Chlorobaculum tepidum: CT1526
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Entry
CT1526 CDS
T00088
Name
(RefSeq) Rab family protein
KO
K13730
internalin A
Organism
cte
Chlorobaculum tepidum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
COR
Roc
LRR_8
LRR_6
LRR_9
Ras
Arf
MMR_HSR1
RsgA_GTPase
AIP3
GTP_EFTU
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
1006995
NCBI-ProteinID:
NP_662411
CyanoBase:
CT1526
UniProt:
Q8KC98
Structure
PDB
LinkDB
All DBs
Position
1427732..1431040
Genome browser
AA seq
1102 aa
AA seq
DB search
MSDLDVIRQIEQELGMQLEPVDKLKWYSKGYKLDKDQRVTAIGLYDCGSDTLDRIIQPLE
SLKSLSELSLSSNQITDISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLWLFGNKIS
DIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELSLSGNNISDIAPLESLKSLTELSL
SSNQITDIAPLASLKSLTELSLSSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKS
LTELQLSSNQITDIAPLASLKSLTELQLSRNQISDIAPLESLNSLSKLWLNGNQITDIAP
LASLNSLTELELSSNQITDIAPLASLKSLSTLWLSSNQISDIAPLASLESLSELSLSSNQ
ISDISPLASLNSLTGFDVRRNPIKRLPETITGFDMEILWNDFSSSGFITFFDNPLESPPP
EIVKQGKEAVRQYFQSIEEARSKGEALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPK
ESQTHGLNVVTKQAPNIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLL
DSRTDSNKHYWLRHIEKYGGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISC
KNGDGVESIAKSLKSAVLHPDSIYGTPLAPSWIKVKEKLVEATTAQRYLNRTEVEKICND
SGITDPGERKTLLGYLNNLGIVLYFEALDLSEIYVLDPHWVTIGVYRIINSSKTKNGHLN
TSALGYILNEEQIRCDEYDPAKNNKFTYTLLEQRYLLDIMKQFELCYDEGKGLFIIPSNL
PTQIDNEPEITEGEPLRFIMKYDYLPSTIIPRLMIAMQHQILDRMQWRYGMVLKSQDHEG
ALAKVVAETKDSTITIAIQGEPRCKREYLSIIWYEIKKINANFTNLDVKEFIPLPGHPDE
LVEYKELLGLEKMGRDEYVSGKLEKVFSVSKMLDSVISKEERNKERLMGDINIKLENIGN
PTIPIHQQVEVNVSQETVQHVENLQGFFENLKADILREAELEIDDPKERKRLANELELAE
NAITKMDAAVKSGKNKLKPDVKDRLGEFIDNLANENSRLRKGIALVMNGAEKVQKLARYY
NNVAPFFDLPSVPPVLLGKEKT
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgatgttatccggcaaatcgagcaggaactcggcatgcaacttgagcct
gttgacaaattaaaatggtattcaaaagggtataagctcgataaagatcagcgggttact
gcgataggattgtacgattgcggaagtgacacgctggatcgaatcattcagccgcttgaa
tcgctcaaatcgctctcggaactctcgctctccagcaaccagatcaccgacatttcgccg
ctcgcatccctcaactcactctcgatgctctggctcgaccgcaaccagatcaccgacatt
gcgccgctcgcatcgctcaactcactctcgatgctctggctcttcggcaacaagatcagc
gacattgcgccgcttgaatcgctcaaatcgctcacggaactccagctctccagcaaccag
atcaccgacatcgcgccgctcgcatccctcaaatcgctcacggaactctcgctctccggc
aacaatatcagcgacattgcgccgcttgaatcgctcaaatcgctcacggaactctcgctc
tccagcaaccagatcaccgacattgcgccgctcgcatccctcaaatcgctcacggaactc
tcgctctccagcaaccagatcagcgacattgcgccgcttgaatcgctcaaatcgctcacg
gaactacagctctcccgcaaccagatcagcgacattgcgccgcttgaatcgctcaaatcg
ctcacggaactccagctctccagcaaccagatcaccgacatcgcgccgctcgcatccctc
