Colius striatus (speckled mousebird): 104563093
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Entry
104563093 CDS
T08355
Symbol
USP34
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 34
KO
K11853
ubiquitin carboxyl-terminal hydrolase 34 [EC:
3.4.19.12
]
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csti01002
]
104563093 (USP34)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csti04121
]
104563093 (USP34)
Enzymes [BR:
csti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104563093 (USP34)
Peptidases and inhibitors [BR:
csti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104563093 (USP34)
Ubiquitin system [BR:
csti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104563093 (USP34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF3517
zf-ribbon_3
Motif
Other DBs
NCBI-GeneID:
104563093
NCBI-ProteinID:
XP_010207744
LinkDB
All DBs
Position
Unknown
AA seq
3093 aa
AA seq
DB search
MEMVFGYLFFQSDCLTVRKPAPKGAWLGFARAGLEWRGRSSRVFGFGGGLFLPKFTHYRC
YLNSRKDRRVNKAVSDIEGADGLQLRKEHALKIFAYISSWTQRQCLCCFKEYKHLEIFNQ
VVCALINLVIAQVQALRDQLCKHCTINIDSTWQDQSNHADEPLNVERESHEEENGERQKS
IEKKLDSARTCILTEEESTKNTDAFSLWSTDEKEKLLLCVAKIFQIQFPLYTAYKHNTHP
TIEDISAQESNILGAFCDMNDVEVPLHLLRYVCLFCGKNGLSLMKDCFEYGTPETLPFLI
AHAFITVVSNIRIWLHIPAVMQHIIPFRTYVIRYLCKLSDQELRQSAARNMADLMWSTVK
EPLDTALCFDKESLDLAFKYFMSPTLTMRLAGLSQITNQLHTFNDVCNNESLVSDTETSI
AKELADWLISNSVVEHIFGPNLHIEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHC
SRYIHDLFPSLIKNLDPVPLRHLLNLVSTLHPSAHTEQTLYLASMLIKALWNNALAAKAQ
LSKQSSFASLLSTNLPMGNKKEEEELRRAAPSPWSPAASPQSSDNSDTHQSGGSDIEMEE
QLINRTKHVQQRLSDTEESMQGSSDETANSGEDGSSGPGSSSGHSDGSSNEANSSHASQS
AGSPGSDVQSEDIADIEALKEEEDEEEEDRSHNPQKSSRSTDLRGRKLESQTGICLGDSQ
GPSERSGANNGAGKDHVFNTDSVTPVDNRIRLLDACSHAEDAEHDIAGEMSTAHISQGSQ
DSCITHTGDFLGETIGNELFNCRQFIGPQHHHHHHHHHHHHHDGHMVDDMLSADDVSCSS
SQVSAKSEKNMADFDGEESGCEEELVQINSHAELTSHLQQHLPNLASIYHEHLSQGPAVH
KHQYNSNAVTDINLDNVCKKGNTLLWDLVQDEDAIHLSEGLINEAEKLLCSLVCWFTDRQ
IRMRFIEGCLENLANNRSVVVSLRLLPKLFGTFQQFGSSYDTHWITMWAEKELNMMKLFF
DNLVHYIQAVREGRHKHALYSHSAEVQVRLQFLTCVFSTLGSPDHFRLSLEQVDILWHCL
VEDSECYDDALHWFLNQVRSKDQHAMGMETYKHLFLEKMPQLKPETISMTGLNLFQHLCN
LARLATSAYDGGSNSELCGMDQFWGIALRAQSGDVSRAAIQYINSYYINGKTGLEKEQEF
ISKCMESLMIASSNLEQDSHSSLTIIERGLLMLKTHLEAFRRRFAYHLRQWQIEGTGISS
HLKALSDKQSLPLRIVCQPAGLPDKMTIEMYPSDQVADLRAEVTHWYENLQKEQINQQAQ
