Carlito syrichta (Philippine tarsier): 103269158
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Entry
103269158 CDS
T07836
Symbol
PCF11
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103269158 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103269158 (PCF11)
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103269158 (PCF11)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103269158 (PCF11)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103269158 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
CFIA_Pcf11
SHOCT
Motif
Other DBs
NCBI-GeneID:
103269158
NCBI-ProteinID:
XP_008064932
Ensembl:
ENSTSYG00000000140
UniProt:
A0A1U7UI15
LinkDB
All DBs
Position
Unknown
AA seq
1554 aa
AA seq
DB search
MSEQAPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEESSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKTSHQVPVQPEKSRPGPSLQIQDLKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTMSQSDIKTSKTVPSEKLNSSKQEKSKSGEKITKKELEQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLPDINKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTLTEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSVPKAGKLRQSGVKQSHMEEFTPPSRE
DRNAKRSTKQDVRDPRRMKKTEEERPQETTNQHSTKSGTEPKENIENWQSSKSAKRWKSG
WEENKSLQQADEHSKPPHLRHRESWSSSKGILSPRAPKQPQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDDFLVVVHQIRQIFQYQEGVREEQRSPFNDRFPLKRPRYED
SDKPFVDGPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTREGPTKMIFEGPNKLSPRI
DGPPTPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGAPLRFEGPIGQ
AGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG
GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPH
GQSVAALRFEGQHSQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPVPGGGLRIE
GPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQ
QVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGN
AFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRAGHYFDEKNLQSSQFGN
FGNLPAPITVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNSGAFVQNPSGALPKAYPD
NHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEAAAQPPPEEEEDQNEDQDVPDLTNF
TIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVTH
RRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAVE
SCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVEN
PLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPSEIKKENDTAESV
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaggcgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcgtcgctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggaagagaatatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaagttacgttct
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaacacatctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaagagtcttcaacgcctggcacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcaacagttactggcaaagcaaaaacaattgttagaacttcagcag
aagaagctggaacttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggatctgcaccatccaaattacatgtttcacaa
attcctcctatggcagttaaaacttcccatcaggttcctgtgcaacctgagaaaagccgt
ccaggtccatccttacaaattcaggatttgaaggggactaaccgggatccccgtcttaat
aggataagccaacattctcatggaaaggatcaaagtcacaggaaagaattcctaatgaac
acaatgagccaatctgatattaaaacaagtaaaactgtaccctctgaaaaactaaattca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaacaatta
gattctaaatctaaatctaaatctaaatcaccatcacccttgaaaaacaaattatctcac
acaaaagacttgaaaaatcaagaatctgaaagtatgaggttgcctgatataaacaagaga
gatccaaggttaaaaaaacatcttcaggataagactgatggcaaagatgatgatgtaaaa
gagaagagaaaaactgcagaaaaaaaggataaagatgagcatatgaagtcatctgaacat
