Cytobacillus spongiae: LS684_15400
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Entry
LS684_15400 CDS
T09119
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cspg03019
]
LS684_15400
03009 Ribosome biogenesis [BR:
cspg03009
]
LS684_15400
Messenger RNA biogenesis [BR:
cspg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LS684_15400
Ribosome biogenesis [BR:
cspg03009
]
Prokaryotic type
rRNA processing factors
LS684_15400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
HU-CCDC81_euk_2
S1
DMAP_binding
dCache_2
Anti-TRAP
DUF6779
Motif
Other DBs
NCBI-ProteinID:
UII57966
LinkDB
All DBs
Position
complement(3034066..3035535)
Genome browser
AA seq
489 aa
AA seq
DB search
MKKLIINYLGREKRYALVDGKKIEKLIIEQPKHQSDVGSIYLGTITKVLPGMNAAFVDLG
EDRNGYLHRDKLPAFVLSPLEQKVKDQKGISSFVHQGEKLLVQVEKDATFGKGPRLSGLI
ELTGEALIYMPHGKYVAVSKKIADQTVREEFRQLGYQLKDEAEGLIFRTNVKEKTMAELR
EELDQLREQYEDISRKGERLKKPSLIKRTDLFMDEILFEIEKNSSIEVLVDDLELKHVLE
SFYKENKISFYQGKENIFTAHQIQSEVEKALKRIVWLENGAYIIIEETEALTIIDVNTGK
FSGKSDRSQTVRQTNQWAAAEIGRQIRLRDLAGIILIDFIDMKDDSDRKEVMHALEKELK
KDHRQSRIIGFTSLGILQLTRKKTKVSLQESLTTRCQTCEGTGRVLSAETVAFQLERELW
EYKTSDYEAVQVELSESVQSIFSGEDHVHLKRLEEALSFKILFVTRQSPKPFFHIRKLGS
VKELIEKEK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaattgatcatcaattatcttggaagagaaaaacgctatgctttagtggatggc
aaaaaaattgaaaagctaatcatcgagcaaccgaagcatcaatcagatgtgggtagcatt
tatttaggtactatcacaaaagttttacctgggatgaatgctgcgtttgttgatcttggt
gaggatcggaatggctatttacacagggataagctccctgcatttgtattgtctcctcta
gaacaaaaagtgaaagaccagaaaggaatttcgtcctttgttcatcaaggtgaaaagcta
ttggtgcaagtggagaaggatgcgactttcgggaaaggacctaggctatcagggctcatt
gagttaactggagaggcactcatctatatgccacatggaaagtatgtagccgtttcaaaa
aaaattgccgatcaaacagtacgggaagaatttcgtcagcttggctatcaattgaaggat
gaggcagaagggctaatttttcgtacaaatgtaaaggagaaaactatggctgaactacgt
gaagaattagatcagctcagagaacagtatgaagatattagtcgaaaaggagagaggttg
aaaaagccttctttgattaaacggaccgacttatttatggacgaaatcctttttgagata
gaaaaaaattcatctatcgaagtgctggtagatgaccttgagctaaaacatgtcctagag
tcattctataaagaaaataaaattagcttttatcaagggaaagaaaatatttttaccgct
catcaaattcagtctgaggttgaaaaagcattaaaaagaattgtatggctcgaaaatggt
gcttatatcatcatcgaagaaacggaagcgttaaccatcattgatgtaaatacagggaag
ttctcaggtaaaagtgaccggagtcaaacggtaaggcaaacaaatcaatgggcagcggct
gaaattggacggcaaattcgccttcgagaccttgcgggcattatcttaattgattttatc
gatatgaaagatgattctgatcggaaagaggtcatgcatgcccttgaaaaggagctaaaa
aaagatcatcgtcagtcacgaataataggttttacttcacttggtatattacaattgaca
aggaagaaaacaaaagtatcacttcaggagtctctaacaaccaggtgtcaaacttgtgaa
gggacagggagagtactcagtgcggaaaccgttgcctttcaattagaaagagagctttgg
gagtacaaaacatcagattatgaagccgttcaggtagagctctcagaatctgttcaatct
atattctcaggggaagatcatgttcatttgaaacgcttagaagaagcacttagcttcaaa
atcctcttcgttactaggcagtctcccaaaccgttttttcacattcgtaagctaggaagt
gtaaaagagctaatagaaaaagagaaataa
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