Carlito syrichta (Philippine tarsier): 103277327
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Entry
103277327 CDS
T07836
Symbol
HELZ2
Name
(RefSeq) LOW QUALITY PROTEIN: helicase with zinc finger domain 2
KO
K25165
3'-5' exoribonuclease HELZ2 [EC:
3.1.13.1
5.6.2.6
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103277327 (HELZ2)
Enzymes [BR:
csyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
103277327 (HELZ2)
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103277327 (HELZ2)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103277327 (HELZ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
RNB
AAA_19
AAA_30
ResIII
UvrD-helicase
AAA_22
nSTAND3
UvrD_C_2
AAA_16
SLFN-g3_helicase
Viral_helicase1
UvrD_C
zf-C2H2_jaz
AAA_24
Helicase_RecD
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
103277327
NCBI-ProteinID:
XP_021562809
Ensembl:
ENSTSYG00000027453
UniProt:
A0A3Q0DEL3
LinkDB
All DBs
Position
Unknown
AA seq
2603 aa
AA seq
DB search
MFVGRGRPCRHGASRCQYAHSAVEMAVWEAEQLGGLRRGDLLTPLAPGDGATASQSQSTG
AQLYCSACLVTCHSQEAFENHCSSLEHAQMVAFDQAVPWEHRPPPPGLSKFKLCPKPDLC
EYGDACTKAHSAQELQEWEQRVQAAELRGQAAWQEGLVSYQERLLAEYQHSGSEVLVLAE
TVPGVHVTCNQALVHQATKRKIQHNWAFAVHSEAPLLHVALLKQDPGADFSLVAPGLPPG
QHYAQGKRFQVPDSPMDFQVGVCVQAASFGAFEQWVVFDFGHRPVLLRKLGLQLGQGHHP
GPQERPVPSQPEALEVWHTGNRNVVPGMERTAEQTALMAKYKRPALALEYSRGGQALGPI
SRANYRQRMHQFLYKEEEARQQLVAKLTLRGPVSLKMALETPALGMLFAPPGALYAEVPI
PHSLMPDTDQGFLLGRAVSTALVAPVPAPDNTVFEVRLEARASSEQALWLLLPARCCTAL
GLQPKASPVLEVQFQIDPLTFRHWHQAVDMLPEEHLVVPDLPACAPPHPRPAPPSLRGNH
KQKLAVALIAGDSPRGRRRVPPLLIYGPFGTGKTYTLAMASLEVIRQPHAKVLICTHTNS
AADIYVREYFHGYVSSGHPEAAPLRVMYTDRPPSQTDTATLQYCCLTEDRRAFRPPTEVE
LAQHRVVVTTTSQARELRVPAGFFSHILIDEAAQMLECEALTPLAYATPSTRVVLAGDHM
QVTPKLFSVARARAAEHTLLHRLFLLYQQEAHEVAQQSRLIFHENYRCTAAIISFVSRHF
YTAKGNPIHASGHVPRHPYRYPLMFCHVAGSPERDLSRTSWLNQAEITQVVETVQEVYDT
WPGCWGGREQRAICAVSHGAQVNALRQELRRRNLAEVSVGSFEILPGREFRVVVLSTVHN
RNSLLSPGAPTSEFFTDARVLNTVLTRAQSQLVAVGDAVALCSFGACSRLWESFIRECVE
QHSVCPEGLSMEQIEQGAAQRQRWAPRTRETNLGEAGGLAPAKTEPVGQTSSPVSRGITT
ATLGLEAGAAVGDLAAGESQSSPRDTEGGEADDPEDSGSDFWLLDGELNADDAILRELLD
ESQKVTVTVGEDGLLDTVARPASPHQARQHVNLPPVVLRKLLREDPEWYCRCTFLPETFE
RALAIPLDDATMGPLQVRGRLDCGMAFSGDEVLVQVLAGDRASAGRLQGRVVGVLRRKTR
ELAFVCRMDEWDPRIMVPINGCVTKIFVAEVRDPRLVPIHRLNQGXXXXXXXXXXXXXXX
XLRVPPLDAACVSKVLQKCRAEFGRAASNREDCRGLLTFTVDPQGARSLDDALSIRDLGP