LQEFGQSSRKGDFPGGLMGPVRMISSGHELTTDYDEKTLHELGFKDMQMVFVSLGAPRRE
RKGEGVQLPASCLPPPQKDNIPMLLLLQEPHLTTLFDLLEMLASFKPPSGEVAMEDSESA
RCEELHLHAENLSRRVWELLMLLPTCPNMLQAFQNISDEQGNDGFSWKDLLRIKSAHKLL
YALEIIEALGKPNRRIRRESTGSYSDLYPDSDDSSEDQIENSKNTWSCKFVAAGGLQQLL
EIFSSGILEPKEQESWTVWQLDCLACLLKLICQFAVDPSDLDLAYHDVFAWSGVAESHRK
RTWPGKSRKTASDHTKGLHIPRLTEVFLVLVQGTSLIQRLMSVAYTYDNLAPRVLKAQSD
HRSRHEVTHYSMWLLVSWAHCCSLVKSSLADSDHLQDWLKKLTLLIPETAVRHESCNGLY
KLSLSGLDGGDSINRSFLLLAASTLLKFLPDAQALKPIRIEDYEEETVLRPGCKEYFWLL
CKLIDNIHVKDASQTTLLDLDALARHLADCIRSREILDHQDGNIEDDGLTGLLRLATSVI
KHKPPFKFSREGQEFLRDIFNLLFLLPSLKDRQQPKCKSHSSRAAAYDLLVEMVKGSVEN
YRLLHNWVMAQHMQSSHAPYKWDYWPHDDVRAECRFVGLTNLGATCYLASTIQQLYMIPE
ARQAIFTAKYSEDMKHKTTLLELQKMFTYLMESECKAYNPRPFCKTYTMDKQPLNTGEQK
DMTEFFTDLITKIEEMSPELKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVAD
MKNIYESLDEVTIKDTLEGDNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVT
MMKEKVNTHFSFPLRLDMTPYTEDFLMGKNDRKEGFKEDGDYLKETESYEYDLIGVTVHT
GTADGGHYYSFIRDIVNPHAYKNNKWYLFNDAEVKPFDSAQLASECFGGEMTTKTYDSVT
DKFMDFSFEKTHSAYMLFYKRMEPEEENGKDYKFDVSSELLEWIWHDNMQFLQDKNIFEH
TYFGFMWQLCSSIPSTLPDPKAVSLMTAKLSTSFVLETFIHSKEKPTMLQWIELLTKQFN
NSQAACEWFLDRMADDDWWPMQILIKCPNQIVRQMFQRLCIHVIQRLRPVHAHLYLQPGM
EDCSDDMDGPVEDIGSRSCVTRFVKTLLSIMEHGVKPHSKHLTEYFAFLYEFAKMGEEES
QFLLSLQAISTMVHFYMGTKGPENPQVEVLSEEEGEEEEEEEDILSLAEEKYRPAALEKM
IALIALLVEQSRSERHLTLSQNDMAALTGGKGFPFLFQHIRDGINIRQTCNLIFSLCRYN
NRLAEHIVSMLFTSIAKLTPEAANPFFKLLTMLMEFAGGPFGMPPFASYILQRIWEVIEY
NPSQCLDWLAVQTPRNKLAHSWVLQNMENWVERFLLAHNYPRVRTSAAYLLVSLIPSNSF
RQMFRSTRSLHIPTRDLPLSPDTTVVLHQVYNVLLGLLSRAKLYVDAAVHGTTKLVPYFS
FMTYCLISKTEKLMFSTYFMDLWNLFQPKLSEPAIATNHNKQALLSFWYNVCVDCPENVR
LIVQNPVVTKNIAFNYILADHDDQDVVLFNRGMLPAYYGILRLCCEQSPVFTRQLASHQN
IQWAFKNLTPHASQYPGAVEELFNLMQLFVAQRPDMREEEIEDIKQFKKTTISCYLRCLD
GRSCWTTLISAFRILLESDEDRLLVVFNRGLILMTESFNTLHMMYHEATACHVTGDLVEL
LSIFLSVLKSTRPYLQRKDVKQALIQWQERIEF
NT seq
9279 nt
NT seq
+upstream
nt +downstream
nt
atggagatggttttcgggtacctatttttccaaagcgactgcttgactgtgaggaaaccg
gcacctaaaggagcctggctcggttttgcgagggccgggctggagtggaggggaaggagc
tcccgggtgtttggcttcgggggtggtctcttccttccgaagtttactcattacaggtgt
tacctaaacagccgtaaggatcggagggttaataaagcagtatcagacattgaaggtgct
gatgggttgcagctcagaaaagaacatgccctcaagatatttgcttacatcagttcctgg
acacaaagacaatgtctgtgctgtttcaaggagtataaacatttggagatctttaaccaa
