Yamadazyma tenuis: CANTEDRAFT_121315
Help
Entry
CANTEDRAFT_121315 CDS
T03099
Name
(RefSeq) ATP-dependent DNA helicase
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CANTEDRAFT_121315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cten03032
]
CANTEDRAFT_121315
03400 DNA repair and recombination proteins [BR:
cten03400
]
CANTEDRAFT_121315
Enzymes [BR:
cten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CANTEDRAFT_121315
DNA replication proteins [BR:
cten03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CANTEDRAFT_121315
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CANTEDRAFT_121315
Bloom's syndrome complex (BTR)
CANTEDRAFT_121315
FA (Fanconi anemia) pathway
CANTEDRAFT_121315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HRDC
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
18248839
NCBI-ProteinID:
XP_006686046
JGI:
Cante1_121315
UniProt:
G3B3U1
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MYQKYINYLEIKCSLLSQRYSIFESSSISLDEKNRFIREEFTPKFAKIESSLDSIKNLLP
RFALKDLSQISDVGEVEITSSVQVPGTLSEIPEVQVQNSTANVSEDDFSELEVTQVNLTK
PSRLPNDGLISLSSEPDVFVAAPSSPPRTPLRSEDDVEDEFGQHEMDGLMTPTHEIDDAD
TDLSGFVVDDVDVEDTEDISEFGSDAESIAETQFHIDQDELNDLRLSQDVADNFGINYEE
MDNDLELDNDFITTQLNDERELNYEVIEISDDEEGVSDLGGHTTFVKPEKTSQKARKPAY
DEFDEFDDEFADDVVEMGITTSIDIIREQQNRYPGCEPYIKEIYSVLNKKFKLQNFRSNQ
FEAIISLLQGRDVFVLMPTGGGKSLCYQLPSLIKIGARNQGVTIVISPLISLMQDQVQHL
KNKNIKAGMINSKIEYSEKKQIIDLFKTAQLDLVYLSPEMVNSSAQIQRIIKQLYDTKQL
NKVIVDEAHCISSWGHDFRPDYKAMSIFRQNYPDIPIMALTATANDKVRLDILHLLNMKS
PKVFKQSFNRINLYYEIRMKKAGFVEDIRDTILAKYKNQTGIIYCHSKQSCEQISMKLNQ
FGIESAFYHAGMSTEDRFEVQDSWQQERLRVICATIAFGMGIDKPNVRFVIHSFLPRNLE
GYYQETGRAGRDGLHSDCIMYYSYKDARNLQLMIQKDEEYNQATKDNHLSKLRQVIQYCE
NNHDCRRRQVLQYFNENFDPKDCQKQCDSCNNNGSEISRDFTDVSRSIIRLVQSIQNEKI
TLLYCQDIFKGSNNSKIVSKGHHQLEYHGMGSKLTKLEIERIFFHLICEGCLEEYSVIKG
GFASNYVRVGLQASQVLSGTKSIVIKFSNIIPETKATPVSGFVSAKTNKPIKLPQNNLSS
FVNASNRMHIDRCFHELNLIRNQRKIELNFQNANSILSDDSLKKLAIMLPTSKQEFKKYV
NNNDQLNYFIYFKSKLMELSRERKEKSGQKVGRNLKTNGTHSGGSQRHRGSKYFKRPGAA
KKKRSQKTMPE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagaaatacatcaactacctcgaaatcaagtgcagccttctctcccagaggtac
ctgatcttcgagtcgtcctccatctctttggacgagaaaaatcggttcattagagaggaa
tttacccccaaattcgccaaaattgaatcgagtttggatagcatcaagaacctcctccct
cgatttgccctcaaagacttgagtcagatcagcgatgtgggggaggtagagatcacaagt
tccgtgcaagttcccggtactttgagtgaaatacctgaagtacaagtccagaactcaact
gccaacgtcagtgaagacgatttctcggagctcgaagtcacccaggtcaacttgactaag
ccctcacggttgccaaacgacggcttgatcagcctatcgtccgagccagacgtgtttgtg
gcagctcctagttcaccacctcgaactcctttgaggtccgaagacgacgtggaggacgag
tttggccagcacgagatggacgggttgatgacgcctactcacgaaatcgatgatgccgat