RYEVAVHIADVASVMPRDGALDVEARRQGIAFYAPGKEPVPMLPASLCQDTLSLLPGQDR
LAISLFLILEKSSGQLKSLRFVPSVVRSDRQLSYEEAEQVIREHPGAGHKLPARLDSIDA
CVVAACYFSRVLRRCRLGSDYLYEQLDEDSALGFRAAHIMVKEYMVQFNRLAAEFLVGSE
RTQAVTPLRWQPTPNSHQLEAVRQKHGEWVPLSLHLSHHLHGGSLSRQRLYLLASLWEQM
QMAACTQDYERMVDLIATDDVHPFLAPAGLDLRKALGRSAFGRSGRGKQQLAGHYSLQVD
QYTWATSPLRRYLDVVLQRQILQVLGHGGTSYSARDIDGLCQDFSRRLSQAQGYQRRARS
LHLAMQLRAQPLPKMGFVVDVEAGTRSFKLLFPTSPETLPDPCPVPYRSLQLAEHPQGLE
GRPGLRLLWRRRLYSLQPSKLSLPLPGALHDPYTTAVDTALWRQLLALVEARRWPEAAAL
VREQGRKEAQRRETGRVQRSSCGQFLEVALELGSGDALQVQLGSSLQRGFLAPSLQLWIV
APGLSLCLEHAELPGDCFSYCSAGHPCPAPRGPYGSVDEYCRVWEPFCALEAATSAVTET
DSITLQHLSVSWDKAGQPELLQGTFRLEAAFLSEHGIDINFGCCFLCVRLEGLRAPLANV
SPGPSGLGPALGVDPDTYTWVAHGLTENEDQEGGVERQEGPRRVHFSIHHMAMEKVPEEV
LQPSTLFTVEVLPKQLPDVRKEEAVLGLKTASQLITSIALGQPILQPHPSRVLERQSYDL
PGGRHKLNPSQNAAVRLALEKPFSVIQGPPGTGKTVVGLHIIFWFHKSNQEQAQASSAPG
REKQPGGPCILYCGPSNKSVDVLAGMLLSWPELRPLRVYGEQAEAMEFPAPGVGSRRLLR
RGPREGRPNQTLRSISLHHRIRQASNPYSSSIKAFDVRLQGGELLPREDLLRYKSTLAKA
RKFELEQHEVILCTCSCAASPSLRNLDVRQILVDEAGMATEPETLIPLVQFSQTEKVVLL
GDHKQLRPVVKNEQLQNLGLDQSLFERYHGEAHMLDTQYRMHEGICAFPSMEFYSRKLKT
GQGLRRPPSVLGHAAKKSCPVIFGHVQGHEQSLVVSTDEGNENSKANMEEVAQVVRIVKQ
LLLGKTVAPQDVAVLTPYNAQASEISKSLLQEGILGMTVCSITKSQGSEWRYVLVSTVRT
CPRGDLDQRPTKSWLKRFLGFVVDPHQVNVAITRAQEGLCLIGDHLLLRCCPLWSRLLDF
CEAQHSLVPASQVRVQRRPAVSS
NT seq
7812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgggccgtgggcggccatgccggcatggggcatcccgctgccagtatgcacac
agcgccgtggagatggccgtgtgggaggctgagcaactgggtggcctccggcggggggac
ctgctcacaccccttgcccccggggatggggctacagcctcccagagccagtccactggg
gcccagttgtactgctctgcctgcctggtcacctgccactctcaggaggccttcgagaac
cactgttcgtccctggagcatgcgcaaatggtggccttcgaccaggctgtgccctgggag
caccgtcccccacccccagggctctccaagttcaagctctgcccaaaacctgacctctgt
gagtacggggatgcctgcaccaaggcacactcagcacaggagctgcaggaatgggaacag
cgtgtgcaggccgcagagttgcggggacaggcagcctggcaggaggggctggtgtcctac
caggagcggctgctggcagagtaccagcacagtggcagcgaggtcctggtgctggcggag
actgtcccaggagtgcacgtcacctgcaaccaagccctggtgcatcaggctacaaagagg
aagatccagcacaactgggcgtttgctgtccactctgaggcccccctgctacacgtggct
ctgctcaagcaggacccaggagccgacttctccctggtggcccctggactccctcctggc
cagcactatgcacaggggaagcgctttcaagtgccagactctcccatggacttccaggtg
ggcgtgtgtgtgcaggccgcctcctttggtgcttttgagcagtgggtggtctttgacttc
ggccaccggccggtgctgcttcggaagctggggctgcagctgggccagggccaccaccca
ggaccccaggagaggccagtacccagccagcctgaggcgctagaggtctggcacaccggc