gtagtatgtgcgctgattaacttagtgattgcccaagttcaagctctgcgggaccagctc
tgtaaacattgcactattaatatagattcaacatggcaagatcagagtaatcacgctgat
gagcccctgaatgtagaaagagagtcacacgaagaagagaatggagaacggcaaaaatct
atagagaagaaattagattctgcaagaacttgtatcctgacagaggaggagtctacaaag
aacactgatgcttttagcttatggagcactgatgagaaggaaaagttattgctgtgtgtg
gcaaaaatctttcagattcagtttcctctgtatactgcttataagcataatactcatccc
acaatagaggatatttctgctcaagaaagcaatatattaggggcgttctgtgatatgaat
gatgttgaagtaccattgcacttgcttcgttatgtttgtctgttttgtggaaaaaatggc
ctttccctcatgaaggattgttttgaatatggaacccctgaaacactgccatttctcata
gcacatgcatttatcacagtggtatctaatatcagaatatggctacacatccctgctgtc
atgcagcacattataccctttaggacttatgttatcaggtatttatgtaaactgtcagac
caggagttgcgacagagtgcagcccggaacatggcagatttaatgtggagcacagttaaa
gaaccgttggatacagccttgtgttttgataaagaaagtcttgatcttgcgtttaaatac
tttatgtctccaactctaacaatgagattggctgggctgagtcaaataacaaaccaactt
cataccttcaatgatgtctgtaataatgagtcattagtttcagacacagaaacgtcaatt
gcaaaagagcttgcagactggctcatcagcaacagtgtagttgagcacatttttggacca
aatttacatattgagatcatcaaacagtgccaagtgattctgaattttcttgcagctgaa
gggagacttagcactcaacatatagactgtatttgggctgcagcacagctaaagcattgc
agtcgttacatacacgacttgtttccttctttgatcaaaaacttggaccctgtcccactt
agacatcttcttaacctagtctcgactcttcatccaagtgctcacactgaacagaccttg
tatttagcatcaatgcttataaaagcgctgtggaataatgcactagcagctaaggctcag
ctgtcaaaacaaagctcttttgcatctttactaagcaccaatctacccatgggaaacaaa
aaagaagaagaggagctcagaagagcagccccttcaccttggtcacccgcagcaagccct
caaagtagtgacaacagtgacacccatcagagtggaggcagtgatattgaaatggaggaa
cagcttattaacagaacaaaacacgtacagcagcgactttcagatacagaggaatccatg
caaggaagctctgatgagacagccaacagcggggaggacggcagcagcggtcctggtagt
agcagtggccacagtgatggatccagcaatgaggccaactccagtcatgcaagccagtct
gctggaagccctggcagtgatgtgcaatctgaagatattgcagatattgaagctctcaaa
gaggaagaggatgaagaggaagaggataggagtcataatcctcagaaaagcagtaggagc
acagatctacgaggcaggaaactggaatcacagacaggcatttgtctgggagattcacaa
gggccttcggagaggagtggtgcaaacaacggggcgggaaaggaccatgtttttaacact
gactctgtgacaccagtggataatcgaattagactgctagatgcttgttctcatgctgag
gatgcagagcatgatatagcaggggaaatgagcactgctcacatttcacaagggtctcaa
gattcttgtataactcacacaggggacttccttggggaaactattggaaatgaattattt
aactgtcgacaattcatcgggccgcagcatcatcaccaccaccaccaccaccaccaccat
caccatgatgggcatatggttgatgatatgctaagtgcagatgatgtgagttgtagtagt
tcccaagtcagtgcaaaatcagagaaaaatatggctgattttgatggggaagagtctggc
