Ceratosolen solmsi marchali (fig wasp): 105359217
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Entry
105359217 CDS
T06056
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03022
Basal transcription factors
csol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105359217
09124 Replication and repair
03420 Nucleotide excision repair
105359217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105359217
03400 DNA repair and recombination proteins [BR:
csol03400
]
105359217
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105359217
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105359217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
105359217
NCBI-ProteinID:
XP_011494040
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSTTISGKNLLQPMGLQCKDLYEYLKMRSPEMLNKLYNNPPICLAVYRELPEIARHYVMR
LLFVEQPVPQAVIASWCSKLHVDVHLKVVQVMNELNIWKEASIPGGLPGWILNATFRKNL
KIVLLGGGTSWTMSNQLETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEEDGSPVITQAGFQFLLLDTAAQVWYFILQYLDTVEARGLDLVECLTFLF
QLNFSTLGKDYSTQGMMSGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDLEKERYIVVETNYRVYAYTNSNLQVALIGLFCELLYRFPNLVVAILTRDSVRQALKS
GITASQIVGYLNQHAHNKMIEAGPPTLPPTIVDQIKLWENERNRFIFSEGVLYSQFHSQT
DFEVLRDHAVSLGVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGAN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgacaatcagtgggaagaatttgctgcagccaatggggctacagtgcaaggat
ttgtacgagtatttaaagatgaggtctccagaaatgttaaataagctttacaacaatcct
ccgatttgcttggccgtttatagagaattgccagagatagcaaggcattatgttatgagg
ctactgttcgtggaacagccggttccacaggctgtaatagcctcgtggtgttccaagctt
cacgtggatgtacacctcaaagttgtacaagtaatgaacgaattgaacatttggaaagag
gcatcgatacccgggggtttgcctggctggatactcaatgcaacgtttaggaaaaattta
aaaattgtattattgggaggtggaacgtcctggacaatgtccaatcaacttgagactgac
agtaaacctagagacgttgcttttctggactcttatgcattggagaggtgggagtgcgtg
ttgcattacatggttggatcgcagcaacaggaaggcatatccgcggatgctgttagaatt
ttattacacgctggtcttatgaaacgggacgaagaagatggcagtcctgttattacccaa
gctggttttcagtttctattgttagataccgcagcccaggtttggtactttattcttcaa
tatttggataccgtagaggcgagaggcctcgatttagtcgaatgtctgacatttcttttt
caattaaatttttccacgcttggtaaagactacagtacgcaaggtatgatgagtggactt
ttgacatttcttcagcacttaagggagtttggcctcgtttatcaacgtaaaagaaaagca
ggaagattttatccaacaagattggctttaaatattgccacaggacaaaataagccattg
tcccgggatttggaaaaggagcgctatatcgtcgttgagacgaattatagagtatacgct
tatacaaattcaaatttacaagtcgcattaattggattgttttgtgaactgctgtacaga
tttccgaatctggttgtggcaatattaacgagagattcggttagacaagcattaaaaagt
ggcataactgccagtcaaattgttggatatttaaatcagcatgcacataataaaatgatc
gaggctggacctccaactcttccaccaacaattgtagatcaaattaaattatgggagaat
gaaagaaatcgatttatatttagcgaaggagttctgtacagtcaatttcactctcaaact
gactttgaagttctcagggatcatgcggtgtctttgggtgttctaatttggcaaagtgaa
agaaagcgaacgatggttgtcacaaaagcaggacacgatgatgtaaagaagttttggaag
cgatattcaaaaggagcaaattaa
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