Coccomyxa subellipsoidea: COCSUDRAFT_63275
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Entry
COCSUDRAFT_63275 CDS
T02914
Name
(RefSeq) ARM repeat-containing protein
KO
K06677
condensin complex subunit 1
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_63275
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
COCSUDRAFT_63275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Adaptin_N
Cnd3
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
17041743
NCBI-ProteinID:
XP_005648295
JGI:
63275
UniProt:
I0YZD2
LinkDB
All DBs
AA seq
1638 aa
AA seq
DB search
MTAEFSIPAKPEDLADEDCVLDVKISRLTAVESLAADDVEEGFSHLSSIARKRLVDGLCS
NLSVLGLSIGALVSVQEPDDAAEHEAAATSHRSALTAYVFLLSWLARLAEDEAKVAASTS
DSAAGGKGRGRKKAAPATHAMLQWDWDGQRDKIARSLAVIADIDLWKLFRPRPPDERLLQ
TWTQSAQLLLESAAAMKSKTSRDGAFAVLSACALKYGQLEAVAGAAVGALARNEHMAAAL
AELAEYSQAKYDDARLGVEMLAEVAAVSPQEYERQQKDDLASSGGVRNTARFVEALADRC
PQLVAANVSMLMGHLGGKAYSLRSSIVTALGHLVHRAFERVPGEEADAQGRQSCSCLLVK
KSQNAQQKVFRDQPQQIGARARLRSKHAVLATLLERVRDGNAYTRARTLQTWAHLAELAC
IPLGHWVTVTNISIWAHLSCIPLGHWVTVTNLAVGKHLKYPFITKHAADLGHRVTVTNPA
GGRLEDKSSIVRRAALQLLTALLLYNPFGAQLPETCFAASLAEYQAKLQELNPQPEKAPE
DADFEDAGKQPAEEAAPMEEDAASGDDVAAEGEPPAEPAPEEAEADTEGDDPIPEEPAVP
EMRLADAQNGDPVGGNVTQMRALVASLEAALAFVRALAGAVPVLTQLLASSTVSDVHDAI
GLLISYSKFGIDGAPAALRKMLPLVFSLDQAIKDAVISAVEELYISNRPPQEAAQCLIDL
THGSNLGELSALEDLVAHLIRHQPQPLLKPITLRALWWLCQQAHRAASAPPNDEAAQDGA
AEAGRDNVQEVRGALLLISMAAAVQPDIVADNLDTLLQVGFSQRRPDPLSARSACIALRH
LATSSQRPDEERLRPAYAALAAAIVGPGSGDPADDGWYTVAEAAVTAIYALHPQPAALCE
AALRRLAADALSPATAVGATAASEEAGGCVSALALSHFFFVLGQVALQHLVYVEQTAKQI
RREVAAKEKAIAEARSERLAAGEAPSQESSAEDDIAEQLGVGGAAEDAELDRLKDCAEAD
ILARANLVGRFAPLVAEFCVRRNLRSAHPVLRASALLALTKLMCLDASFCDKNLQLLFTL
LQNREIEAGERSNLIIALGDLTFRFPNLLEPWTAHIYQPLSDPDTGMRRNCLMVLSHLIL
NDMMKVKGHIARLALCLQDDDPRVAGLAQVFFHELSQKASKSSNPIYNLLPDILSSLSAE
PGLPPAHFQAIMKTLLGYIGKEKHADSLVEKLMLRFEAATEAAQWRNLAFCLTQLNFTEK
GLRKMMEMGKSIRQSLACEEVLDTFKAIFAKARKLPKQTPELKTDLEAFEAKLDADAAEV
AAEEAAAAAARSQAAGPRAAEPAKAASPAEEAGAAPADEGPGQDDEELAAEEAAAPLLGD
AADAPITQPPDDEAVAELGDVLATLALDKQPVSEPPAEAGGAPIPPADQAADANVDVDAA
AAVSDELARLALAQPPVQAAEPTAPAPQPAQTAAADPLSRERTTGGLGDLLAPQEPAAVH
AGRQRPVRQSRPSAAQDATAAPAAGPAGRRRSGRLSAAADQENRHSADAVAAAGAATVKA
ERRSFGAAVQEASPKPEVAEAPAKGAAAKRVAAMRQFWEATAQKEGRPRAGAQGLPHKTR
GQAPLATASSVQDWSDDD
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagaattcagcatcccagcaaagccagaggatctggcagatgaagattgcgtc
ttggatgtgaaaatcagccgcttgacagccgtggaaagccttgctgcagatgatgtggag
gagggtttcagccatctgagcagcattgcacgcaagcggctggtggatgggctgtgttca