tgtgaagaagaacttgtacaaattaattcacatgcagagctaacgtctcatcttcagcag
catcttcctaaccttgcctctatctatcatgaacatcttagtcaaggaccagcagttcat
aaacaccaatataatagcaatgcggtgacagacattaatttggataatgtttgtaagaaa
ggaaatacccttttgtgggatctggtccaggatgaagatgcaattcatctctctgaaggg
ttaataaatgaagcagagaagctgctgtgttctctagtgtgctggttcactgacagacaa
attcgaatgagatttattgaaggctgcttagaaaatttagctaacaacagatcagtagta
gtttcacttcgtcttcttccaaagctatttggtacgtttcaacagtttgggagcagttat
gatacacattggataacaatgtgggcagaaaaagaacttaatatgatgaaacttttcttt
gataatttggtacactacattcaagcagtcagggaaggacgacataagcatgcattatac
agccacagtgcagaagttcaggttcgtctgcaattcctgacatgtgtgttttcaactcta
gggtcgccagatcatttcaggttgagtttagaacaagtggacatactgtggcactgctta
gtagaagattctgaatgttatgatgatgcactacactggtttttaaatcaagtacgaagt
aaagatcagcatgctatgggtatggagacgtacaagcatctttttttggaaaagatgcca
caactaaaacctgaaactattagcatgactggcctaaacctcttccagcatttgtgtaat
ctggctcgattggctactagtgcgtacgatggtggctcaaactcagagttgtgtggcatg
gaccagttctggggtattgctttaagagcacagtctggtgatgtgagtcgagcagctatc
cagtatatcaactcttactatatcaacggtaaaactggtctagagaaagaacaggaattt
attagcaagtgcatggaaagcctgatgatagcctccagtaaccttgagcaagactctcat
tcaagcctgaccatcattgaaagaggactcttaatgctgaagacacacctggaggctttt
aggagaaggtttgcatatcatctgagacagtggcagattgaaggcactggtatcagcagc
cacttgaaagctctgagtgacaaacagtcactgccactaagaattgtatgtcagccagcc
gggcttcctgacaagatgactatagaaatgtaccctagtgaccaggtggctgatctacgg
gcagaagtcacccattggtacgaaaatttgcagaaggagcagataaatcaacaagcacaa
cttcaggagtttggccaaagcagccgcaaaggggatttccctggtggcctcatgggacct
gtgagaatgatttcatctgggcatgaactgacaactgactatgatgaaaaaacacttcat
gagttgggttttaaggatatgcagatggtgtttgtctccctgggtgcaccgaggagggaa
cggaaaggtgaaggcgttcagcttccagcatcttgcctacctcctcctcagaaagacaac
attccaatgcttttactcctgcaagaacctcatctaaccaccctttttgatttgttagag
atgcttgcctcttttaagcctccatctggagaagtggctatggaagacagtgagagtgca
aggtgtgaagaactccatctccacgcagaaaacttatccaggcgtgtctgggaactgtta
atgcttttgccaacgtgccctaatatgttgcaggcattccagaatatttcagatgagcag
ggtaatgatggctttagctggaaggatcttctgcgaataaaaagtgcccataaacttttg
tatgccctggaaattattgaagctttgggaaagcccaacaggaggataagacgtgaatct
acgggaagctacagtgatctgtacccagactctgatgattcaagtgaagatcaaatagag
aatagtaaaaacacatggagctgcaagtttgttgctgctggagggctccaacagttacta
gaaattttcagctctggaatcttagagcccaaagaacaggaatcatggactgtgtggcag
cttgactgtctcgcctgcttactgaagctcatatgccagtttgcagttgatccttctgat
ctggatttagcttaccatgatgtctttgcctggtctggtgtagcagagagtcacaggaaa
