Ceratosolen solmsi marchali (fig wasp): 105359322
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Entry
105359322 CDS
T06056
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013
Nucleocytoplasmic transport
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105359322
09122 Translation
03013 Nucleocytoplasmic transport
105359322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105359322
03041 Spliceosome [BR:
csol03041
]
105359322
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105359322
Spliceosome [BR:
csol03041
]
Complex C
Other components
EJC/TREX
105359322
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105359322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Enkurin
Motif
Other DBs
NCBI-GeneID:
105359322
NCBI-ProteinID:
XP_011494195
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MFTMSSFETLRKDYSKYVQQCLKTSDIATFQKQCTEQCANDKDRKPAIDQALRDTLVTIL
SNNANNNTQALETYIKFCIELCRKDLATTSIPVMLLSDMFDAMTLDHCEELFTYVENNVA
IWKEDLFFGACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEF
NLENVTEFGTEKSEEEVAQQMETDEEKVDIKISIDYNLYRKFWALQDFFRNPNQCYNKMH
WKIFSTHATNVLSAFASFKLEDQKDCIIDHSKLELSMEGLCKESHYFAKYLTNEKLLELQ
LSDSNFRRYVLLQFLILFQYLNSTVKFKSETHELKTDQVEWVTATTEQVYTLLTETPPDG
SVFAESVKHILKREEFWNAWKNEGCPAFKKPAVEPISETNETRKPKRLKRRIGDMIRDAQ
VVGKYYMGNPELTKLWNLCPNNLEACKSKDRDFLPSLEIYFEEAIEQLDPVAGIEEEYKK
VNDGNFGWRALRLLAKRSPHFFVHGNYPINKLPEYLEIMIKKIAKDRPQTQMDMKQEAGE
TPPPEQIDQDFSEETLKQDSETIESKPKISRELVEKLAEVLKKNWEKLAVKLGYTDDEIF
FFAKKQTPYEQCQEMLIIWTEEDPDASIENLKSILHNLNYTEALEVLNTNTL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaatgtcgtcttttgaaacgttacggaaagactatagtaaatacgtacagcag
tgtttaaagacatcggatatagctacttttcaaaaacaatgtacagaacagtgtgctaat
gataaggacagaaaaccagcgatcgaccaagctttaagagatactttagtcactatatta
tcgaataatgccaataataatactcaagctttggaaacatatattaaattttgtatagag
ctctgtagaaaagatttagcaacaacgagtatacctgttatgctactaagtgacatgttt
gatgcaatgactttagatcattgcgaagaactatttacatatgtggaaaataatgttgct
atttggaaagaagatttattttttggtgcttgtaaaaataatttactaagaatgtgtaat
gatcttcttaggagactttctagatctcaacaaacagtattttgtggaagaattttgcta
tttttggcaaagttttttccattttcagaaagatctggacttaatattgttagtgagttt
aatttagagaatgtcaccgaatttggaacggaaaagtcagaagaagaagtagcacaacaa
atggaaactgatgaagaaaaagttgatattaaaatatcgatagactataatttgtatagg
aaattttgggccctacaagatttcttccgaaatccaaatcagtgctataataaaatgcat
tggaaaattttttctactcatgccacaaatgtattatcagcatttgcttcatttaaacta
gaagatcaaaaagattgtataatagatcattcgaaacttgaattatcaatggaaggcctt
tgtaaagaatcgcattactttgcaaaatatttgacaaatgaaaaattattagaactacaa
ttgtctgactcaaattttagacgatacgttttgttacagtttttaatattatttcagtat
ttaaacagtacggtaaaatttaaatcagaaacacatgaattgaaaacagaccaagtcgaa
tgggttactgcaactacggaacaagtttatactctactcactgaaactccaccagatgga
tctgtttttgcagaatctgtgaaacatattttaaaacgtgaagaattttggaatgcttgg
aaaaatgaaggctgtccagcttttaaaaaaccagctgtagagccaatttcagaaacaaat
gaaacaagaaaacctaaaagattaaaacgacgcatcggtgatatgatacgtgatgcacaa
gtagtcggaaaatattacatggggaacccagaattaacgaaattatggaacttgtgccca
aataatcttgaagcttgtaaatccaaagatcgagactttttaccatctttagaaatttat
tttgaggaagcaatcgaacagttagatccagtggcaggaattgaagaagagtacaaaaaa
gttaacgatggtaattttggttggagagcactaagactattagctaaaaggagtccacac
ttttttgtacatggaaattaccccattaataagctacctgaatatcttgaaataatgatt
aaaaaaatagctaaagatagaccacaaactcaaatggatatgaagcaagaagcaggagaa
acaccgccacctgaacaaattgatcaagattttagtgaagaaactttgaaacaagattcc
gaaactatagaaagtaaacctaaaataagtcgagaattagtggaaaaattagcagaagtt
ttgaagaaaaattgggaaaaattagctgttaaattaggatacacagatgatgagatattt
ttctttgctaagaaacaaacaccatatgaacaatgccaagaaatgttaattatatggact
gaagaagatcctgatgcatccattgaaaacttaaaatctattttacacaacttaaattat
acagaagcattagaagtattaaacactaatactttgtaa
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