aaccgcaacgtggtgccgggcatggagcgcacagctgagcagacggccctgatggccaag
tacaagaggcctgccctggccctggagtacagccgtggcggccaggccttgggcccaatc
tcccgagccaactatcggcagaggatgcaccagtttctctacaaggaagaggaggcacgg
cagcagctggtggccaagctgactctgcggggcccagtgtccctgaagatggcactggag
acgccagccctgggtatgctctttgcgccaccaggtgcactctatgctgaggttcccatc
ccccactccctgatgccggacacggaccagggcttcctgctgggtcgggcagtcagcaca
gcccttgtggcccccgtgcctgcgcccgacaacacggtgtttgaggtgcggctggaggca
cgggccagttcagagcaggcactgtggctactgctgccggcacgctgctgtaccgccctg
gggctgcagcccaaggcaagccccgtcctggaagtgcagttccagatcgaccctctgacc
ttccgccactggcaccaggcggtggacatgctgcctgaggagcacctggtagtgcctgac
ctgcccgcctgtgccccaccccatccacggcctgccccgccctctctgcgaggcaaccac
aagcagaagctggccgtggcactcattgcgggtgacagccccaggggcaggaggcgtgtt
cccccgttgctcatctacggcccctttggcaccggcaagacctacacgctggccatggcc
tccctggaggtcatccggcagccccatgccaaggtgctcatctgtacccacaccaacagc
gctgccgacatctacgtccgggagtatttccatggctacgtcagcagcggccaccctgag
gcggctccactccgggtaatgtacacagatcgcccgcccagccagacggacacggccaca
ctgcagtactgctgcctgacagaggatcgccgggccttccgcccgcccacagaggtggag
ctggcacagcaccgcgtggtggtcaccaccacgtcccaggcccgtgagctccgggtgccc
gccggcttcttctcacacatcctcatcgatgaggcagctcagatgctggagtgtgaggcc
ctcaccccgctggcgtatgccacgcccagcacccgtgtggtactggcaggtgaccatatg
caggtcacgccgaagctgttcagcgtggccagggccagggcggctgagcacacgctgttg
caccgcctgttccttctctaccagcaggaggcgcatgaggtggcacagcagagccgtctc
atcttccacgagaactaccgctgcacagcggccatcatcagctttgtctcgcgccacttc
tacacagccaagggcaaccccatccacgccagtggccacgtcccacgccatccctaccgc
tacccactcatgttctgccatgtggcgggcagccccgaacgtgacctgtcgaggacatcc
tggctgaaccaggcagagatcacccaggtggtggaaacggtgcaggaggtctacgacaca
tggccaggctgctggggtggccgggagcagagggccatctgtgccgtctcccatggagcc
caggttaatgcgctgaggcaggagctgaggcggaggaacctggccgaggtgtccgtgggt
agctttgagatcctgccagggcgagagttccgggttgtggtgctgagcacagtccacaac
cgcaacagcctgctcagtcccggggcaccaacctctgaattcttcactgatgcccgtgtg
ctcaacacagtgctgacccgcgcgcagtcccagctggtggcagtgggggatgctgtggcc
ctgtgctccttcggagcctgcagcaggctctgggagagcttcattcgcgagtgcgtggag
caacacagtgtctgtcctgagggcctgtccatggaacagattgagcagggtgcagcccag
agacagcgctgggcgcccaggacccgggagaccaacctgggagaggctgggggcctggcc
cctgcgaagacagagccagtgggccagacctcaagccctgtgtcccgtggcatcacaaca
gccaccctggggctggaagcgggtgcggcagtaggagacttggcggcaggggagagccag
tcatcccccagggacacggaaggtggggaggccgatgaccccgaggactcggggtccgac
ttctggctgctagatggggaactcaatgccgatgatgccatcctgcgggagctcctggac
gagagccagaaggtgacagtgactgtcggggaggatggactgctggacaccgtggccagg