agaacgtggccaggcaaatcaaggaagactgcaagtgaccatacaaagggccttcatata
cctcgtttaacagaggtgtttcttgtacttgtccagggaaccagtttgattcagcgactt
atgtcagttgcttatacatatgacaacttggcacctagggtgttgaaagctcaatctgat
cacagatcaagacatgaagtcactcattattcaatgtggctcttggtgagttgggctcac
tgctgttccttggtgaaatccagtctggcagacagtgatcatttgcaagactggctaaag
aagctgactcttcttattccagagactgccgttcgccacgagtcttgcaatggtttgtac
aagttatctctctctgggctggatgggggagactcaattaaccgatcctttctgctgctg
gctgcatctacattgttaaaatttctccctgatgctcaagctctgaaaccaatccggata
gaggattatgaagaagaaacagtgctgcgaccaggctgtaaggagtatttttggctgcta
tgcaaactgattgacaacatacatgtcaaagatgcaagtcagacaacgctgcttgattta
gatgcactagcaaggcatcttgctgactgcattcggagcagagaaatccttgaccatcaa
gatggtaatatagaagatgatggacttacgggattacttcgtcttgcaacaagtgttatt
aagcacaaaccacccttcaaattttctcgtgaaggccaggaatttctgagagacatcttc
aatcttctattcttgctgccaagtttgaaagacagacaacagccaaaatgcaagtcacat
tcttcaagggctgctgcttatgacttgttggtagaaatggtaaaggggtccgtggaaaac
tacaggctgctccacaactgggttatggcacaacatatgcagtcttcccacgcaccatac
aagtgggattattggccacatgatgatgttcgtgctgagtgtagatttgtgggtctaaca
aatcttggagcaacatgttacttggcatccactattcagcaactgtacatgataccagag
gccagacaagcaatctttactgcaaagtattcagaagatatgaaacacaagaccactcta
ctagaacttcagaaaatgtttacatacttaatggaaagtgaatgtaaggcatacaaccca
aggcctttctgtaaaacctataccatggataagcagccactgaacactggagagcagaaa
gatatgactgaattcttcactgacctaataacaaaaatagaagaaatgtctccagaactg
aaaaatacagtgaaaagcttgtttggaggtgtcatcacaaacaatgttgtctctttggac
tgtgagcatgtaagtcagactgctgaagagttctatacagtaagatgccaggttgcagat
atgaagaatatttatgaatctcttgatgaagtaactattaaagataccttggaaggtgac
aacatgtatacatgttctcactgtgggaagaaagtgcgggctgaaaaaagggcatgtttc
aagaaactacctcgtatcttaagcttcaacacaatgagatatacatttaatatggtaacc
atgatgaaggagaaagtcaatacacatttttcattccctttacgtttggatatgacacct
tacactgaggatttcctcatgggcaaaaatgacagaaaagaaggttttaaggaagatggt
gattatttgaaagaaactgagagttatgaatatgatctgataggcgtgacggttcacacg
ggaacggcagatggaggccattactacagtttcatcagagatatagtcaatccccatgct
tacaaaaacaacaaatggtatcttttcaatgatgctgaagtaaaaccatttgattctgcc
cagctcgcttcagaatgttttggtggagaaatgactacaaaaacttacgattctgtcact
gataaatttatggacttctcctttgaaaagacacacagtgcttacatgctgttttataaa
cggatggaaccagaggaggaaaatggcaaagactacaaatttgatgtgtcatcagaattg
ctggagtggatatggcatgataacatgcagtttcttcaagacaagaacatttttgaacat
acatattttgggtttatgtggcagttgtgtagtagcatcccaagcacgctaccagatcca
