Cronobacter sakazakii Sp291: CSSP291_12160
Help
Entry
CSSP291_12160 CDS
T02461
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSSP291_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_12160
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSSP291_12160
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSSP291_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
IF2_N
Kinesin
Microtub_bd
AAA_22
DUF87
DUF4686
Motif
Other DBs
NCBI-ProteinID:
AGE87015
LinkDB
All DBs
Position
complement(2543764..2545785)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRIKEGLEDGLAHQTLLGVTGSGKTFTMANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLTELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDELALRVELFDEEVERLSLFDPLTGTVDSIIQR
FTVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTVYVSATPGNYELEKSGGEIIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALG
ENIAKTKPKGRGKGRTVADAEAAELALTPKALQQKIHQLEAQMVQHAQNLEFEEAAQLRD
KLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccgttcaaactcaattccgctttcaaaccttccggcgaccagcctgaggct
atccgccgcatcaaggaagggctggaggacgggctggcgcaccagacgctgctgggtgtg
acgggctcggggaaaacgttcaccatggcgaacgtcatcgccgatttgcagcgcccgacg
atggtgctggcaccgaacaaaacgctggcggcgcagctctatggcgagatgaaagagttc
ttcccggaaaacgccgtggaatatttcgtctcgtactacgactactatcagccggaagcg
tatgtgccgagttccgatacctttattgagaaggacgcgtcggtaaacgagcacattgag
cagatgcgtctgtcggccaccaaagcgctgctggagcggcgcgatgtggtggtggtggcg
tcggtctccgctatctatggtctgggcgacccggatctctacctgaagatgatgctgcat
ctcaccaaagggatgatcatcgaccagcgcgccattttgcgtcgcctgacggagctgcaa
tacacccgcaacgatcaggcgttccagcgcggcacctttcgcgtgcgcggcgaggtgatt
gacatcttcccggcggaatcggacgagctggcgctgcgcgttgagctgttcgacgaagag
gtggagcggctgtcgctgttcgatccgctgaccggcaccgtcgattccattatccagcgt
ttcaccgtctacccgaaaacgcactacgtcaccccgcgtgagcgcattgtgcaggcgatg
gaagagatcaaagtagagctggcggagcgccgcaaagtgctgctggaaaataacaaactg
ctggaagaacagcgcctgacccagcgtacccagttcgatctcgaaatgatgaacgagctg
gggtattgctccggcattgaaaactactcgcgctatctctctggccgtggccctggcgaa
gcgccgccgacgctgtttgactatctgccggcggatggcctgctggtggtcgacgaatca
cacgtcaccattccgcagatcggcgggatgtatcgcggcgaccgcgcgcgtaaagagacg
ctggtggaatatggtttccgcctgccgtcggcgctggataaccgcccgctgaagtttgaa
gagttcgaggcgctggcaccgcagacggtgtatgtttcggcgacgcccggcaactatgag
ctggagaaatcgggcggcgagatcatcgaccaggtggtgcgcccgaccggcctgctcgat
ccgattatcgaagtgcgtccggtggcgacccaggtggacgatttgctgtcggaaatccgc
aagcgcgttgccatcaacgagcgcgtgctggtgacgacgctcaccaagcgtatggcggaa
gatttaaccgaatatctggaagagcacggtgagaaagtgcgctatctgcactcggatatc
gacaccgtggagcgtatggagattatccgcgatctgcgtcttggcgagttcgacgtgctg
gtgggtatcaacctgcttcgtgaggggctggacatgccggaagtgtcgctggtggctatt
ctcgatgccgacaaagagggcttcctgcgctccgaacgttcgcttatccagacgattggc
cgcgcggcgcgtaacgtgaacggcaaagcgattctctacggcgataaaatcacgccgtcg
atggcgaaggcgattggcgaaaccgaacgccgtcgtgagaaacagcaggcgtataacgaa
gagcacggcattgtgccgcaggggcttaacaagaaagtggtcgatattctggcgcttggc
gagaatattgcgaaaaccaagccgaaaggacgcggaaaagggcgcaccgtggcagatgcc
gaagccgctgaactggcgctgacgccaaaagcgttgcagcagaaaattcatcagcttgag
gcgcagatggtgcaacacgcgcagaacctggagtttgaagaggcggcgcagttgcgcgat
aagcttcatcagttgcgcgagctgtttatcgccgcatcgtaa
DBGET
integrated database retrieval system
