Yamadazyma tenuis: CANTEDRAFT_108753
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Entry
CANTEDRAFT_108753 CDS
T03099
Name
(RefSeq) transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cten
Yamadazyma tenuis
Pathway
cten03022
Basal transcription factors
cten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CANTEDRAFT_108753
09124 Replication and repair
03420 Nucleotide excision repair
CANTEDRAFT_108753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
CANTEDRAFT_108753
03400 DNA repair and recombination proteins [BR:
cten03400
]
CANTEDRAFT_108753
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CANTEDRAFT_108753
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CANTEDRAFT_108753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Planc_extracel
Motif
Other DBs
NCBI-GeneID:
18246058
NCBI-ProteinID:
XP_006687928
JGI:
Cante1_108753
UniProt:
G3B8K8
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MSTGDLFKVTVINHLESLDDNTQSRLYAAPATCLSIYRLLPPMAKFHIMSMLFYEKNVAI
KDLEKWSKPNTRHLQIESLERMRSLHLVQLSESGKYIRLHPIFKKNFADCLTGNQAPDAF
GNLDTTVEKHTVDLKFLDTFASTKWETILHYMVGTELSSTPSRSVLRLLKSGGLMEGNSD
YAQELKITNKGFQFLLQDINAQIWTLLLQYLDLTLELQMDAVDVLNFIFLLGSLELGKSY
SVSALSDTQIEMLSDLRDFGLVYQRSATSNKFYPTRLATTLTSDSNSLQTPSMAIDKANS
GIDSTDSKQRQESIIIETNFKVYSYTQSPLEIAILNLFVHLRTRFANMVTGQITRESIRN
ALYNGITAGQVIKFLETHAHPQMKMLAQEKLDKKIEFDASNNINTATGKSTDAPMQHKLE
ILPPNVVDQIKLWQLELDRIQTFDGYLFREFNNQIDYESLRNYASEIGVLVWSDDKKRTC
FVTKEGLKQVSNFSSRRR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaggggatttgtttaaagtcactgtcatcaaccacttggaaagtttggatgat
aacactcagtcccgattgtatgcggcacctgcgacgtgcttgtcgatatatcggttgcta
ccgccaatggccaagtttcacatcatgctgatgcttttctacgagaagaacgtagccatc
aaagatttggagaaatggagtaaaccaaataccagacacctccagatcgagtccttggag
agaatgagatccttacacttggtgcagttgtcggagtccggaaagtatattcgtttgcac
cctatcttcaaaaagaactttgctgattgtttgacaggtaatcaagctcctgatgcattt
gggaacttggacacaactgttgaaaaacatacagtggacttaaagttcttggacacattt
gcatcaacaaaatgggagaccattttgcactatatggtggggacggaattatctctgaca
cctagtaggtcagtattgagattgttaaaactgggtggattaatggaaggaaattctgac
tatgcccaagaattaaagatcacaaacaaagggtttcaattcttgttgcaggatattaat
gcacaaatatggacattattattgcagtatttggatttgactttggagttgcaaatggat
gcagtggatgttcttaatttcatatttttgcttggatctctagagctaggaaagagctac
agtgtttctgccttgagtgatactcagattgaaatgctctctgatctaagagattttgga
ttggtatatcagagatctgcgacctcaaacaagttttatccaactagattagccaccact
ttgacttctgattctaattctttacaaactccttccatggccatagacaaagccaactcg
ggtattgattcaaccgactccaagcagagacaagaatccatcatcatcgaaaccaacttt
aaagtgtattcgtatacccaaagtcctttggaaattgccatattaaatttatttgttcac
ctaagaacaagatttgctaacatggtgaccggccaaatcacaagagagtcgataaggaac
gcattatataatggtataactgccggacaggtcattaagttcttggaaactcatgcccat
cctcagatgaaaatgctagcgcaagaaaagcttgataagaagatagagtttgatgccagc
aacaacatcaacactgctactggcaaatctacagacgctccgatgcaacacaaacttgaa
atattacctcccaacgttgttgatcaaattaagttgtggcagttggagttggacagaatt
caaactttcgatgggtatttgttcagagaattcaacaaccaaatagactatgagtccttg
aggaactatgccagcgaaatcggtgtgcttgtttggtctgacgataagaaaagaacatgt
tttgtgacaaaggaaggattaaaacaagtttctaatttctctagtagaagaagataa
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