Carlito syrichta (Philippine tarsier): 103256266 Help Entry 103256266         CDS       T07836                                  Symbol LIG1 Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism csyr  Carlito syrichta (Philippine tarsier) Pathway csyr03030   DNA replication csyr03410   Base excision repair csyr03420   Nucleotide excision repair csyr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:csyr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     103256266 (LIG1)    03410 Base excision repair     103256266 (LIG1)    03420 Nucleotide excision repair     103256266 (LIG1)    03430 Mismatch repair     103256266 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:csyr03032]     103256266 (LIG1)    03400 DNA repair and recombination proteins [BR:csyr03400]     103256266 (LIG1) Enzymes [BR:csyr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      103256266 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      103256266 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      103256266 (LIG1) DNA replication proteins [BR:csyr03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     103256266 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      103256266 (LIG1) DNA repair and recombination proteins [BR:csyr03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      103256266 (LIG1)    NER (nucleotide excision repair)     Other NER factors      103256266 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      103256266 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF1685 PucR Motif Other DBs NCBI-GeneID:  103256266 NCBI-ProteinID:  XP_008052353 Ensembl:  ENSTSYG00000010151 UniProt:  A0A1U7T7J3 LinkDB All DBs Position Unknown AA seq 917 aa AA seqDB search MQRSIMSFFQPQKEGKANKPEKETSDSSRETEPPPKAALKERNGVVAESDSPVKRPGRKT ARVLGSEEEEEDEALTFPKCQKPVPDCPQASPPSPATSPENSPALSDSPPMDVSPSGIPK RRTARKQLPKLTLQDAQEEQSEDTNREAKRRKKEEEAEIPRESLMETKVATKKEAEGGDQ PTTPLKPLRTSKAETLKESVSEPMVAVKQEPQEEDPTKAPPRAPKMLSNFFTPRKPSIKK EVKEEGEGNPGEERTEGRLDPSTYNPAKNNYHPVKDACWKPGQKVPFLAVARTFEKIEEV SARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKALAQAT GRQLESVRAEVAEKGDIGLVAENSRSTQRLMLPPPPLTTSGLFTKFCDIARLTGSASMAK KIDIIKGLFVACRHSEARFITRSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAVVD AGKGKTAEARKSWLEEQGMILKQTFCEVPDLNRIIPVLLEHGLEHLPEHCRLSPGIPLKP MLAHPTREVSEVLKRFDEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDII SRIPKIKLPSVTSFILDTEAVAWNREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDL IYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGL MVKTLDVNATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAS YDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPTPRSYVRIDGAVTPDHWLEPSTVW EVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIQVREDKQPEQATSSAEVAYLYQKQSQ IQNQESDNSDFDFEDIY NT seq 2754 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaagtatcatgtcatttttccaaccccaaaaagagggtaaagcgaacaagcct gagaaggagacatccgacagcagcagagagacagagcctcctccaaaggcagcactgaag gagcggaatggagtggtggccgagagtgactctccagtgaagaggccagggaggaagaca gcccgggtcctgggtagtgaagaggaggaagaggatgaagccctcactttccctaaatgc cagaagcctgtcccggactgcccacaagcctccccgcccagtcccgccacatctcctgag aacagccctgccctctctgacagccctcccatggacgtctccccatccgggatcccaaag cgccgcacagctcggaagcagctcccgaaactgacacttcaggatgcccaggaagagcag agtgaggatacaaacagagaagccaagaggaggaagaaggaggaagaagcagagatccca agagaaagcctcatggagactaaagtggcaacaaagaaggaagcagaaggtggggaccag cccacaacgcccctcaagcccttaaggacttccaaggcagagaccctgaaggaaagcgtt tcagagcccatggtggccgtgaagcaggaaccccaggaggaggaccccacaaaggctccc cctagagcacccaagatgctcagcaacttcttcactccccggaagccatcaatcaaaaaa gaagtgaaggaggagggcgaaggtaacccaggagaggagaggacagaaggacgcctggac ccatccacctacaatcctgccaagaacaactaccatcctgtcaaagatgcctgctggaaa ccgggccagaaggttcctttcctggccgtggcccggacatttgagaagatcgaagaggtt tctgctcggctccggatggtggagacactgagcaacttgctgcgttccgtggtggccctg tcacccccggacctcctccctgtcctttacctcagcctcaaccgccttgggccgccccag cagggcctggagcttggcgtgggtgacggcgtcctgctcaaggcattggcccaggccaca ggtcggcagctggagtccgtccgtgctgaggtggccgagaagggcgacatagggctggtg gccgagaatagccgcagcacccagaggctcatgctgccgccgcctccactcaccacctct gggctcttcaccaagttttgtgacattgccaggctcaccggcagtgcttccatggccaag aagatagacatcatcaaaggtctgtttgttgcctgccgccactcagaagcccgattcatt accaggtccctaagtggacggctgcgccttggactggcggagcagtcagtgttggctgcc ctctcccaggctgtgagcctcacgcccccaggacaagaattccccccagccgtggtggat gctgggaagggcaagacagcagaggccagaaagagctggctagaggagcaaggcatgatt ctgaagcagacgttctgtgaggtgcccgacctgaaccgaattatccccgtactactggag catggcttggaacacctcccggagcactgcaggctgagcccagggatccccctgaaacca atgttggcccatcccacccgtgaggtcagcgaggtcctgaaacgcttcgacgaggcagct ttcacctgcgaatacaaatacgatgggcagagggcacagatccatgttctggaaggcggg gaggtgaagatcttcagcaggaatcaggaagacaatactgggaagtacccagacatcatc agccgcatccccaagattaaactcccatcagtcacatccttcatcctggacaccgaagcc gtggcctggaaccgagaaaagaagcagatccagccgttccaagtgctgaccacccgcaaa cgcaaggaggtggatgcgtcggagatccaggtgcaggtgtgtttgtacgccttcgacctc atctacctcaatggagagtccctggtacgtgagcccctctcccgacgccggcagctgctc cgggagaactttgtggagacagagggcgagtttgtcttcgccacctccctggacaccaag gacatcgagcagattgccgagttcctggagcagtcagtgaaagactcctgcgaggggctg atggtgaagaccctggatgtcaatgccacctatgagatcgccaagagatcgcacaactgg ctcaagctgaagaaagactacctggacggcgtgggcgatacactggaccttgtggtgatt ggcgcctacctgggccgggggaagcgggccggccggtatggaggcttcctgctggcctcc tatgacgaggacagcgaggagctgcaggccatatgcaagcttggaaccggcttcagtgac gaggaactagaggagcatcaccagagcctgaaggccctggtgctgcccaccccacgctcc tatgtgcgaatagatggtgccgtgacccccgaccactggctggagcccagcacagtgtgg gaggtgaagtgcgctgacctctccctctcccccatctatcctgccgcccggggcctggtg gacagtgagaaggggatctcccttcgcttcccccggtttattcaagtccgtgaagacaag cagccggagcaggccacctccagtgccgaggtggcctatttgtaccagaagcagagtcag attcagaaccaagaaagcgacaactcagactttgactttgaagatatttactaa

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