Carlito syrichta (Philippine tarsier): 103264864
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Entry
103264864 CDS
T07836
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103264864 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103264864 (LIG4)
Enzymes [BR:
csyr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103264864 (LIG4)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103264864 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
103264864
NCBI-ProteinID:
XP_008060755
UniProt:
A0A1U7TSH0
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTPETVASHVPFADLCSTLERIQKGKGRAEKIRYFREFLDSWRRFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTPTGARG
DAGDFAIIAYFVLKPRCLQKGSLTIQQVNDLLDSVASSNSAKRKDQVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGVSQQTIFSVFHSDATELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGAFPDEGSLTPFIHNTFNIDIQSCILDGEMMAYNPDTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILSSTFMPIPGRIEMVQKKLGHTKNEVIDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLTRVGSGYTMKELYDLGLKLAKHWKAFHKRAPPSSILC
GTEKPEVYIEPCNSVIVQVKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLVSKHLYLGDDEQPQGKRRRAAPKVKRVIGIIEHLKAPNLTNVSKVSNVFE
DVEFCVMSGTNSHSKPDLESRIAELGGCIVQNPGPDTYCVIAGSENIRVRNIIASGKHDV
VKPIWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSNEQVPEEMASVIADLEYRYSWDHSPLSVFRCHTIYVDLYTVINDLSTKIEGTRLAM
HALELRFHGAKVVSCLAEGVSHVIIGEDHSRIADFKAFRRTFKRKFKILTEGWVIDSIDK
CELQEENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacagactccagaaactgttgcatctcatgttccttttgcagatttatgt
tcaactttagaacgaatacaaaaaggtaaaggacgtgcagaaaaaatcagatacttcaga
gaatttttagattcttggagacgattccatgatgcccttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggcatcaaagaaactatgcttgctaagctttatatcgaattgcttaatttacct
aaagaaggaaaagatgctcttaaacttttaaattataggacacccactggagctcgtggg
gatgctggagattttgcgatcatcgcatactttgtgttgaagccaagatgtttgcagaaa
ggaagcttaaccatacagcaagtaaatgaccttctagattcagttgctagcagtaattct
gctaaaagaaaagaccaagtaaagaagagccttcttcaacttataactcagagttccgca
cttgaacaaaagtggcttatacgaatgattgtaaaggatttaaaacttggtgttagtcag
caaactatcttttctgtttttcatagtgatgctactgagttgcataatgttaccaccgat
ctggaaaaagtgtgtagacaattgcatgatccttctgtaggactcagtgatatttccatc
actttattttctgcctttaagccaatgctagctgctattgcagatattgagcgcattgag
aaggatatgaaacaccagagtttctacatagaaactaagctcgatggcgagcgcatgcaa
atgcacaaagatggggatgtgtataaatacttctcccgaaatggatataactatactgat
cagtttggtgcttttccagacgaaggctctcttaccccattcattcataacacattcaac
atagatatacaaagctgtatccttgacggtgagatgatggcctacaacccagatacacaa
acgtttatgcaaaaggggaataagtttgatattaagagaatggtggaagattctgatctt
caaacctgttactgtgtttttgatgtattgatggttaataataaaaaactaggacatgag
accctgaaaaagaggtatgagattcttagtagtacttttatgcccataccaggtagaata
gaaatggtgcagaaaaaactaggtcatactaagaacgaagtaattgatgcactgaatgaa
gcaatcgataaaagagaagagggaatcatggtgaaacatcctctgtccatttacaaacca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcaacggactgatggat
gaattggacatcttaattgttggaggttactggggtaaaggttcacggggtgggatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtgaaaagccatctgtgttt
catactctcactcgtgtgggctctggttacaccatgaaagaactgtatgacctgggtttg
aaattggccaaacattggaaggcttttcataaaagagctccaccgagtagcattttatgt
ggaacagagaagccagaagtgtacatcgaaccctgtaattctgtcattgttcaggttaag
gcagcagagattgtccccagtgatatgtataaaactggctgcacactgcgttttccacga
attgaaaagataagagatgacaaagagtggcatgagtgcatgactctggatgacttagag
caacttcggggaaaagcatctggaaagcttgtgtccaagcacctctacttgggcgacgac
gagcagccacaaggaaaaaggcgaagagctgcccccaaggtgaaaagggttattggaatc
attgaacacttaaaagcacccaaccttactaatgtaagcaaagtttccaatgtatttgaa
gacgtggagttttgtgtgatgagtggaacaaacagccattcgaagcctgacctggagagc
agaattgcagaactgggtggctgtatagtccagaatccaggcccagacacatactgtgta
attgcagggtctgagaacattcgagtgagaaacataattgcttcaggcaagcatgatgtt
gtcaagcccatctggcttttagagtgttttaagaccaaaagctgtgtgccgtggcagcct
cgctttatgattcatatgtgtccatcaacaaaagagcattttgcccgtgaatatgattgc
tacggtgatagttattttgttgatacggatttgaaccaactgaaggaagtattctctggc
attaaaaattctaatgaacaggttcctgaggaaatggcttctgtgattgccgatttagaa
tatcggtattcctgggatcactctcctctcagtgtgtttcgatgccacaccatttatgtg
gacctgtatactgttattaatgacttgagtaccaaaattgagggaacaagattagctatg
catgccttggagcttcgatttcatggtgcaaaagtagtgtcttgtttggctgaaggagta
tctcatgtaatcatcggggaggatcatagtcgcattgcagattttaaagcttttagaagg
acttttaagagaaagtttaaaatcctcacagaaggttgggtaattgattcaatagacaag
tgtgaattacaggaggaaaaccaatatctgatttaa
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