Colius striatus (speckled mousebird): 104558107
Help
Entry
104558107 CDS
T08355
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csti04040
]
104558107
Ion channels [BR:
csti04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104558107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
104558107
NCBI-ProteinID:
XP_010200871
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MAELLLPGTNNFRKFTHESLASIEKRIAAKRNCRRNTVDQKPEEKPRPQLDLKAFQKLPA
LYGNPPPELIGEPLEDLDPYYEDHKIFIVLNKQKTIFRFTATRALWILSPFHPIRRTAIK
ILVHSLFTFVIMCTIITNCVFMALTESSKASPSASWNKYVEFTFTGIYTFESLIKILARG
FCLNEFTFLRDPWNWLDFSVIVMAYVGAFSNLGSVSVLRTFRVLRALKTISVVPGLKIIV
GALIQSVKKLANVMILTVFCLSVFALIGLQLFKGNLRQKCIKNSTETSKMNYFHNKTWES
YEMSANDTAYFAKKEGTSDILLCGPGAGTCPPDYVCMRIGPNPDYGFTSFDTFGWAFLSL
FRLMTQDYWERLYQQTLRASGKVYILFFMLVIFLGSFYLVNLILAVVTMAYEDQNKATIA
ETEAKERKFREAMELLQKEQESLAIKGIDLLSISSLEASSLSTKEIKERNNRIKRKKSLG
IEDNEDEQQFSKLQSTDGQRKLSFLGLVYSPNTIQAKRRLSHGSVFNFQIPALEVDSRTH
CDDEETYSTGEHEIQCRSLSGMQMGRCSRGQSQTSHSSHPTTPNCVQNSKWANEDDCHGM
ISEMGGGSSRVHSLDPMSSERVMLPPETEDPGKGNLPAVNDESSMMHLPPRLSVEYFNEA
LQRQRAASAVSIITSVLEELEESQRRCPPCLNDFALKYLIWDCCPLWLRIKKKVSAFIKD
PFIDLTITVCIVMNTLFMALEHNNMSNDFKSMLNVGNLVFTGIFTAEMILKIIALDPYYY
FQQPWNIFDSIIVTLSLIELSLPKHKGKKERRKGGTLSVLRSFRLLRVFKLAKSWPTLNT
LIKIIGNSLGALSNLTLVLAIIVFIFAIVGVQLFGRSYGENSHKIDKNGQPRWHMMDFFH
SFLVVFRILCGEWIETMWDCMVVAEQPLCLLVFLLVMVIGNLVLLNLFIALLLNSFSTDC
LQTAEDDGEMNNLRIAFARIHKGFHFVKSITWDTCCGKLRHMKKAHKKKIKLTVQDPLGL
KCEETKNRKENYNNEWAEKNGDMCSGLEDFITNPNVFVCVPIAEEENTSESFEDDDKLST
FTDIEHGKQFDSVSSSEGSTVDLTNPEDLLRQIPELAEDFKIPEKCFPEGCAQYFRCYMC
SAIKFGGETWWNLRKTCYRIVEHSWFESFIIFMILLSSGALAFEDIHINERKNIKMMLAF
LDKMFTFIFVLEMLLKWVAYGFHKYFTNIWCWLDFLIVGVSLINLMGSSFGPMKSLRTLR
ALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNL
TEEDSELNSSINDKTDCTMYNNTGKIFWVNVKVNFDNVGSGYLALLQVATFKGWMEIMYA
AVDSREKNEQPQMEHSLFMYLYFVNFIIFGSFFTLNLFVGVIIDNFNQQKRKLGGEDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPLNRYQGFLFDIVTCQAFDIGIMILICLNMITMMV
ETHGQSDVKTNVLNKINILFVAVFTAECVLKLVALRQYYFSNAWNIFDSVVVIMSLIALL
LSGIGKAFEHFLPPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMANFAYVKMEDGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGP
PYCDPNINGTIGECGKPAIGIIYFVSYIIISFLIVVNMYIAVILENFNAATEESTEPLGE
DDFDIFYEIWEKFDPEATQFITFSALSDFADSLAEPLRVPKPNKVELIAMDLPMVSGDRI
HCLDILFAFTKRVLGDSGEMDTLKVQMEEKFMAANPSKMSYEPISTTLRHRQEEASATVI
QRAYRSHLLLRSVKQASYLYHHRTCSIDILGDAAPEKEGLIASMMDENYGRSPDKSESLS
STSFPPTYDSVTRDTRGNLMAENGEITGNQQSPDTK
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttgttactgcctggtaccaacaacttccgtaagttcacccatgaatccttg
gcttctattgaaaagagaattgctgccaagaggaattgtcgaagaaatactgtagaccag
aaacctgaggagaaaccacgacctcaacttgacctaaaagctttccagaaattaccagct
ctctatgggaatcctcctccggagcttattggggaaccactggaggatctcgacccatac
tacgaagatcataagattttcattgtgctaaacaaacagaaaacaatcttcagatttacc
gctacacgtgccttatggatcctcagtcctttccatccaatccgaagaacagcaattaaa
