Candidatus Caldarchaeum subterraneum: CSUB_C0495
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Entry
CSUB_C0495 CDS
T02904
Name
(GenBank) peptide/nickel ABC transporter permease
KO
K02034
peptide/nickel transport system permease protein
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSUB_C0495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csu02000
]
CSUB_C0495
Transporters [BR:
csu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CSUB_C0495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BAJ50356
UniProt:
E6N5H8
LinkDB
All DBs
Position
complement(462011..463411)
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AA seq
466 aa
AA seq
DB search
MSLSESSWRVFWSSNMSKAGVVLLILYLVISVYVVVSYPLDFGTRFWNNPSYWADNPKEA
PPEWIAFFTAPSPPRHMVFRLENPSEYTIQRFSYGYSDYPSFISITVSGVTYASRPPTLL
FELVRPDGKVVPFYVLSVSRPLPGEQPPYRRHYEAPLRVFVSGDPEAASFVSRFLRNEYG
LEIGPEDILRIGVERYLFGEFVEGRLVPLTGDYVLAVTVNRADEGDAVDDVRVVFGGRVY
GVLGTDRLGRDLATGLLFGFPISLLVGLVTATLTTAIGSLLGMLSGYIGGKTDTIIQRTC
DILNNIPLLPLLIFFTFILRPSIWIIIAILVAFGWSGLAIVVRNIVMQAKTAQFVESAES
IGVPRGRILRRYIFPQIAPFLIAQLIFSTPSAILAEAALSFLGLGDPSLPSWGQILEYAF
RSGGVNLGLWWWVLPPGALIALLSFTFVMLSMGLEPVVSPRLRRMV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtccgagtcgtcgtggagggtgttctggtcgtcgaacatgtcgaaagctggt
gttgtgcttctaatcctatatctcgtcatctcggtctatgtcgttgtttcttatccgctt
gacttcggcacaaggttttggaacaacccttcatattgggccgacaacccgaaagaagca
cctccagagtggatagcatttttcacggcaccttccccgccccgacacatggttttcaga
ctcgagaacccatcagaatacactatacaacggttcagctacggctacagtgattatccc
agcttcatctccataaccgtctcaggtgtcacttacgcttcaaggcctccgactctgttg
tttgagctagttaggccagatggaaaagttgtccccttttacgtcttatctgtttcgagg
cctttgcccggcgagcagcctccctacagaaggcattacgaagcacctttgagggtgttc
gtcagcggagaccctgaggcggcctctttcgtgagcaggtttctccgaaatgagtatggg
ctggagataggtcctgaggacattttgcggattggtgtggagcgttatcttttcggagag
tttgtggagggtaggcttgttcctctgacgggagactatgtgctggctgtcacggtgaat
agggctgatgagggtgatgcagtggatgatgtgagggtggttttcggtggcagggtttac
ggtgtcctaggtaccgataggttgggaagagaccttgcgaccggtcttctattcgggttc
cccatctccctcctcgtggggcttgtgacagccactctgaccacggcgataggctcgctc
ctcggcatgctcagcggctatatcggcggaaaaacggacacaataattcagagaacatgc
gacatattaaacaacataccgttgcttccgctactcatcttcttcacattcatactcagg
ccaagcatctggataatcattgccatcctagttgcgtttggatggtccggactcgcgatt
gttgttagaaacattgtgatgcaggcgaagacagcgcagtttgtcgagtcagcggaatct
atcggcgtcccacgtggccgaatactgagacgctacatcttcccacaaattgcgcccttc
ctcatcgcacagctaatcttctccacaccctcagccattttagccgaagccgctctaagc
ttcctaggactaggcgacccatctttacccagctggggacagatactcgagtatgctttt
agaagtggtggagttaaccttgggctgtggtggtgggttttgccgcccggggccctcata
gcactcctctccttcaccttcgtgatgctctcgatggggttggagccggttgtcagcccg
aggcttaggaggatggtttag
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