Carlito syrichta (Philippine tarsier): 103272757
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Entry
103272757 CDS
T07836
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03013
Nucleocytoplasmic transport
csyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103272757 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
103272757 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103272757 (THOC1)
03041 Spliceosome [BR:
csyr03041
]
103272757 (THOC1)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103272757 (THOC1)
Spliceosome [BR:
csyr03041
]
Complex C
Other components
EJC/TREX
103272757 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103272757 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
103272757
NCBI-ProteinID:
XP_008068425
Ensembl:
ENSTSYG00000010585
UniProt:
A0A1U7UE59
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGEGFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRIVRKRTAPE
DFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEFKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGIHATPENLISALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctctttagtttgcccgaagcccgaacgcggtttacgaagtct
accagagaggccttgaacaacaaaaatatcaagccattgttaagtaccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaggaaattataaatcattcatcatgtgaaaatgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttacttcgtatgtgc
aatgatcttctaagaagattatctaaatctcagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctctatctgagaaatctggtcttaacttgcagagtcaa
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggccag
aagcacactgaggatagagaagaaggaatggacgttgaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgactacaacctctatagaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaagagttataagttagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagctgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatcttattttattccaatatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactttggattgaagatactacaaaatcagtc
tatcaactactatctgaaaaccctcccgatggagaaggattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggttgccccagttttgtg
aaagaaagagcatcagataccaagcctacaagaatagtacgaaagagaacagcaccagag
gactttctagggaaaggacccagcaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagggaatacatg
ccaactttggaggagttctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatttaaggctgtgaacaattccaattacggctggagagccctgagactgtta
gcacggagaagccctcactttttccagccaaccaaccagcagttcaaaagtttgccagaa
tatctcgaaaacatggtaataaagctagccaaggagttaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaacaaatagaggtgtttgccaacaag
ctgggtgaacaatggaagatactggctccctacttagaaatgaaagactcagaaattagg
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctcctcgttgcctgg
caagaccaagagggaatccacgcaacgcccgagaacctcatcagtgcactcaacaagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