actgacttgagtgggtttgtggttgacgatgtggatgttgaagatactgaagatatcagt
gagtttggtagtgacgcggaaagcatagcagaaacccagttccacatcgatcaagacgag
ttgaacgatctaaggttgagccaggatgtggccgacaactttggtatcaactatgaagaa
atggataatgatcttgagctcgacaacgactttatcaccacccagttgaacgatgagagg
gaactcaactacgaggtgattgaaatcagtgacgacgaagagggtgtttcggacctcgga
ggtcacaccactttcgtgaagcctgaaaagactagtcagaaggctagaaaacccgcatac
gacgagtttgatgagtttgacgacgagtttgctgacgatgtggttgaaatgggtatcact
acctccatcgacattatccgtgaacaacagaatcggtaccctgggtgtgagccgtacatc
aaggaaatctactcggtgttaaacaagaagtttaagctacagaatttccgatccaatcag
tttgaagccatcatatctttgcttcaaggtcgagacgtgtttgtgttaatgcctaccgga
ggtgggaagtctctttgttaccagctcccatccttgatcaagataggtgcccgaaaccag
ggagttacgattgtcatctccccattgatttcgttgatgcaagatcaagtccagcatttg
aagaacaagaacatcaaagcaggcatgatcaactccaagatcgagtacctggaaaagaaa
cagattatagacttatttaagaccgcccagttggacttggtgtacttgtctccagaaatg
gttaactcatccgcccaaatccagcgaatcatcaagcagttgtacgataccaaacagctc
aacaaggtgattgtggatgaagcccattgtatctccagttggggtcatgacttccgccct
gactataaagctatgagtatcttccgacagaattatcctgatatccccatcatggcctta
acggccactgccaacgataaggtccgattggacatcttacacttgttgaacatgaagagt
cccaaagtgtttaagcagagtttcaaccggataaacttatactatgagatccgaatgaaa
aaggcaggttttgttgaggatattcgggatacaatcttggccaagtacaagaaccaaacc
ggaatcatttactgccattccaagcagctgtgtgagcaaatcagtatgaagttaaatcaa
ttcggtatcgagtcggcattctatcatgctggaatgagcacggaggaccggttcgaggtt
caagattcctggcaacaagaaagacttcgagtaatctgtgccacaatagcatttggaatg
gggatcgataagcccaatgttcggtttgtgatccactcgttcttaccccgaaacctagaa
ggctattatcaagaaaccggtcgtgctggaagagatggcctacacagtgactgtatcatg
tactattcatacaaggatgctcgtaacttacagttgatgattcagaaggatgaagagtac
aaccaggccaccaaggataaccacttgagtaaattacggcaggtgatccagtattgtgaa
aataatcacgactgtaggagaaggcaagtgttgcagtatttcaacgaaaactttgatcct
aaggactgccaaaagcagtgtgattcttgcaacaacaatggcagcgagattctgcgagat
ttcacagatgtgtcccgaagtattatccgtctagtgcagtccattcagaacgaaaaaatc
accttgctctactgtcaggatattttcaagggttcgaataactccaaaatcgtcagcaag
ggccaccaccaattggagtatcatgggatgggttccaagttaacgaagctcgagatcgaa
agaatcttcttccacctcatctgtgaagggtgtttggaagagtactcggtgatcaaagga
ggttttgcctccaattatgtgagagtgggtctacaagcgtctcaggtgttatcgggcacc
aaactgattgttatcaagttttccaacatcatcccagaaaccaaagcaacccctgtgtcg
ggatttgtcagtgccaaaaccaacaagccgatcaaactccctcaaaataacctctcaagt
ttcgtgaatgcttccaatcggatgcacattgatcgctgcttccatgagctcaatttgatc
cggaaccagaggaaaatcgagcttaacttccaaaatgccaacagcattcttagtgatgac
ctgctcaagaaattggccataatgttaccaacatccaagcaggagttcaaaaagtacgtc
aacaacaacgatcaactcaactattttatttattttaagagtaagcttatggagctcagc
cgcgaaaggaaagagaaactgggccagaaggtggggcggaaccttaagacaaacggcact
cattcaggcggcagtcagcgtcatcgtgggtccaaatatttcaagcggcctggcgccgca
aaaaaaaaacgactgcaaaagaccatgcccgaatga
DBGET
integrated database retrieval system