aaagcagtttccctaatgacagcaaagttaagcacttcctttgtactagagacatttatt
cattcaaaggaaaagcctacaatgcttcagtggattgaactgttaacaaaacagtttaat
aacagtcaggcagcttgtgaatggtttttggatcgtatggctgatgatgattggtggcca
atgcagattctaataaagtgtcccaatcagattgtgagacagatgttccagcgtttgtgt
attcacgtgatacagaggctgaggccagtgcatgcacatctttatctccagccaggaatg
gaagactgttcggatgacatggatggcccagtggaagacattggcagtcgctcttgcgtg
acacgctttgtgaagacactcctgtcaattatggagcacggggtgaaacctcacagcaaa
cacctcaccgaatactttgcctttctgtatgagtttgccaaaatgggagaagaggaaagc
cagttcttgctttcactgcaagccatatctacaatggtccacttctacatgggaactaaa
ggacctgagaacccacaagttgaagtactttctgaggaagaaggagaggaagaggaggaa
gaggaagatatactttctttagcagaagaaaaatacaggcctgctgcacttgagaagatg
attgccctgattgctcttctggttgaacagtctcgctcagaaaggcatttaactttgtca
caaaacgacatggcagcactaacaggaggaaagggttttccttttttgtttcaacatatc
cgtgatggtatcaacatcaggcaaacttgcaatctcattttcagtttgtgtcggtacaat
aatcgccttgcagagcatattgtgtccatgcttttcacatccatagcgaagttgactcct
gaggcagccaatccttttttcaagttgctgaccatgctcatggaatttgctggtggacct
tttggaatgccaccctttgcctcttacattctgcagaggatatgggaggtcattgagtac
aacccatctcagtgcctggattggctggctgtgcaaacaccccgaaataaactagctcac
agctgggtgctgcaaaacatggagaactgggttgaacgttttcttctggcacacaactac
cctagagtgagaacttctgcagcctatctcttggtgtcgcttattccgagcaattccttc
cgtcagatgttccgatcgacccgctctttacacatccccacacgtgacttgcctctcagc
ccagacaccaccgtagttcttcatcaagtctacaacgtgctccttggccttctttcaaga
gctaagctatacgttgatgctgctgtccacggcactaccaaacttgtgccctacttcagt
ttcatgacgtactgtttgatctcaaaaaccgagaaactcatgttttccacttacttcatg
gacttgtggaaccttttccagcctaaactttccgagccggcgatagccaccaaccacaac
aaacaggctttgctctctttctggtacaacgtgtgtgtggactgcccggagaacgtgcgc
cttattgtacagaaccccgtggtgaccaagaacattgccttcaattacatcctcgcagac
cacgacgatcaggatgtggtgctctttaaccgcgggatgctgcccgcctactacggcatc
ctgcgcctctgctgcgagcagtcccctgtcttcaccaggcagttggcttctcaccagaat
atccagtgggcctttaagaatctcacgccacacgccagtcagtacccaggagcagtggaa
gagctgtttaacctcatgcaactgtttgtagctcagagaccagacatgagagaagaagag
atagaagatataaagcaatttaagaaaacaaccattagctgttacctgcgctgcttggac
ggacggtcttgttggaccactttaataagtgccttcagaatattattagaatctgatgaa
gacagacttcttgttgtctttaatagaggattgattctgatgactgagtccttcaatacg
ttgcacatgatgtaccacgaggccacagcttgccatgtcactggagacctggtagaactt
ctctctattttcctttcggttctgaagtcaacacgtccatatcttcaaagaaaagatgtg
aagcaagctctcattcagtggcaggaacggatcgaattt
DBGET
integrated database retrieval system
