Coccomyxa subellipsoidea: COCSUDRAFT_58928
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Entry
COCSUDRAFT_58928 CDS
T02914
Name
(RefSeq) WD40 repeat-like protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_58928
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
COCSUDRAFT_58928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40
Coatomer_WDAD
WDR54
TMEM131_like
Motif
Other DBs
NCBI-GeneID:
17044401
NCBI-ProteinID:
XP_005650935
JGI:
58928
UniProt:
I0Z6X2
LinkDB
All DBs
AA seq
550 aa
AA seq
DB search
MEESSDAEIKEKVSKKRGRGESETAQRMAKFKRGAAVATRAIADKKLKGQLRHSEKLAAE
AAYKAAKAEQWLLPEEAGTLEAEGLERTWRFSQEEIVREAETGAAQKVFDLDLPELGPYN
LGFTRSGRHMLLGGRKGHLAIMEWQQRHLVCEVQVRETVRDATFLHNEQFFAAAQKKYVY
IYDKRGLEVHCLKEHTGVRRLEFLPYHFLLASIGEGGVLRYQDTSTGQIIAQHRTKMGTC
DAMRQNPWNGVMQLGHANGVVSMWTPNVTTAVVKMLCHRGPVRAIATDTQGQHMVTAGAD
GQVKVWDVRKLQPMHSYFSRAPADTLDISQRGMLAVGFGRNVQVWKDALAQKQESPYMRH
TLPSGVLRDFQFCPYEDVLAVGHSGGVSTMLVPGAGEPHYDSRVADPFQGRKARREQEVA
HLMDKLQPDMIVLDPSTIAQARSVRKEPKDVAEERKAEAAAANASRRKEQEEKNEGKKRM
KGKNKPSRRQKKKQANIIEARAAPAGKPELRQRMREQGVLSGGGAEKKQPAPIPEDVPRA
LHRFYKKGVQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagtagtgatgcagaaatcaaggaaaaagtctccaaaaaacgggggcgagga
gagagcgagacggcgcagcggatggccaagttcaagcgcggcgctgctgtggcaacgcgc
gccatcgccgacaagaagctgaaggggcagctgcgccacagcgagaagctggcggcagag
gcggcgtacaaggctgccaaggcggagcagtggctgctgcctgaagaggccggcaccctg
gaggctgagggcctcgagcgcacctggcgcttctcacaagaggagatagtgagggaggcg
gagactggcgctgcgcagaaggtgtttgatctggacctgccggagctgggcccttacaat
ttggggttcacgcgcagcgggcgccacatgctgctggggggccgcaagggccacctggcc
atcatggagtggcagcagcggcatcttgtttgcgaagtgcaggtcagagaaacggtgagg
gacgccacattcctgcacaatgagcagttcttcgcggcggcccagaagaagtacgtgtac
atctatgacaagaggggcctggaggtgcactgcctcaaggagcacacaggagtgaggcgg
ctggagttccttccgtaccatttccttctagcgtccataggagagggaggcgtcctcaga
tatcaggacaccagcaccgggcagataattgcgcagcacaggacaaagatgggcacatgt
gacgctatgcggcagaacccgtggaacggtgtcatgcagctgggccacgccaatggggtc
gtgtccatgtggacgcccaacgtgaccaccgcagttgtcaaaatgctgtgccatcggggg
ccggtgcgtgcgattgcgacggacacgcaggggcagcacatggtgacggcgggcgcggac
gggcaggtgaaggtgtgggacgtgcgcaagctgcagccgatgcactcctacttcagccgc
gcgccagccgacaccctcgacatcagccagcgcggcatgctcgccgtcggcttcggccgc
aacgtgcaggtgtggaaggatgcgcttgcgcagaagcaggagtcgccctacatgcgccac
acgctgccaagcggcgtgctgcgcgacttccagttctgtccctacgaggatgtgttggcg
gtgggccacagcgggggcgtgtcgacgatgctggtgccgggcgcgggtgagccgcactac
gactcgcgcgtggccgaccccttccagggccgcaaggcgcgccgcgagcaggaggtcgcg
cacctcatggacaagctgcagcccgacatgatcgtgctcgacccctccaccatcgcgcag
gcgcgctcagtgcggaaggagcccaaggatgtggcagaggagaggaaggcggaggcggcg
gctgcaaacgcgtcgcgcaggaaggagcaggaggagaagaacgaggggaagaagcgcatg
aagggcaagaacaagccctcgcgccgccagaagaagaagcaggccaacatcatcgaggcg
cgtgccgcccctgctgggaagccggagttgcggcagcgcatgcgggagcagggcgtgctg
agcggaggtggtgccgagaagaagcagcccgcgcccatcccagaggacgtgcccagggcg
ctgcacagattctacaaaaagggcgtccaatga
DBGET
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