Cyanobacterium stanieri: Cyast_0745
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Entry
Cyast_0745 CDS
T02377
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03410
Base excision repair
csn03430
Mismatch repair
csn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cyast_0745
03430 Mismatch repair
Cyast_0745
03440 Homologous recombination
Cyast_0745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_0745
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cyast_0745
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cyast_0745
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cyast_0745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
REPA_OB_2
Motif
Other DBs
NCBI-ProteinID:
AFZ46718
UniProt:
K9YKW3
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All DBs
Position
833377..835098
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AA seq
573 aa
AA seq
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MTGNLPKQRWHFNQPNQQLVQQFSQLLGLSPIMAEVVINRGLDVPEDAQIYLDPEKQNLP
SPLTEFPDLAKCLDLLLGAIALNSKIAICGDYDADGMTSTALLIRALRHLGANVDYAIPS
RMQDGYGINKRIVREFKEEGVSLILTVDNGISAYEPIALAKELGLQVIITDHHDLPPQLP
PADGILNPKLLPPNSPYGGLAGVGVAYVLGVTLAQKMGKLEGLTRQLLELFTLGTIADLA
PLTGVNRRWLKRGLKRLAQPQILGIQALIKVGGVDKKKKTLNSDDIGFKLGPRINAIGRI
SDPQIVIELLTTEDETIAFDRARECNAVNQKRQELCKQIEKDAINLIEAQKIDYKGDRFL
LLLGEHWHHGVIGIVASRLVERYGVPVFIATYEDEEKNHIRGSARGIEEYNIFDALQYCD
DLLMKYGGHKAAGGFSFVTKNIDSIKHRLRQFSHQLLSPEHLKPLLKIDSKISFEEANFE
LIKEIETLYPWGIENAPPIFWTSEVKVVKQNLTKGGEHLQLRLKDDSGTEVKCIVWNKSY
YYPLPPVIDVAYKVCVNEWQGNKTVQLDIQGFK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtaatttaccaaaacaacgatggcattttaatcaacccaatcagcaactggtg
caacaattttcccagttgttgggtttgtctcccattatggcggaggtggtgattaatcgt
ggtttggatgttcctgaagatgcccagatttatcttgatcctgaaaaacaaaatttaccc
tcccctttaacggaatttcctgacctagcaaaatgtcttgatttactcctaggggcgatc
gcccttaactccaaaatagccatctgcggcgattatgatgccgatggtatgaccagcaca
gccctgttaattcgagccttaagacaccttggagccaatgtggactatgccattcctagc
cgtatgcaggacggttacggcatcaataaacgcattgtacgggaatttaaagaagaaggg
gtaagtttaattttgaccgtggataacggtatctcagcctacgaacccatcgccctcgcc
aaagaattgggtttacaagtaatcataaccgatcaccacgatttaccaccccaactcccc
cccgccgatggcattctcaaccccaaactattgccccccaactctccctatggtggcttg
gcaggggtgggggtagcctacgtattgggggttactcttgctcaaaaaatgggcaaatta
gaaggtttaacaaggcaattgctcgaactttttaccctcggcaccattgccgatttggca
cccctgacgggggttaaccgtcgttggcttaaaaggggcttaaaacgattagctcaaccg
caaattttgggcatccaagccctaatcaaagtggggggggttgataagaagaaaaaaacc
ctcaattccgatgacatcggtttcaaattgggccctagaatcaacgccatcgggcgtatc
agtgaccctcaaattgtcattgaattactgaccacagaagatgaaaccattgcttttgat
agggcgagggaatgtaatgccgtcaatcaaaaacgacaggagttatgtaaacaaatcgaa
aaagatgccataaacctcattgaagcacaaaaaattgattataagggcgatcgcttccta
ctacttttaggagaacactggcaccatggagtaattggcatcgttgcctcccgtttagta
gaacgttatggagtgcctgtattcattgctacctatgaagatgaagaaaaaaaccatatc
agaggttcggctaggggcatagaagaatataatatttttgatgctctccaatattgtgat
gatttattaatgaaatatggcggtcacaaagccgcagggggatttagttttgtcaccaaa
aacatagattccattaagcatagattacgtcaatttagccatcaattattatcccctgaa
cacctcaaacctttattaaaaattgatagtaaaattagttttgaagaggctaattttgaa
ttaataaaagagattgaaacgctttatccttggggcatagagaacgcccctcctattttt
tggacttccgaagtaaaagtagttaaacaaaacttaaccaaaggaggagaacacctacaa
ttgagattaaaagatgattcaggaacagaagtaaaatgtattgtatggaacaaaagttat
tattatccccttcccccagttattgatgttgcttataaagtttgtgtcaatgaatggcaa
ggaaataaaacagtacaattagacattcaaggatttaagtaa
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