Cytobacillus spongiae: LS684_21365
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Entry
LS684_21365 CDS
T09119
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
cspg
Cytobacillus spongiae
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cspg03012
]
LS684_21365 (selB)
Translation factors [BR:
cspg03012
]
Eukaryotic type
Elongation factors
LS684_21365 (selB)
Prokaryotic type
LS684_21365 (selB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
GTP_EFTU_D2
SRPRB
SelB-wing_2
MMR_HSR1
Phage_186_Fil
aSelB_III
Motif
Other DBs
NCBI-ProteinID:
UII58680
LinkDB
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Position
unnamed:175114..176973
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AA seq
619 aa
AA seq
DB search
MAGHIDHGKTTLTKALTSVDTDRLKAEKERSISIEPGFAPLYHDDEMEISVVDVPGHERF
IRQMIAGVAGIDFVVLVVAADEGVMPQTKEHLDILALLGVTEGMVVLSKSSRVDKELRDM
AREEVLQELEGTVFEDSDVLLVDSITGEGIQELRQKLIVALKDTAPRRIRGDFRLPIDQV
FTIKGQGTVVRGTVFEGSLNTGEEITILPQRIHTRAKQIQSHNRKEFSAFAGQRAAINLS
RVDYKELKRGNVLVSSTHFSVTDTIDVNLVVLDGLVHPLKQRMPVVVHTGTSEVMGRLIF
FDRNTLTNKTDPILCQIRLDESVVAKRGDRFIIRRPSPTETIGGGWIIHPNGGKYKFGEE
TIAFLQAEKKGTPKERLLRLLEQYKCVEDSMILNDLSISHEDLDELLNGDLKWIKLPQSK
ITHMNIVEECMNDMEKALRRFHGEYPLLKGMNSGELKQTFRTYTSELADYVIELKSWKQD
GGLLSLEGFIPHLPPEWEKRCQQVLTFLQSDGTKVKSMNDYFQQAGIPERWRSDFYHFFI
QEKKIVPLDDEKSYSYQVFMEAVANLKENTGKKFDLSEAKEILGVSRKYMIPFLERLDKD
GLTLRMDDQRKWIEEGFKG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccggtcacatcgatcacggaaaaacaacccttacaaaggcccttacttcggtggac
acagatcgtttaaaggcagaaaaagagcgaagcatctccattgaacctgggtttgccccg
ttgtatcatgatgatgaaatggagatttccgtagtggatgtgccgggtcatgaaaggttt
atccggcaaatgatcgcaggtgtggcaggaatcgatttcgtcgttttagtcgtagcggca
gatgaaggggttatgccacaaacaaaggagcatctggatatacttgccctattaggtgta
acggagggcatggtcgtactgtcgaagagttcgagagtagacaaagaacttagagacatg
gcgcgtgaagaggtgctccaggagttggagggaacggtattcgaggattccgatgttctg
cttgtggatagtataaccggtgaggggatccaagaattaaggcagaaactcattgtggca
ttgaaggatacggccccaaggagaattagaggagatttccgtttaccgattgatcaggta
ttcacgataaaggggcagggtaccgttgtaagaggcactgtctttgagggaagcttgaac
accggagaggaaataaccatattgcctcaacgtatacatacaagagcaaagcaaatccaa
agccataataggaaagaattcagtgcgtttgccggtcaacgtgcagccattaacctttca
agagtggattacaaagagctcaagcgggggaatgtacttgtatcgtctactcattttagt
gtaacggatacgattgatgtgaatctcgttgttttagatggactggtccatccactaaaa
caaaggatgcctgttgtagttcataccgggacttctgaagtgatgggaaggcttatattt
tttgaccggaatacattgacaaataaaacggatcctattttatgtcaaatccgtctggat
gagtccgttgttgctaaaagaggggatcggtttatcataagaagaccatccccaacggaa
acgatcgggggaggttggatcattcatcccaatggggggaaatacaaattcggggaagaa
accatcgctttcttgcaggcagaaaagaaaggcacccctaaagaaagactgctcaggctg
cttgaacaatacaagtgtgtcgaagactccatgatattaaacgatctttctatctcacat
gaagacctggatgaactgttgaatggtgatttaaagtggattaaactacctcagtctaaa
attacccatatgaacatagtggaagaatgcatgaacgacatggagaaagctcttcgcagg
ttccatggtgaataccccttactaaaagggatgaatagtggagaattgaagcaaacgttt
agaacgtatacaagtgagctagccgattatgttattgaacttaaatcttggaaacaagac
ggtgggttgctctccttagagggcttcattccccatctccctcctgaatgggaaaaacgg
tgccagcaggtcctgacattcctacagtctgacggaacaaaggtaaagtccatgaacgac
tactttcaacaagcggggatcccggaaagatggaggtctgatttctaccatttctttatt
caggaaaagaaaatcgtacccctggatgatgaaaaatcttattcctatcaagtatttatg
gaagcagtagctaacctgaaagaaaacacaggaaaaaaatttgatctttcagaagcaaag
gaaatattgggagtatccagaaaatatatgatcccgtttttagagagattggataaggat
ggactgacattaaggatggacgatcagcgaaaatggattgaagaaggatttaaagggtga
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