cctgcatctccacatcaggcccggcagcatgtgaacctgccccctgtggtgctgaggaag
ctgctgcgtgaggatcccgagtggtactgccgctgcaccttcctgccggagaccttcgag
cgtgccctggccatcccgctggacgatgccaccatgggccccctccaggtgcggggccgc
ctggactgtgggatggccttcagcggggatgaggtgctcgtgcaggtcctcgctggcgac
agggcctccgcggggcggctgcagggccgtgtggtgggtgtgctgcggagaaagacgcgg
gagctggcctttgtgtgccgcatggatgagtgggatccccgcatcatggtccccatcaat
ggctgtgtgaccaagatctttgtggccgaggtgagggacccgcggctggtccctatccac
cgtctcaatcagggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nncctgagggtgcccccgctggacgctgcctgtgtctccaaggtgctgcagaagtgccgt
gcagagtttggccgagctgccagcaaccgggaggactgccgtggcctcctgaccttcacg
gtggacccccagggtgcccgcagtctggatgacgccctcagcatccgtgacttgggcccc
aggtatgaggtggccgtgcacattgccgacgtggccagtgtcatgcccagggacggagca
ctggacgtagaggcccgcaggcagggcatcgcgttctacgcccccggcaaggagccggtg
cccatgctgccagccagcctctgccaggacacgctcagcctactgccaggtcaggaccgc
ctggccatctccctcttcctcattctggagaaaagcagtggccagctcaagagcctgcgc
tttgtgccctctgtggttcgctctgaccgccagctgtcctatgaggaggccgagcaagtg
atcagggaacacccgggcgccggtcacaagcttcccgctcgcctggactccatagacgcc
tgtgttgtggctgcgtgctacttctcccgagtgctgcgccggtgccgcctgggctctgac
tacctctacgagcagctggacgaggacagtgcactgggcttccgtgctgcccacatcatg
gtcaaggagtacatggtccagttcaacaggcttgcggccgagttcctggtaggcagcgag
cgcacgcaagctgtcacgcctctgcggtggcagcccacgcctaatagccaccagctggag
gccgtgcgccagaaacacggggagtgggtgcccctgtcgctgcacctcagccaccacctg
cacggaggcagcctttccaggcagaggctgtacctcctagcctctctttgggagcagatg
cagatggccgcctgcacccaggactatgagaggatggtggacctgatcgccacagacgat
gtgcacccattcctggcgcctgccggcctcgatctccggaaggccctgggccgctcagca
tttggccgctccggccggggcaagcagcaactggctggccactactcactgcaggtggac
cagtacacctgggccacctcaccactgcgcaggtacctggacgtggtgctgcagcggcag
atcctgcaggtgctaggtcatgggggcacctcttactctgccagggacattgatgggctc
tgtcaggacttcagccgccggctctcgcaggcccagggctaccagcggcgggcgcgcagc
ctgcacctggccatgcagctcagggcccagcctctccccaagatgggcttcgtggtggat
gtggaggcaggcactcgctccttcaagctgctcttccccaccagccctgaaactctaccc
gacccctgccctgtcccctaccgctccctgcagctggccgagcatccccagggcctggag
ggccgaccgggcctgcggctcctatggcgccgccgcctctactcgttgcaaccatccaag
ctgtccttgccactgcccggcgccctgcacgatccctacaccacagctgtggacactgcc
ctgtggaggcagctgctggcactggtggaggcccggcgctggccagaggcggctgccttg
gtccgggagcaaggcaggaaggaggcacagaggcgagagactgggcgggtgcagcggagc
agctgcggtcaattcctggaggtggccctggagctgggcagtggggacgcgttgcaggtg
cagctgggctccagcctgcagcggggcttcctggcgccctccctgcagctgtggattgtg
