Cucumis sativus (cucumber): 101207842
Help
Entry
101207842 CDS
T02486
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101207842
03015 mRNA surveillance pathway
101207842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101207842
03041 Spliceosome [BR:
csv03041
]
101207842
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101207842
Spliceosome [BR:
csv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101207842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101207842
NCBI-ProteinID:
XP_004145330
UniProt:
A0A0A0LVE0
LinkDB
All DBs
Position
1:21669907..21676721
Genome browser
AA seq
905 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPAELDQLVDTTKVKMDVIRPWIATRVTELL
GFEDEVLINFIYGLLDGKEVNGKEVQIQLTGFMEKNTVKFMKELWILLLSAQKNASGVPQ
QFLDAKEEEIRKKKAETDFLANEIQKKREKENREIEEQRSKNMDDGAEKVSNSVLEHTSK
NVRSRAMRNYPEDEEVAEKRNGVRGRSSDRHKSRSMSRSPQRRRRSFSRGRSSSSPRRRD
RRDSFSPRHRSSHLMRRSGSTSHRKSRSPEVRQLRSPSQHSSPSPGRKSPYRSSSPMQRL
SLSPAHRRSPALDKHNRSPSPTRHRRSLSPIRRRRSPSPVRRRRSPSPKWRRRSPSPEWR
RRSPSPGRRRRSPSPGRRRRSPSPGRRRRSPSPGRHRRSPSPIRRWRSPSPIRRRRSPSP
IRRRRSPSPPRRHRSPSPYRRKSPSFVRRRRSPSPSHRRRSPSPAHYRRSPSPIKSHKSR
SPVRRPMLPSPSPTRKLDRSSPLDHRRTPSPLERRSPSTSLSKSPPLLQRSSPGLRKRSS
PSQHGRRSTYGRSYSSEEQENPSPVKVKSAQHRRRSLSQSPMDRSRNVQTSPASQLPSRS
LRSPERDAKERNNSNNRARASSSSLEKSPAPANSPPVTSSANDDRRLSSPQSRAKQHRRD
TRGEEEVATYTREGGNLESRSSLRKSLNSSIVGKVPSPGSDKHPQRDVPGSPNHKKSSSA
HKEPSLVEEQQLSYSREDMKHDEKSHSRRSKAKEDTELPSLENNNNRRDDSDSDLEEGYK
RKAGSKEKKRHRKSDRRDTSSDSEDSYDSELERKESRRRKKEERRLRKEKKRQKREERRR
KKEERRAGKTKAKNLSDNYSDDDDQAAKEESYHSDDADEAEQKRLEIELRKKALESFNAR
KGTRS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgggtttttccggggtacgtctgcggaccaagacactcgtttttcgaacaag
caagcaaagctgttgaagacacagaagttccctgctgaactggaccaattggtggatacg
acaaaggtgaagatggatgttatcaggccgtggattgctacgagggtgaccgagcttctt
gggtttgaagatgaagttcttatcaacttcatatatggtcttttggatggcaaggaagta
aatgggaaggaagttcaaatacaactcactgggttcatggaaaaaaatactgtgaagttt
atgaaagagctttggatactacttctcagtgcccagaagaatgccagtggtgtacctcaa
caatttttggatgccaaagaagaagaaattaggaagaagaaggcagagacagattttctt
gctaatgaaattcagaaaaagagagagaaggaaaatcgagaaatcgaggagcagagatcg
aagaatatggacgatggggctgaaaaggtgtccaattctgttttggagcatacgtcaaag
aatgtgcgctcaagggctatgcgaaattatccagaggacgaggaagtggctgaaaagaga
aatggtgttaggggaagaagcagtgatagacacaagtcaaggagtatgtctagatcacct
caacgaagacgacgctctttttcacgaggaaggtcgtctagtagtccacgtcgaagggac
cgtcgtgattcattctctcctcgacatagatcatcacatttgatgagaagatctggatct
acttcacatcgtaagtctcgatctccagaagtacgtcaattgcgttctccttctcaacat
agttcaccatctcctggtcgtaaatcaccatatcgatcatcttcgcctatgcaacgtcta
tcattatcacctgcacatcgaaggtcaccggcacttgataagcataatagatcaccatca
cccacgaggcatcgtaggtcactatcaccaattagacgtcgtcgttcaccttcacctgtt
cggcgtcgtagatcaccatcacctaaatggcgtcgtagatcaccatcacctgagtggcgt
cgtaggtcaccttcaccaggacgacgtcgtaggtcaccttcaccaggacgacgtcgtagg
tcaccatcaccaggacgacgtcgtaggtcaccatcaccaggacgacatcgtaggtcacca
tcacctatacgacgctggaggtcaccatctccaatacgacgtagaaggtcaccatctcca
atacgacgtcgaaggtcaccatccccaccacgacgtcataggtcaccatctccatatcgt
cgaaaatcaccttcctttgtgcgtcgtcgtaggtcaccatctccatcacatcgtcgtaga
tcaccgtctccggcgcattaccgcagatcaccatcacctattaaaagccataagtctcgt
tctcctgtgcgacgacctatgttaccttcgccctcacccacacgcaaattggataggtca
tccccccttgatcatcgcagaacaccctcacctctggaacgtagatctccatcaacctct
ttaagcaaatctcctccattgctgcaaaggtcatctccaggacttcgcaagagatcaagc
ccttctcaacatggtcgtagatccacatatggtcgaagttattcatcagaggagcaggaa
aacccatcccctgtcaaagtaaaatctgcccaacatcggaggaggtctctgtctcaatct
cccatggacagaagcagaaatgttcagacatctccagcatcccaactaccttctagatct
ttaagatcaccagaaagggatgctaaggaaaggaataattccaataacagagcacgagcg
tcatcatcgtctttggagaagtctccagcaccagcaaattctccaccagttacaagtagt
gctaatgatgataggaggttaagttctccacaatcacgggcaaagcagcatcgtcgtgac
acaaggggagaggaagaagtggccacctacactagggagggtgggaatcttgaatctagg
tcttcattgaggaaatcactgaattcttcaattgttggcaaagtcccttcacctggaagt
gataagcatcctcaaagggatgtgcctggaagtcccaatcataaaaaatcttcatcagca
cacaaagaaccttcacttgttgaggagcagcagctgtcatattcaagagaagatatgaaa
catgatgaaaaaagccactcacgccgaagtaaggccaaggaagacactgaacttccatca
ctcgaaaataataataaccgacgcgatgactcagattctgatttggaggaaggctataag
cgtaaagctggaagtaaggagaagaaaagacacagaaaatcagacaggcgtgacacttct
tcggactctgaagacagctatgattctgaattggagaggaaggagagcaggaggaggaag
aaggaggagaggaggttgcggaaggagaagaagcgccaaaaacgtgaagagcgtagacgc
aaaaaggaagagcgccgtgcagggaagacaaaagctaagaacctcagtgataactactcg
gatgatgatgatcaagctgcaaaggaagagtcttatcacagcgatgatgcagacgaggcc
gagcagaaaaggctagagatcgaattgaggaagaaggcactggaatcattcaatgcaagg
aaaggaacaaggtcctga
DBGET
integrated database retrieval system