agactggctggaagcagaaacaaaatcataaatggcattgtacaaaaacaggatacccta
acagaagaatcagaaaaacagggaacaaaaccagggagatcaagtactagaaaacgatca
agatctcgatcacccaagtctagatcaccaattatacattctccaaagagaagagacagg
cggtcacccaaacgaaggcaaaggagcatgtctccaacttcagtccctaaagctggaaag
cttcgccaatcaggagttaagcagtctcatatggaagagtttacaccaccttctagggaa
gacagaaatgctaagagaagtactaaacaggatgttcgagatccaaggcgaatgaaaaag
actgaagaagaacgaccacaagaaactacaaatcagcattctaccaagtcaggcactgaa
ccaaaggaaaatatagaaaactggcaaagttctaagtctgccaaaagatggaaatctggt
tgggaagaaaataaaagcttacaacaggctgatgaacatagtaaacctcctcatctgagg
catagggagagctggtcaagcagtaaaggaattttgtcacctcgagccccaaagcagccg
cagcatcggttaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcttctggtgaaattacacaggat
gacttccttgttgttgtgcatcaaattcgacagatatttcagtatcaagaaggagtgcga
gaagaacagagatctccattcaatgatcgtttcccgcttaagcgacctcgatatgaagat
tcagataagccatttgtagatggcccagcatcaagattcgccggccttgatactaatcag
cgacttacagctttagctgaagacagaccattatttgatggaccttctaggccatcggta
acgagagagggcccaaccaagatgatttttgaaggacctaataaattaagccctagaatt
gatggacctcctacaccaggttctcttcggtttgatgggtcaccaggacaaatgggggga
ggaggccctttgagatttgaaggaccacaaggtcagctaggaggcgggtgtcctttgaga
tttgaaggtcctccagggccagtaggggcgcctctgcggtttgagggcccaattggtcaa
gcaggaggaggtggttttcggtttgaaggttctcctggtctgaggtttgaaggatctgca
ggtggtttgcggtttgagggaccagggggccagccggttggtggtctcaggtttgaagga
catcgtggtcaacctgtgggtggtctaaggtttgagggacctcatggtcagcctgtgggt
gggcttagatttgataatccccgaggtcagcctgtaggtggacttagatttgaagggggt
catggtccatcaggggctgcaattagatttgatggacctcatggtcagccaggaggtggg
atcagatttgagggtcctttgctacagcaaggtgttggaatgaggtttgagggcccacat
ggtcagtcagtagctgctctgagatttgaaggccagcatagtcaacttggtgggaacctt
aggtttgagggtccacatggtcagccaggagttgggatcagatttgagggacctttagtt
caacaaggaggtggaatgagatttgagggtcctgtaccaggaggtggcctgagaatcgaa
gggcctctgggtcaaggtggtccaagatttgaaggttgccatgctttaaggtttgatgga
cagccaggtcagccatcactcttgccaagatttgatggtttacatggccagccaggtcct
agatttgaaagaactcctggtcagccaggcccacagaggtttgatggaccacctggacag
caggttcaaccaagatttgatggtgtacctcaaagatttgatggtccacagcaccaacaa
gcatcaaggtttgatattcctcttggtcttcaaggaacaagatttgacaatcatccttca
caaaggcttgaatctgtatctttcaatcagactggtccatataatgacccacctggcaat
gcttttaatgccccatcccaaggactgcagttccaaagacatgagcagatatttgattca
cctcaaggaccaaattttaatggaccacatggccctggaaaccagagtttctcgaatccc
cttaacagagctggacactattttgatgaaaaaaatcttcagagttctcaatttggaaac
tttggaaatttgcctgctcccataacagtaggaaatattcaggcatctcaacaggttctg
agtggtgttgctcagccagtagcttttggccaaggacaacaattcttaccagtacatcca
caaaattctggagcatttgttcagaatccttcaggagcccttcctaaggcatatcctgat
aatcatctcagtcaggtggatgtaaatgaattgttttcgaaactgttaaaaacaggaatt
ctcaaattgtcccagcctgattcagctacaacacaagtaaatgaagctgctgctcagcct
ccccctgaagaggaagaagatcaaaatgaagatcaagatgttccagatcttactaatttt
acaattgaagaattgaaacaacgttatgatagtgttataaatcgactatacactggtatt
cagtgctactcttgtggaatgaggtttacaacatcacagacagatgtatatgcagatcac
ttggactggcattatcgtcaaaatagaactgaaaaggatgttagcagaaaagtcactcat
agacgatggtactacagtttaacagactggatagaatttgaggaaatagctgatctggaa
gaacgtgcaaagagtcagttttttgaaaaggtacatgaagaagttgtgctcaaaactcag
gaagctgctaaggaaaaggagtttcagagtgtacctgctggacctgctggagcagttgag
agttgtgaaatctgtcaagaacaatttgaacaatactgggatgaagaagaggaggaatgg
catttaaaaaatgctattagagtagatggaaagatttatcatccatcatgttatgaagat
tatcaaaatacgtcgtcatttgattgtacaccatctcccagcaagacaccagttgaaaac
cccttgaacattatgttgaacattgtcaaaaacgaattgcaggaaccctgtgaaagtccc
aaagttaaggaagaacgaattgataccccaccagcttgtacagaggaaagcatagcaaca
ccctctgaaattaaaaaagaaaatgatacagccgagtcagtttaa
DBGET
integrated database retrieval system