attttagtacattcattgttcacttttgtcatcatgtgcactattataactaattgtgtg
ttcatggctctgactgagtcatccaaggcttctccatctgcctcgtggaacaagtatgtt
gagtttactttcactggcatttacacttttgaatcattgataaaaatattggcaagagga
ttctgtctaaatgaattcactttccttcgagatccctggaactggttggatttcagtgtt
attgttatggcgtatgtgggagcatttagtaacttggggagtgtgtcagtccttcggact
ttcagggtgctgagagctttaaaaaccatttcagtagtcccaggactgaagatcattgta
ggggcgcttatccagtctgttaagaagcttgccaatgtgatgatcctgactgttttctgc
ttaagtgtctttgccctcataggtcttcagctttttaagggcaacttgcgacaaaagtgt
atcaagaactctacggagaccagtaaaatgaattatttccataacaaaacttgggaatcc
tatgaaatgtctgctaatgatacagcatactttgctaagaaagagggcacctcagatatt
ttgctatgcggtcctggtgctgggacctgtcctccagactatgtatgcatgaggattgga
cccaatcctgattatggtttcactagttttgatacctttggttgggcctttctttcctta
ttccgcctgatgacccaagactactgggagcgtctgtaccagcagaccctcagagcttct
gggaaggtatatatactcttctttatgctggtcatctttctgggctcattttatctagtc
aacttgattctggctgtagtaaccatggcatacgaagaccagaacaaggctaccattgct
gaaacagaggcaaaggaaaggaaatttcgagaagccatggaattattacaaaaggaacag
gagtcattggctattaaaggaattgatctcctgtcaattagctcgcttgaagcatcttct
ctgtctaccaaagaaataaaagaaagaaacaataggataaagagaaaaaagtccttgggg
atagaagataatgaagatgaacagcaattctccaagttgcagtccacagacggtcaacga
aagttgtctttccttggcctggtgtacagtcccaacacaattcaggcaaaacgcagactt
agccatgggagtgtattcaatttccaaatacctgctttagaagttgattccagaacacac
tgtgatgatgaggaaacctacagtactggggaacacgaaatccagtgtcggtcactttca
ggcatgcagatgggaagatgctccagggggcaaagtcaaacaagccacagctctcatccc
actaccccaaactgtgtgcagaacagcaagtgggcaaatgaggatgactgccatggcatg
atttcggagatgggaggaggaagtagcagggtgcatagcctagatccgatgtcttctgaa
agagtaatgcttccgccagaaacagaagacccaggaaaggggaatctgccagctgtaaat
gatgagagcagcatgatgcatttgcctcctcgtctgtcagtggagtactttaatgaggca
cttcagagacaaagggcagcaagtgcagtcagcataattaccagtgtcttggaggaactt
gaagaatctcagaggagatgcccaccatgcctgaatgattttgctttaaagtatcttatt
tgggactgctgtccactttggttgagaatcaagaaaaaagtatctgctttcataaaggat
ccttttattgatctcaccatcactgtttgtattgtgatgaacactttgttcatggcattg
gagcacaataatatgtcgaatgattttaaatcaatgctgaatgtaggcaacctggttttt
acaggaatcttcactgcagaaatgatcttaaaaatcatcgctctagatccctattattat
tttcagcagccctggaatatctttgacagcataattgtcacattgagtttaattgaactc
agtttacccaaacacaaaggcaagaaagaaaggagaaaaggaggaactctgtcagtttta
cgatccttcagactgctgagagtcttcaaactggcaaagtcctggccaactttaaacact
ctaattaaaataattggtaactccctgggagcactgagtaatctgactcttgtcctggca
atcatcgttttcatttttgctatagtaggagtgcagctttttgggagaagctatggggag
aacagccataaaatcgacaaaaatggtcagccacgctggcacatgatggactttttccac
tcattccttgttgttttccgaatcctgtgtggagaatggattgagaccatgtgggactgt
atggtggttgctgaacaaccactgtgccttcttgtctttctactagtcatggtgatagga
aatttagtgcttctcaaccttttcattgcactgctgctgaattccttcagtactgactgt
ctccagacagcagaggatgatggagagatgaacaacctccgtattgcctttgctcggatt
cacaagggatttcactttgtgaagagcattacgtgggatacctgttgtggaaagctcagg
catatgaagaaagcacacaaaaagaaaatcaaattgacagtgcaggatccacttgggctt
aagtgtgaagaaacaaaaaatcgtaaagagaattacaataatgaatgggctgagaaaaat
