Carlito syrichta (Philippine tarsier): 103258056
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Entry
103258056 CDS
T07836
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csyr03041
]
103258056 (DDX1)
03016 Transfer RNA biogenesis [BR:
csyr03016
]
103258056 (DDX1)
Enzymes [BR:
csyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103258056 (DDX1)
Spliceosome [BR:
csyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103258056 (DDX1)
Transfer RNA biogenesis [BR:
csyr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103258056 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
103258056
NCBI-ProteinID:
XP_008053946
Ensembl:
ENSTSYG00000002477
UniProt:
A0A1U7TJL3
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSYTVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPLDEFDGKVTYGQKRAAGGGNYKGHVDVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgctcaagctgtggaagaaatg
gattggcttctcccaacggacatccaggctgaatctatcccactgatcctaggaggaggt
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctcaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcaaatgaacccatatgacagaggatct
gcctttgccattgggtcagatggtctttgttgtcaaagcagagaagtaaaggaatggcat
gggtgtagagctactaaaggattgatgaaagggaaacactactatgaagtatcctgtcat
gaccaaggactgtgcagagttgggtggtctaccatgcaggcctccttggaccttggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattgggtgttacctagatatagataaa
gggcatgtcaagttctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catattaaaaaccaagccctctttcctgcctgtgttttgaagaatgcagaactaaaattt
aactttggtgaagaagaattcaagtttccaccaaaagatggttttgttgctctttccaag
gcaccggatagttatactgtcaaatctcaacacacaggtaacgcacaggtggcacaaacg
aagtttctccccaatgctccaaaagctctcatcgttgaaccttcccgggagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatacattgataatcctaaattaagggag
cttctgataattggaggtgttgctgcccgggatcagctctctgttttggaaaatggggta
gatatagtcgtaggcactccaggaagactagatgacttggtttcaactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttat
tctgattttataaataggatgcacagtcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtttgttctgctactttgcattcttttgatgtaaagaaactgtctgag
aagataatgcattttcctacatgggttgatttaaaaggagaagattctgttccagatact
gtacaccatgttgttgtcccagtaaatcccaaaactgacagactctgggaaagacttgga
aagaaccacattagaactgatgatgtacatgcaaaagataatacaagacctggtgctaac
agtccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgagca
atcaaggaacataagatggatcaagcaattatcttctgtagaaccaaaattgactgtgat
aacttggagcagtactttatgcagcaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggtgatagaaagcctcatgagagaaagcaaaacttggaaaga
tttaagaaaggagacgtaagattcttgatttgcacagatgtagccgctagaggaattgat
atccatggtgttccttatgttataaatgtcactctgcctgatgaaaagcaaaactatgtg
catcgaattgggagagtaggaagagctgaaagaatgggtctggctatttccctggtggca
acagaaaaagaaaaggtttggtaccatgtatgcagcagccgtggaaaagggtgttataac
acaagactcaaggaagatggaggctgtaccatatggtacaatgagatgcagttgctatcc
gagatagaagaacacctgaactgtaccatctctcaggtggaaccagatataaaggtacca
ttggatgaatttgatgggaaagttacctatggtcaaaaaagggctgctggtggtggaaac
tataaaggccatgtggatgttttggcacctaccgttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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