KEGG   Collinsella stercoris: LK434_02775
Entry
LK434_02775       CDS       T07953                                 
Name
(GenBank) sugar nucleotide-binding protein
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
cstc  Collinsella stercoris
Pathway
cstc00521  Streptomycin biosynthesis
cstc00523  Polyketide sugar unit biosynthesis
cstc00541  O-Antigen nucleotide sugar biosynthesis
cstc01100  Metabolic pathways
cstc01110  Biosynthesis of secondary metabolites
cstc01250  Biosynthesis of nucleotide sugars
Module
cstc_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:cstc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    LK434_02775
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LK434_02775
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LK434_02775
Enzymes [BR:cstc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     LK434_02775
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     LK434_02775
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd
Other DBs
NCBI-ProteinID: UEA46047
LinkDB
Position
641021..642499
AA seq 492 aa
MADIAFEKDLSVAETGIGGLKVVDLAVHGDSRGWFKENWQRAKMCALGVPDFRIVQNNIS
YNDRKGVTRGIHAEPWDKFISVARGSVFGAWVDLREGSATYGKVYTTVLDPSKAIYVPRG
VGNSFQALEDGTAYTYLVNAHWSAELKGTYTFVNLADPALGIEWPIPLGEATVSEADLNH
PMLADVVPMAPERTLVTGCNGQLGRAVRALAEERGVAKDFDFCDIDTFDMSDPAAYSRYD
WSLYGAVINCGAYTAVDKAETPEGRVAAWRANAIGPALLARTCAEHGITLVHVSSDYVFD
GTAEVHAEDEPLSPLSVYGQSKAAGDLAVAGCPRHYIVRSSWVIGEGRNFVRTMKSLSDR
VADPADALDKVTVVDDQYGRLTFTRDMAEGILWLLGYREGGAEPSSPAPHGAYNLTGSGP
VESWAQIAARVFDLANGNGERVVPVSTAEYYAGAEGAIAPRPVHSALDLSKIGVTGFVPA
DWTERLAEYIDV
NT seq 1479 nt   +upstreamnt  +downstreamnt
gtggcagacatcgcattcgagaaggacctctccgtggcggagaccggcatcgggggcctc
aaggtcgtcgacctcgccgtccacggcgactcgcgcggctggttcaaggagaactggcag
cgcgccaagatgtgtgctctgggcgtccccgacttccgcatcgtccagaacaacatttcc
tacaacgataggaagggcgtcacccgcggcatccacgcggagccctgggacaagttcatc
tccgtcgcccgcggctcggtcttcggcgcctgggtcgacctgcgcgagggcagcgccacc
tacggcaaggtctacacgaccgtgctcgacccgagcaaggccatctacgtgccccgcggc
gtgggcaactccttccaggcgctcgaggacgggacggcctacacctacctggtgaacgcc
cactggtcggccgagcttaagggcacctacacgttcgtgaacctcgccgacccggcgctg
ggcatcgagtggccgatcccgctgggggaggccaccgtctccgaggccgacctcaaccac
ccgatgctcgccgacgtcgtcccgatggcgcccgagaggacgctcgtcaccggctgcaac
ggccagctgggccgcgcggttcgcgcgctcgccgaggagcgtggcgttgccaaggacttc
gacttctgcgacatcgacaccttcgacatgtccgacccggcggcctactccagatacgac
tggtccctctacggcgccgtgatcaactgcggtgcctacacggccgtggataaagccgag
acccccgagggccgcgtcgccgcgtggagggccaacgccatcgggccggcgcttctcgcc
cgcacctgcgccgagcacggcataacgctggtccacgtctcctccgactacgtcttcgac
ggcaccgccgaggtccatgccgaggacgagcccctctcgcccctctccgtctacggccag
tccaaggccgccggggacctcgccgtggccggctgcccgcgccactacatcgtgcgctcc
agctgggtcatcggcgagggccgcaacttcgtcaggacgatgaagtccctctccgaccgg
gtggcggacccggcggacgccctcgacaaggtcaccgtggtcgacgaccagtacggccgg
ctcaccttcacccgcgacatggccgagggcatcctctggctgctcggctaccgcgagggc
ggcgccgagccgagctcgcccgcgccgcacggcgcctacaacctcaccgggtccggcccc
gtcgagtcctgggcgcagatagccgcccgcgtgttcgacctggccaacggcaacggcgag
cgcgtcgtccccgtctcgaccgccgagtactacgccggcgccgagggcgcgatcgccccg
aggccggtccattccgcgctcgacctctcgaagatcggggtgaccggcttcgtgccggcc
gactggaccgagcgcctggcggagtatattgacgtctga

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