ggggacatgtgctcaggtctggaagattttattaccaaccccaatgtatttgtttgtgtt
cctattgctgaggaagagaatacaagtgagagttttgaagatgatgataaactgagcaca
tttacagacatagaacatggcaaacagtttgacagtgtcagctcttctgaaggcagcaca
gtggatctgacaaatcctgaagatcttttgaggcaaattccagagcttgctgaagacttc
aagattcctgaaaaatgttttccagaaggttgtgctcaatactttcgttgttatatgtgt
agtgccataaagtttggaggagaaacatggtggaatttgagaaaaacctgctaccggatt
gttgaacactcctggtttgaatcttttatcatattcatgattcttctgagcagtggagcc
ctggcatttgaagacatccatataaatgaaagaaaaaacattaaaatgatgctggcgttt
cttgacaaaatgttcactttcatctttgttctggagatgctcctgaaatgggtggcttat
ggcttccacaagtacttcaccaatatctggtgctggctggacttccttatcgtaggcgtc
tctctaataaacctcatggggagttcatttggcccaatgaaatctcttaggactctccga
gctctgagacccttaagagcattgtcacgatttgaagggatgagggtggttgtcaatgcc
ctcctcggagcaatcccttcaatcatgaatgttctgcttgtctgcctcatcttctggctc
atctttagcatcatgggagtgaacctttttgctgggaagtttggaaaatgtgtcaatctg
acagaagaagattcagaattaaatagctcaatcaatgataaaacagactgcacaatgtat
aataacacaggaaaaatattctgggtcaatgttaaagtcaactttgataatgttggctct
ggctacctggctcttcttcaggtggcaacatttaaaggttggatggagatcatgtatgca
gcagtagattcacgagagaaaaatgagcagccacagatggagcatagtctgtttatgtat
ctctactttgtaaacttcatcatctttggatctttctttaccttgaatctctttgttggc
gtcattattgacaacttcaaccaacaaaagagaaagttaggaggggaagatatctttatg
acagaagaacagaaaaaatattacaatgcaatgaaaaaattgggatccaagaaacctcaa
aaacccattccaagaccactgaacaggtaccaagggttcctttttgacattgtgacatgc
caagcctttgatattggcatcatgattctcatctgccttaacatgatcaccatgatggtg
gaaacccatgggcaaagtgacgtgaagaccaacgtccttaacaaaatcaacatattgttt
gttgccgtctttactgcagaatgtgtactgaaattggtggctctgaggcagtactatttc
tcaaatgcctggaacatctttgattcagtagttgtgatcatgtcacttattgccttactg
ctttctggcatcggtaaagcctttgaacacttcttaccacctacactcttcagggtcatt
cgcttggctaggattggccgaatactgagactcatccgggctgccaaaggaattcgaact
ctcctgtttgccttaatgatgtccctacctgctctgttcaacattggcctcttgcttttt
ctggtcatgttcatttatgccatttttggcatggctaactttgcctatgtgaagatggaa
gatggcattgatgatatgttcaatttccaaacctttgctaacagtatgctgtgtcttttc
caaatcaccacatcagctggctgggatggtcttctcagccctattttaaacactggccca
ccatactgtgatccaaacataaatggtactataggtgaatgtggtaaacctgccatcggt
attatttattttgtaagttacattattatatcatttctcattgttgtaaacatgtatata
gctgttattctggagaacttcaatgctgctactgaggagagtacagagcctttaggagaa
gatgactttgacatattttatgaaatctgggagaagtttgatcctgaggcaactcaattt
ataactttctctgccctttcagactttgccgattctctggctgaacctttacgtgtacca
aaaccaaacaaagttgaactcatagcaatggacctgcctatggtcagtggagacaggatc
cactgcttggatatcttgtttgcttttaccaaacgagtgctaggagattctggagagatg
gatactctaaaggtacaaatggaggagaaattcatggctgccaatccatcaaaaatgtcc
tatgagccaatctcaactacactcagacatagacaagaggaagcttctgccaccgtcatt
cagcgtgcctacaggagtcatttgctccttcgatccgtaaagcaggcttcttacctgtac
catcacagaacttgcagtattgacattcttggagatgctgctccagaaaaagaaggactt
attgcatctatgatggatgaaaactacggtaggagtcctgacaagtctgagagtttgtcc
tctacatcctttcctccaacgtatgacagtgttacaagagacactagaggcaatctcatg
gctgagaatggagaaattacaggaaatcaacaatctccagacactaaatag
DBGET
integrated database retrieval system