aaatcgctcacggaactacagctctcccgcaaccagatcagcgacattgcgccgcttgaa
tcgctcaactcgctctcgaagctctggctcaacggcaaccagatcaccgacattgcgccg
ctcgcatccctcaactcgctcacggaactcgagctctccagcaaccagatcaccgacatc
gcgccgctcgcatccctcaaatcgctctcgacgctctggctctccagcaaccagatcagc
gacattgcgccgctcgcatcgctcgaatcgctctcggaactctcgctctccagcaaccag
atcagcgacatttcgccgctcgcatccctcaactcgctcaccgggttcgacgtcaggcgc
aatccgatcaaaagattgcctgaaacaatcaccgggttcgacatggaaattctatggaat
gatttcagctcatcagggttcatcacgtttttcgacaaccctctcgaatctccgccgcct
gaaatcgtcaaacagggcaaagaggccgtccggcaatatttccagtcgattgaagaggcc
cgctcaaaaggcgaagcacttgtccacttgcaggaaataaaagtgcatctcatcggcgac
gggatggccggtaaaacctcgttgctgaaacagcttatcggcgaaacgtttgacccaaaa
gagtcacaaacgcatggcctgaatgttgtcacaaaacaggcccccaacatcaaaggtctg
gaaaatgacgatgaactcaaggagtgcctgttccacttctgggatttcggcgggcaggag
atcatgcatgcttcgcatcagtttttcatgaccagaagctcggtttatatgctgctgctc
gacagccgcaccgacagcaacaagcactactggctgcgccatatcgagaagtatggcgga
aagtcgccggtgatcgttgtgatgaacaaaatcgacgaaaatcccagctacaacattgag
cagaaaaagatcaacgagcgcttcccagcaatcgaaaaccgtttccaccggatttcctgc
aaaaacggagatggcgttgaaagcatcgcgaaaagcctgaaaagcgccgtgcttcatcca
gattcgatctacggaacgccgctggcgccgagctggataaaggtcaaggaaaagctggtc
gaagcgactacagcgcaacgatacctcaaccgaacagaagtcgaaaagatatgcaacgat
tcgggcatcaccgaccccggcgaaagaaaaacgctgctcggctacctgaacaacctcggc
atcgtgctctatttcgaagcgctcgacctttccgaaatttacgtgctcgacccccactgg
gtcaccatcggcgtgtaccgaatcatcaactcatccaaaacaaaaaacggccacctgaac
accagcgccctcggctacattttgaacgaagagcagattcgatgcgacgagtatgacccg
gcaaaaaacaacaaattcacctacactctcctggagcagcgctatctgctcgacattatg
aagcagttcgagctgtgctatgatgaaggcaaaggtttgttcatcattccatcgaacctg
cccacacagatcgacaacgaaccggagatcaccgaaggagaaccgctgcggttcatcatg
aagtacgactacctgccatcaaccatcattcctcggttgatgatcgccatgcagcaccag
attctcgatagaatgcagtggcgctacggcatggtgctaaaaagccaagatcacgaagga
gctctcgcaaaagtagtggccgagacaaaagactcgaccatcaccatcgcaattcagggc
gaaccgcgatgcaaacgagagtacctctccatcatctggtacgagatcaagaagatcaac
gccaacttcacgaacctcgacgtcaaggagtttattccgctacccggccatccagacgaa
cttgtagaatacaaagaactgctgggactcgaaaaaatggggcgagacgagtatgtttca
ggaaagctcgaaaaagtattctccgtctcgaaaatgctcgacagcgtcatcagcaaagaa
gaacgaaacaaggagagactcatgggcgacatcaacatcaaattggaaaacatcggtaat
ccaactatcccgatccaccagcaggtcgaggtaaacgttagtcaggaaaccgttcaacat
gtcgaaaacctgcaaggctttttcgaaaacctcaaggcagacatcctgcgggaagccgaa
cttgaaatcgacgatccgaaagagagaaaacggctggcaaatgaactggagctggcggaa
aacgcaattaccaaaatggacgccgccgtgaagagcgggaagaacaagctgaaaccagac
gtaaaagatcgcctcggtgaattcatcgacaaccttgccaacgaaaattcgagactgcgc
aaagggatcgcgctggtcatgaacggcgcggaaaaagtgcaaaaactcgctcgatactac
aacaacgtcgcgccattcttcgacctgccatcggtgccgcccgtgctgctgggcaaagag
aaaacatga
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