Cucumis sativus (cucumber): 101213480
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Entry
101213480 CDS
T02486
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101213480
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101213480
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
90S particles
Helicases
101213480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Motif
Other DBs
NCBI-GeneID:
101213480
NCBI-ProteinID:
XP_004152924
UniProt:
A0A0A0L2E9
LinkDB
All DBs
Position
3:4343828..4349513
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AA seq
734 aa
AA seq
DB search
MKQKFKSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPLPNAPIGRIDDDTY
SRYAGATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLA
FLIPVLEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKDV
NTEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIIS
QLPKHRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESTTATPNSLQQTAMVVPLEQKL
DMLWSFIKAHLNSKILVFLSSCKQVKFVFETFKKLRPGIPLKCLHGRMKQDKRMGIYSEF
CEKRSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGKSVLFIMP
SEMKMLEQLESAKVPIQLIKANTKRLQPVSGLLSALLVKYPNFQQLAQRAFITYLRSIHI
QKDKEIFDVMKLSIDEFSASLGLPMTPKIRFIDQKRRSQKMSANPTTFLALDSSGDENVS
NTMDGELEVGDFKESDQGLFPPIDNPSSEVEDAVAPTRILKKKKLKINVHRPVGTRVSFD
DDGNPLAPLAKLADIKTSNDAFVVDKDEKNEFYKKRREELKQADKEDKLLNRNRLKEKRK
EKMNKMKKRAAKETQDDEDDISESEEERPQKRSKKFVDSDSDIDNKVENKFNTESISVAE
QEELALKLLSSLQS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaaattcaaatccaagaactctggcaagcagaagagactatccgaaaatgaa
gaaattaagctcttaaattcatggattgaatcacagaaaccggactcaggctccaatcct
atgtcgcttcctccgccgctaccgaatgctcccattggccgtatcgacgacgatacatac
tctcgttacgccggagcgacgaggtttgatcagctgccgatttcgagcaagaccaaagat
gggttgcgcaaagctgagttcattgacatgactgacatacagaaggcttcactgcctcac
gcgctttgtggtcgagatattcttggtgcagctaaaactggttcgggaaagacgctagct
tttcttatacctgttcttgaaaaattgtatagagagagatggggtcccgagtttggagta
gggagtataataatatctcccacaagagaattaggagctcagctgtttgatgtattgaaa
gctgtaggaaaatttcataatttcagtgctggcctattaattggtggtcgtaaagatgtt
aacactgagaaggagcacgtgaatgagttgaacattcttgtctgcactcctggtcgactt
cttcagcatatggacgagactccaaattttgattgttcacagcttcaggttttagtcctt
gatgaagcagatcgtattcttgatgttggatttaagaagactttaaatgctatcatctca
cagctacctaagcacagacaaacctttctgttctcagcaactcaaacgaagtctgttcag
gatcttgccagactcagtttgaaagatcctgagtaccttagtgtccatgaagaatctacg
actgccacacccaatagtctacagcaaactgcgatggttgtccctcttgagcagaagctg
gacatgttatggagctttataaaggcgcatcttaattctaagattctcgtgtttctctct
agttgtaagcaggtaaaatttgtttttgaaactttcaaaaagttgcgccctggaatccca
ttgaagtgcctccatggaaggatgaagcaggacaaaaggatgggtatttattccgagttc
tgtgagaagcgctcagttctcttctcaacagatgtagcctctagaggtcttgattttaac
aaggctgttgactgggttgtccaggttgattgccccgaggatgtggcttcttacatacat
agagttggtcgcactgctcggtaccattcaggtgggaaatcggttttatttattatgccc
tcggaaatgaaaatgcttgaacaattggaatcagccaaagtacctattcagcttatcaag
gcaaacacaaaaagacttcaaccagtttctggtttgctgtcagccttgttagtcaagtat
cctaattttcagcaactcgctcaaagggcctttatcacttatcttcggtcaattcatatt
cagaaggataaggaaatatttgatgttatgaaactgtcaattgacgaattttcagcttca
ttggggttgccaatgaccccaaaaattcgtttcattgatcagaaaaggaggtcgcagaag
atgtctgctaatcctaccacttttcttgcattggattcttcgggtgatgagaatgtttcc
aatacaatggatggagaattggaggttggtgactttaaagaaagcgaccaaggacttttt
ccacctattgataacccttctagcgaagttgaagatgctgtggcacctacgcggatattg
aagaaaaagaagttaaagatcaatgtccacaggccagtagggacgagagtcagttttgat
gatgatggcaacccacttgcccctcttgctaagcttgctgacatcaaaactagcaatgat
gcatttgtagtcgataaagatgaaaaaaatgagttctacaaaaagaggagggaagagtta
aaacaagctgacaaggaagacaaacttctcaatcggaatcgtcttaaagagaagcgaaag
gagaagatgaataagatgaagaagagggcggccaaagaaacacaggatgacgaggatgac
atttctgagtctgaagaagaaagaccacagaaaaggtccaagaaatttgttgacagtgat
agtgatattgacaataaagtagaaaacaagttcaatacagagtccatttcagtggcagaa
caagaggagttggctctcaaattattgagttctttgcaatcataa
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