KEGG   Collinsella stercoris: LK434_02595
Entry
LK434_02595       CDS       T07953                                 
Name
(GenBank) sugar nucleotide-binding protein
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
cstc  Collinsella stercoris
Pathway
cstc00521  Streptomycin biosynthesis
cstc00523  Polyketide sugar unit biosynthesis
cstc00541  O-Antigen nucleotide sugar biosynthesis
cstc01100  Metabolic pathways
cstc01110  Biosynthesis of secondary metabolites
cstc01250  Biosynthesis of nucleotide sugars
Module
cstc_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:cstc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    LK434_02595
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LK434_02595
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LK434_02595
Enzymes [BR:cstc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     LK434_02595
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     LK434_02595
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd
Other DBs
NCBI-ProteinID: UEA46012
LinkDB
Position
597157..598617
AA seq 486 aa
MAGMEFEKDLSVAETGIGGLKVVDLAVHGDSRGWFKENWQRAKMTALGIPDLRVVQNNIS
YNDSRGVTRGIHAEPWDKFISVARGSVFGAWVDLREGSETFGKVFTTVLDPSKAIYVPRG
VGNSFQALEDGTAYTYLVDAHWSLELKRTYTFVNLADPELAIEWPIPLDEATVSDADLNH
PMLKDVVPMAPKRTLVTGCNGQLGHAVRALAEERGVAKDFDFCDIDTFDMSDPDAYSKYD
WSLYGAVINCGAYTAVDRAETPEGRAACWAANATGPALLARTCAEHGITLVHVSSDYVFD
GIAEVHTEDEPLSPLSVYGQSKAAGDLAVAGCPRHYIMRSSWVIGEGCNFVKTMKSLSDR
VADSEDKLDKITVVDDQLGRLTFTRDMAQAIFHLLGTHASYGTYNCSGSGAVKSWADIAR
AVFEAANGNGDRVVPASTADYYASAAGPIAPRPVHSALDLSRLETVGFRMPDWEEELAGY
IGALMV
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggccggcatggaattcgagaaggacctctccgtcgccgagaccggcatcgggggcctg
aaggtcgtcgacctcgccgtccacggcgactcgcgcggctggttcaaggagaactggcag
cgcgccaagatgaccgccctgggcatcccggacctcagggtcgtccagaacaacatctcc
tacaacgacagccgcggcgtcacccgcggcatccacgcggagccctgggacaagttcatc
tccgtggcccgcggctcggtcttcggcgcctgggtggacctgcgcgagggaagcgagacc
ttcggcaaggtgttcacgaccgttctggatcccagcaaggccatctacgtcccgcgcggc
gtgggcaactccttccaggccctggaggacggcaccgcctacacctacctggtggacgcc
cactggtcgctcgagctcaagaggacctacaccttcgtgaacctcgccgacccggagctc
gccatcgagtggcccatcccgctcgacgaggccaccgtctccgatgccgacctcaaccac
ccgatgctcaaggacgtcgtccccatggcgcccaagaggacgctcgtcaccggctgcaac
ggccagctgggccatgcggtccgcgcgctggcggaggagcgcggcgtggcgaaggacttc
gacttctgcgacatcgacaccttcgacatgtccgacccggacgcctactcaaaatacgac
tggtccctctacggcgcggtcatcaactgcggcgcctacaccgccgtggaccgcgccgag
acgcccgagggccgcgcggcgtgctgggccgccaacgcgaccgggccggcgctcctcgcc
cgcacctgcgccgagcacggcatcaccctggtccacgtctcctccgactacgtcttcgac
ggcatcgccgaggtgcataccgaggacgaacctttgagcccgctgtccgtctacggacag
tccaaggccgccggggacctcgccgtggccgggtgcccgcgccactacatcatgcgcagc
tcctgggtgatcggcgagggctgcaacttcgtgaagactatgaagagcctgtccgaccgc
gtcgccgactcggaggacaagctggacaagatcaccgtcgtggacgaccagctgggccgt
ctgaccttcacgcgcgatatggcccaggccatcttccacttgctgggcacgcacgcctcc
tacggcacctataactgctccggctccggcgccgtgaagtcctgggcggacatcgcccgc
gccgtcttcgaggccgccaacggcaacggggacagggttgtgccggcgagtaccgccgac
tactacgccagcgccgccggccccatcgccccgcgcccggtccactccgctctcgacctt
tccaggctcgagacggtcggcttccgcatgcccgactgggaggaagaacttgctggttat
attggggcgctgatggtttag

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