gcgcctggcctcagcctgtgcctggagcatgctgagcttcctggggactgcttctcctac
tgctccgcaggccacccgtgcccggccccgcggggcccatacggcagtgtggatgagtac
tgccgcgtgtgggagccgttctgtgccctggaggcagccaccagtgcagtcaccgaaact
gactccatcacactgcagcacctgagcgtgtcctgggacaaggcaggacagccggagcta
ctgcagggcaccttccgcctggaggctgccttcctcagtgagcacggcatcgatatcaac
tttggctgctgcttcctctgcgtccggcttgaggggctgcgggcacctctggccaatgtg
tcccccggacccagtggccttgggcctgccctgggtgttgacccagacacctacacctgg
gtggcccatggactgacagagaacgaagaccaggagggcggggtggagcggcaggagggc
cccaggcgcgtgcacttctccattcaccacatggccatggagaaggttccggaagaggtg
ctgcagcccagcaccctgttcactgttgaggtgctgcccaagcaacttcccgatgtgcgc
aaggaagaggctgtgcttgggctgaagacagcgtcccaactgatcaccagcattgccctg
ggccagcccatcctgcagccccaccccagcagggtcctggagcgacagtcctatgacctc
cccggaggccgccacaagctgaaccccagccagaatgctgctgtcaggttggctctggag
aagccgttctcagtcatccagggtccgccaggcactggcaagacggtcgtgggcctccac
atcatattctggtttcacaagtcaaaccaggagcaggcacaggccagcagtgctcccggc
agggagaagcagccaggggggccctgcatcttgtactgtggcccctccaacaagtcggtg
gatgtcctggcaggaatgctcctgagctggccagagctgaggcccctccgcgtgtacggc
gagcaggccgaggccatggagttccctgcaccgggcgtgggcagcaggaggctgctcagg
aggggcccacgggaggggaggcccaatcagaccctcaggagcatcagcctgcaccaccga
atccgacaggcctccaacccctactcgtcctctatcaaggcctttgacgtccggctgcag
ggtggagagctcctccccagggaagacctcctccggtacaagtcgaccctggcgaaggcc
cggaagttcgagctggaacagcacgaggtcatcctgtgcacatgctcctgtgcggcctca
cccagcctcaggaacctggacgtgcggcagatcctcgtggacgaggcgggcatggccaca
gagcccgagacactcatccccctggtgcagttctcacagacagagaaggtggttcttctt
ggggaccacaagcagctgcgccctgtggtcaagaacgagcagctgcagaacctgggtctg
gaccagtctctcttcgagcggtaccacggggaagcccacatgctggacacgcagtaccgc
atgcatgaaggtatctgcgcctttccctccatggagttctacagtaggaaactgaagacc
gggcagggcctgaggcggccgcccagtgtcctgggccacgctgccaagaagagctgtcct
gtcatctttggccacgtgcagggccatgagcagagtctagtagtgtccacagacgaaggg
aacgagaactccaaagccaacatggaggaggtggcacaagtggtccgaattgtcaagcag
ctgctcctggggaagacagtggcaccccaggatgttgccgtcctcacgccttacaacgca
caggcctcggagatcagcaagagccttctgcaggagggcatcctcgggatgaccgtgtgc
tccatcaccaagagccaggggagcgagtggcgctatgtgctggtgagcactgttcgcacg
tgccccaggggcgacctggaccagcgacccaccaaaagctggctcaagaggtttctaggc
tttgtcgtggatccccaccaagtgaacgtggccatcacgcgggcccaggaagggctgtgc
ctgatcggagaccacctcctcctgcgctgctgtccgctctggagccggctcctggacttc
tgtgaggcccagcacagcctggtgcctgccagccaggtgagggttcagaggaggccagcc
gtgtcatcctga
DBGET
integrated database retrieval system
