcctcatatccctcgccaaccccctggccgtg
gacctccacgtctcgcggctgcgcctgctcttcgagcctgagcccatgccgacagagggt
gacctgggtcaatatgcagaggcacaggagcaggcagtggtcttaaagggtggagagcgc
gtgcgactggctttggggctgcggccactgcggcccgggctactcaccctgaccggggtg
gagtggctgctggacgggaacgcccccggacgcaagctctttgctcccaagcgccccaag
caccgccgcaccgcctcccgggctgccacgaaggccgaggtgcagagccagtgcctgtcc
ttcagcatactggatgccttgccccggctggaggcatctgtggagcagctgcctccgacc
atgctggcaggggaggtgaggaagtgcacgctgacactgcgcaacacaggcaaggtgccc
ctgcgcagcatccgggcagtctgcagcagccccgacgtgtacctgcctcctgacgacgct
gatgcaagcggggcaactgttgacagcttggcaccagggagggaacgcgcggcagggacg
tcagcgctgcagcagccgtgcctgcggctgcgacggggcctgacgctctacacatggcct
gccgccaaggcgctgggcccgggcgaggagctgcagtggcctttgtgggtgcacccgcgg
gagaggggccagttcgacttccacctcgctgtgttctttgagcctgcggcgccagtggac
ggcatgaattacagggtgctacggctgagtcactcggtggacgttctgccgtctctggat
gtggccgccagcctggccgcctccagggccgaccttgtcaccttcctgctccgcctctcc
atgcgcaacatgcaggggctgcaggcgctgacagtgcgccaggtgtcctgcctgtgcgac
agctggcgcatctcccagctgggcaggcggggcgaggccgcctctgctgccctgcagcct
ccatccacatcgatcacccccgccatcgagcttcctgcagcttctgtggcaactgcctac
ttccgcctgcatccccccgaagcctccgccgcggatgcaagcaccagcgctggcgaggag
tggtttcctacgcggccgtccaaagcagagctgcagcgggcagccctagagcagcagccg
gagccatcaacttcagacactcctgagaacaaggggccggacatcatcgtggtttgggcg
ctgccagacgctgccggcaacccccgctgcatcggcgctcaccacgtctgcgacctccaa
gaaaaggagaaggtggcgataagggcgacgctgcgcggggaggagcggctgaggcacaac
ttccgcggcggcggcatgtgcgcagctgccctgcagctggacctgcgcaactgcagcgat
gccacagcctccctctgcatcgagaccggaaccggagcgcccggcagaggcatgctcctt
ccccgcgaggctgtgtggcggcgcacgcctgagctggctcctcagagcagcacgagcgcc
gagggtgccacagctgtggcgccggagccccccggcggcagcggggggcccgtccctgtg
ggtgccagatctggcacggactacctctggtgcggcagcgtccgcacgctcgtgtcctcg
ctgcctgccgggcaggccacaagcgtcactctgcgggtggctgtcatggcgccaggcgtg
tatgacatcagcgattacctcatacgctgggcgttccctgatgtggacaagctgcagtac
agccagccagggccgccactagtgctcagagtggaagatgaagaagaaatttag
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