Cucumis sativus (cucumber): 101222187
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Entry
101222187 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101222187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101222187
03036 Chromosome and associated proteins [BR:
csv03036
]
101222187
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101222187
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101222187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
101222187
NCBI-ProteinID:
XP_011650063
UniProt:
A0A0A0LN95
LinkDB
All DBs
Position
2:complement(24348173..24358692)
Genome browser
AA seq
1045 aa
AA seq
DB search
MFGSPNPFGQPSTSPFASQPVFGQTANASNNPFAPKPFGSTSPFGPQTGNTVFGGTSTGV
FGAAQSSSPFPSTTTFGGSSSPAFGATPSTFGSSSTPAFGSSSSSSFGGSSIFGQKPLFG
GFGSTPAQTNPFGSTNQQSQPAFGSNVFGSSSPFGAPSQSAFGATSTPAFGSTSTPAFGA
TSTPAFGAASTPAFGATSTPAFGATSTPAFGAASTPAFGAASTPAFGATSSPAFGSTSTP
AFGSTGNAFGSLSTPVFGSGGGFGASSTPAFGASSTPAFGASSAPAFGASSAPAFGASST
PSFSFGSTPAFGQSTSGFGSSTFGTNTSPFGAQSSPFGAQSTSSFGTSGFGQAGFGGQRG
GSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPAG
QSASGVGFGVPGGQPNPVASSTFSQSSPNPFSTSTPTNPFAPKPSGFGTFGPSTTFSFNS
SAFAPSTPSNPFASTTAASTSAFLSSTTSQFGSSSLFSSSNTQPLASQSAFSSTTSPGTN
LTFPSSLNFGNTQSSSLFQSTTPAIGQTGSAFGAPFSQSSLFSQPSSGVGGNLFSSTPSL
LTSSNPMAFGQTSAPFSMPFQPAQAQAPTSFFSNMGQAQPIGSSGFAGTSSIFGQSNFGQ
SPITQTPAVQPAPATNPFGTLPAMPQMSISRPGAAPSIQYGISSMPVVDKAAPVRISSFL
TPRHLSHRRMRLPVRKYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPT
DQWPSKGNLDKSLPSKDTSVRENGKVAERTSSAVNNLKDTNGNVVENGTSKENIHLNKVN
QKPNGVHEDHSAPKEDLYRTFAGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQEL
AAKERAEPGFCRHVKDFVVGRHGYGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKK
PPCGQGLNKPAEVTILNIKCVDKQTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSYDPVK
GEWKFRVEHFSKYNMEDNEEVEDWE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctcccaacccttttgggcaaccatctactagcccttttgcatctcaacca
gtttttgggcaaactgccaacgcaagtaataatccttttgcacctaagcccttcggcagt
acatccccatttggcccacagacaggaaatacagtatttggtggtacatcaacaggagta
tttggggcagcccaatcttcttctccctttccttccaccacaacatttggcggttcatca
tcaccagcttttggagctactccgtccacttttggatcgtcatcaactcctgcatttggt
agttcatcatcttcatcatttggaggttcttccatttttgggcagaaaccactgttcgga
ggctttggatctactcctgcccaaacaaatccgtttggaagtacaaaccagcaatctcag
ccagcattcggaagcaatgtcttcggttcttcatcaccttttggtgcccctagccagtct
gcatttggagcgactagcactcctgcctttggttccacgagcacccctgcctttggtgcc
acaagcacccctgcatttggtgccgcgagcacaccagcatttggtgccacaagcacacca
gcatttggtgccacgagcaccccagcatttggcgcagcaagcaccccagcctttggtgca
gcaagcacccccgcctttggtgctacaagcagtcctgccttcggttcaacaagcacacct
gcctttggtagtactgggaatgcatttggttcgctaagcacccctgtttttggatcggga
ggtggatttggtgcttctagtactcctgcttttggggcttcaagtactcctgcttttggg
gcttcaagtgctcctgcttttggagcttcaagtgctcctgcttttggagcttctagcact
ccatcctttagctttgggtccactccagcttttgggcagtctacttctggatttggtagt
agtacttttggtaccaatacatctccttttggtgcccaaagttctccttttggagcacaa
tctacatcttcatttggaaccagcggttttgggcaagctggttttggtggtcagcgaggt
ggcagtagagtcactccttatgcaccgacacctgagccagatcctggaagtggcagtaca
caagcagctggaaagttggagtctatatcagccatgcctgtctacaaagataaaagtcac
gaagagttgagatgggaggattatcaattgggggacaaaggtggacctcttccggctggt
cagtctgctagtggtgttggctttggtgttcctggtggacagcctaaccctgtagcttct
tccacatttagtcaatcaagtccaaatcctttttctacatctacaccaacgaatccattt
gcccctaaaccttcgggttttggtacttttggaccttcaacaacgttttcatttaattct
tcggcatttgctccttccactccgtcaaacccctttgcatcgacaacagcagcatcaaca
tcagcttttttgtcatcaacaacctctcagtttggcagctcatctttattcagttcatct
aacactcaaccccttgcctcacaatctgcttttagttcaactacatctccaggaacaaat
cttacatttccttccagcttaaattttggtaacactcaatcatcttccctcttccaatcc
acaacacctgcaatagggcagacaggttcagcctttggcgctcccttttcacaatccagc
ttgtttagtcaaccttcgtctggggttggtgggaatcttttctctagcacaccatcactc
ttaacttcaagcaatccaatggcttttggtcaaacatctgcccctttctccatgcctttt
caaccagcacaagcacaggcacccacttccttttttagcaacatgggtcaggctcaacca
attggttcaagtggttttgcaggaacttcaagcattttcgggcagagtaattttggacaa
tcgcctatcacccagacccccgcagtacaaccagcacctgctaccaatccatttgggacg
ctccctgcaatgccacagatgtcaattagtagaccaggagcagcaccttctattcaatat
ggaatttccagcatgccggttgttgataaagcggctccagtcagaatatcatctttcttg
acgcctcgccacctatctcacagacggatgagattgcctgtgagaaaatataaccctaag
aatgatggcagtccaagggttccatttttcagtgatgatgaagaaacaccaagcactcca
aaggccgatgccctttttattcccagagagaatcctagagcattggttattcgtcccacg
gatcagtggccttcaaaaggcaatttagataaaagtttgccatcgaaggacacctcagtg
cgtgaaaatgggaaggttgctgaacgtacttcctcggccgtcaacaatttgaaggatacc
aatggaaatgttgttgagaatggtactagcaaagagaacatccatctcaacaaagttaac
caaaaaccgaatggggtccatgaggatcactctgctccaaaggaggacttgtataggaca
tttgcagggcacagagctggtgaggctgccattgtttatgaacatggggcagatattgag
gcattaatgccaaagcttcggcattcggactattataccgagccaaagattcaagaatta
gctgccaaagaaagggctgaacctgggttttgccgccatgttaaagattttgtggtgggt
cgccatggttatggaagcatcaaattctttggtgaaacagatgtgcgaaggctcgatcta
gagtccattgttcagtttaacaatcgtgaggtgattgtttatctcgacgagagtaaaaaa
cctccttgtgggcaaggtctgaataagcctgctgaagtaacaatactcaacatcaaatgt
gtagacaagcaaactgggcatcaatataccgaagggcctaaagttgagaagtacaaggag
ttgctaaggaagaagacagaggctcaaggtgctgagttcgtatcgtacgatccagtgaaa
ggggagtggaaattcagggttgaacacttcagcaagtataatatggaagataatgaagaa
gttgaagattgggaatga
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