aacctctctgtgctgggtctgtccattggggctctggtctctgtgcaagagccggatgat
gcagcagagcacgaggccgctgccacttcgcacaggagtgccctgacagcatatgtcttc
ctgctctcttggctggcaaggctggcagaagatgaagccaaggtagctgccagcacatca
gactcggcggcaggtggcaaaggcaggggcaggaagaaggcagcaccggcgacgcatgcg
atgctgcagtgggactgggacgggcagcgggacaagatcgcgcgctctctggccgtcatc
gcagacatcgacctgtggaagctcttccgcccgcggccgcccgacgagcggctgctgcaa
acctggacccagtctgcgcagctgctgctggagagcgcggcggcgatgaagtccaagact
tccagggacggcgcgtttgcggtgctgtcggcctgcgcgctcaagtacggccagctggag
gcggtggccggcgcggccgtgggggcgctcgcgcgcaacgagcacatggcggcggcgctc
gctgagcttgccgagtactcgcaggccaagtatgacgatgcccgcctgggagttgagatg
ttggcggaggtggcggctgttagcccgcaggagtacgagcgccagcagaaggacgatctg
gccagcagcggcggcgtgcgcaacaccgccagattcgtggaggcccttgctgacaggtgc
ccgcagctggtggcggccaacgtgtcgatgctgatgggccacttgggcggcaaggcctac
tcgctgcgctccagcatcgtcaccgccctgggccacctcgttcacagggccttcgagcgc
gtgcccggagaagaagccgacgcgcaaggccggcagagctgctcatgcttgctggtgaag
aagagtcaaaatgcgcaacagaaggtcttcagagatcagccacagcaaattggggcgcgc
gcgcggctgcggagcaagcacgcggtgctggcgacgctgctggagcgggtgagggatggc
aacgcatacacgcgcgcgcgcacgctgcagacctgggcgcacctcgccgagctggcctgc
atccccctcggccactgggtcaccgtcaccaacatctccatatgggcgcacctctcctgc
atccccctcggccactgggtcactgttaccaacctcgccgttggtaagcaccttaaatac
ccctttattaccaagcacgctgcagacctgggccacagggtcaccgtcaccaaccccgcc
ggtggccggctggaggacaagtcatccatcgtgaggcgtgcggcgctgcagctgctgacg
gcactgctgctgtacaacccctttggcgcgcagctgcccgagacctgcttcgctgcctcc
ctggcagagtaccaggccaagctgcaggaattgaacccacagccagagaaggcgccagag
gacgccgactttgaggatgccggcaagcaacctgcggaggaagctgccccgatggaagag
gatgctgcctccggagatgacgtggcagctgaaggggagccacctgcagagcccgcacca
gaagaggccgaggctgacacagaaggagatgaccccatcccagaagagcctgctgtccca
gagatgcgcctggcagatgcccagaacggcgatccagtgggagggaacgtcacccagatg
cgcgccctggtagcttccctggaagctgcgctggccttcgtccgcgcgctggcgggggcg
gtgccggtgctgactcagctcctggccagctccaccgtctcggacgtgcacgacgccatc
gggttactgatctcctactccaaatttggcatcgacggcgccccggctgccctgcgcaag
atgctgcccctcgtcttctccctggaccaggccatcaaggacgctgtcatcagcgcagtg
gaggagctgtacatcagcaaccggccgccccaggaagcagcacagtgcctcatcgacctc
acgcatggctccaacctgggtgagctgagtgctctggaggaccttgtggcgcacctgatc
aggcaccagcctcagccgctgctcaagcccatcacgctgcgcgcgctctggtggctctgc
caacaagcacaccgagctgcctctgccccgccaaacgacgaggcggcccaggatggcgca
gcggaggccggcagagacaatgttcaagaggtacgcggagcactgctgctaatcagcatg
gccgccgccgtacagccggacatcgtcgcagacaacctcgacacccttctgcaggtgggc
ttcagccagcgccggccggatccgctgtcggcgcgcagtgcgtgcattgctctgcgccac
ctggcgacgtccagtcagcgcccggacgaggagcggctgcggccggcctacgcggccctc
gccgccgccatcgtcggcccgggttcgggggaccccgcggacgatggctggtacaccgtg
gcagaggcggccgtcacggcgatctacgcgctgcacccgcagccggccgcactctgcgaa
gccgcgctgcgccgattggcggccgacgcgctgtcgccggccacagccgtcggcgccacc
gcggcgagcgaggaggccggtggatgcgtcagcgccctggccctctcccacttcttcttc
gtgctgggccaggtggctctgcagcatctggtgtacgtggagcagacggccaagcagatc
cggagggaggtggccgccaaggagaaagcaatcgccgaggcccgctctgagcgcctggct
gccggcgaagccccgtcccaagagagctcggcggaggatgacatagcggagcagctggga
gtgggaggcgcggccgaggacgctgagctggaccggctgaaggactgcgccgaggccgac
atcctggcgcgtgccaacctcgtcggccgattcgctccccttgtcgcagagttctgcgtg
cgcaggaacctgcgctcggcgcaccctgtgctgcgcgcatcggccctgctggcgctgact
aagctcatgtgcctggacgcgtccttctgcgacaagaacctgcagctgctcttcaccctg
ctgcagaacagggagattgaggcgggggagcgaagcaatctgatcatagcgctgggggat
ttgaccttccggttccccaacctgctggagccctggaccgcccacatctaccagcccctc
tccgaccccgacacaggaatgcggcgcaattgtctgatggtgctgtcacacctcatcctc
aacgacatgatgaaggtgaagggccacatcgcgcgactggcactttgcctccaggatgat
gatccgcgcgtggccggccttgcccaagtcttcttccacgaactctcccagaaagcctcc
aagagctccaatcccatctacaacctgctgccagacatcctgtccagcctcagtgccgag
ccgggcctgccgccagctcacttccaggccataatgaagacgctgctgggctatatcggc
aaggagaagcatgcagacagcctggttgagaagctcatgctgcgatttgaggctgccacc
gaagccgcgcagtggcgcaacctcgccttctgcctgacgcagctgaacttcacggagaag
ggcctgcgcaagatgatggagatgggcaagagcatccgccagtcgttggcctgcgaggaa
gtgctggacaccttcaaggcgatctttgcaaaggcgcgcaagctgccgaagcagactccg
gagctgaagacggacttggaggccttcgaggcaaagctggacgccgacgctgccgaggtc
gccgcggaggaggcagccgccgcggccgcgcgctcgcaggcggccggcccccgcgccgcc
gagccggccaaggcggcttcaccggcggaagaggccggggccgcaccagccgatgagggg
cccgggcaagatgatgaggagcttgccgcggaggaggcagccgcgcccctgcttggagac
gcagcggacgcgccaatcactcagccgcctgacgatgaagctgtggcagaactgggcgat
gtgctggccaccctggcactggacaagcagcccgtctctgagccgccagccgaggcaggc
ggcgcacccatccctccggccgaccaggctgcagatgccaacgtcgatgtcgatgccgca
gcggctgtcagcgacgagctcgcgcgccttgcgttggcgcagccgccggtccaggccgcc
gagccaaccgcacccgccccgcagccagcacagacagctgcagctgaccctctgagcagg
gagcgcaccactggcgggcttggtgatttattggcgccgcaggagcctgcggccgtccat
gctggaaggcagcggccagtgcggcagagcaggccgtctgcggcgcaggatgccaccgcg
gcgcctgcggccggcccggccggccgccgccgctccggccgcctgagcgccgcggcggac
caggagaaccgccacagcgccgatgccgtggcggccgccggtgcggccacggtgaaggca
gagcggcgcagctttggagctgcggtccaggaagcttcaccaaagccggaggtcgctgag
gctccagcaaagggtgcggcggccaagcgcgtggcggcgatgcggcagttctgggaggcg
acggcgcagaaggagggacgcccccgcgctggcgcccagggcctgccccacaagacccgc
gggcaggcgcccctggcgacagccagctccgtgcaagactggagcgatgacgactga
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integrated database retrieval system
