KEGG   Yamadazyma tenuis: CANTEDRAFT_93720
Entry
CANTEDRAFT_93720  CDS       T03099                                 
Name
(RefSeq) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cten  Yamadazyma tenuis
Pathway
cten03030  DNA replication
cten03410  Base excision repair
cten03420  Nucleotide excision repair
cten03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CANTEDRAFT_93720
   03410 Base excision repair
    CANTEDRAFT_93720
   03420 Nucleotide excision repair
    CANTEDRAFT_93720
   03430 Mismatch repair
    CANTEDRAFT_93720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cten03032]
    CANTEDRAFT_93720
   03400 DNA repair and recombination proteins [BR:cten03400]
    CANTEDRAFT_93720
Enzymes [BR:cten01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CANTEDRAFT_93720
    6.5.1.6  DNA ligase (ATP or NAD+)
     CANTEDRAFT_93720
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CANTEDRAFT_93720
DNA replication proteins [BR:cten03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CANTEDRAFT_93720
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CANTEDRAFT_93720
DNA repair and recombination proteins [BR:cten03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CANTEDRAFT_93720
   NER (nucleotide excision repair)
    Other NER factors
     CANTEDRAFT_93720
   MMR (mismatch excision repair)
    Other MMR factors
     CANTEDRAFT_93720
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 18250315
NCBI-ProteinID: XP_006686512
JGI: Cante1_93720
UniProt: G3B3P1
LinkDB
Position
Unknown
AA seq 715 aa
MAQQQSIGRFFSANGTTAQKLESKPASSNAAKRSLTPSLDSSPKRRETVAPTDDTDPTSE
EDRPTEPQMSTKEEVEKLIELGEVEHAHHKNEKLMATPSSSKLPYSKLTSVFEEIEAESG
RLKMISIISEFYLEVLQQSTVDKLVKIVYLSINRLGPDYEPDLELGLGETLLIKAISECY
GRASSKIKQDYKTFGDLGLVAQQSRSGQPTMFKPTPLDVDLVFDSLTKIAKSTGKDSQMK
KVGLINKLLTACERKTTEAKFLIRSLEGKLRIGLAEKTVLIGLAQAFTNYENHAMTPENI
TKAEDIIRESFSLIPNYEIIIKTAYEHGIFNLLDHIHLTPGIPLKPMLAKPTKSISEVLD
RFQGEEFTCEYKYDGERAQVHLLSDGSVRIYSRNSEDMSQRYPDLIAIIKDFIKVQEDSD
GTPIKSLILDCEAVAWDRQLNKILPFQVLSTRKRKDVNEKDIKVHICLFAFDILYLNGES
VVNKTLAERRELMYENLKPIEGKFCFATSRNSSNLDELQIFLDQSVKDSCEGLMVKMLNS
KESYYEPSKRSRNWLKLKKDYLAGVGDSLDLVVVGAYNGRGKRTGNYGGFLLASYNDDTG
EFETTCKIGTGFSDEDLTSLYNSLHPTEISQPKGSYVYDPSAVPDVWFEPTTLFEVLTAD
LSLSPIYKAGHQEFTKGISLRFPRFLRIREDKGVEDATTSEQVIEFYSKQASVQS
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggcacaacaacaatctataggacggttcttctccgccaatggaacaactgctcaaaaa
cttgagtccaaacccgcttctagtaatgctgctaaacggtctttaaccccatctttagat
tcaagtcccaagagaagagagactgtggctcctaccgacgatactgatcctaccagtgag
gaagataggcctactgaaccacaaatgtccaccaaagaagaagtcgaaaagttaattgaa
cttggtgaggtggagcacgctcatcacaagaatgaaaagttgatggccactccatcatct
tccaaattaccgtattccaagttaacatcggttttcgaagaaattgaagcggaatctgga
agactcaaaatgatctctatcatctctgagttttatcttgaggtcttacaacaatcaacg
gttgataagttggttaagatagtgtatttgtccatcaatagattgggtcctgattatgag
cctgatttggaactagggttgggtgaaactttgcttataaaagctatcagtgaatgttac
ggtcgggcatccagtaaaattaaacaggattataaaacttttggtgatttgggattggtg
gctcagcagtccaggtcgggccagcctaccatgttcaagcctactccattggatgttgat
ttagtgtttgacagcttgaccaaaattgccaagtcgactggaaaagactctcagatgaaa
aaggttggactcataaataagctcttgactgcttgtgaaagaaaaaccactgaagccaaa
ttcttgatcagatcattggaaggaaagcttagaataggattggcagaaaaaaccgtatta
attggattggcccaagccttcaccaactacgagaatcatgcgatgacacccgaaaacata
actaaagctgaagacataatcagagagtcgttctcgttaatacctaactatgagattata
attaaaactgcttacgaacatggaattttcaatcttttggaccatatacacttgaccccc
ggtattccattgaagcctatgttggcgaagcctactaaatccatttctgaagtgttggat
agatttcaaggagaggagttcacttgtgagtacaaatatgatggtgagagagcacaagtc
catttgttatctgatggctcggttagaatatactctcgtaactctgaagatatgtcccag
agatacccagatttgattgcaattatcaaagacttcattaaggttcaagaagatagtgat
ggaactcctataaaactgttgattttagattgtgaggcagttgcttgggacagacagtta
aacaagatcttgccattccaagtcttgtctacgagaaagagaaaagatgtcaatgaaaaa
gatatcaaagtccacatctgtttattcgcctttgacatattgtacttaaatggggaatct
gttgtcaacaagacgttggcagagagaagagaactcatgtatgagaatttgaaaccaatc
gaagggaagttttgttttgctacatctcgtaactcatcaaatcttgatgagttgcaaata
ttcttggaccagtccgttaaagacagttgcgagggattgatggtgaagatgttaaattca
aaagagtcttactacgagccatcaaaaagatcaagaaattggctcaaattgaagaaggat
tacttggctggtgttggggactctttggatttggtcgtagttggtgcctataacggcaga
ggtaaacgtaccggtaattatggtggattccttttggcaagttataatgatgatactggt
gaattcgaaaccacgtgcaaaatcggtactgggttttcggatgaagacttaacgagtctc
tacaatagtttgcatcctactgaaatctcacaaccgaaaggttcctacgtctacgacccc
agtgcggtgcctgatgtttggttcgaacctaccacattgtttgaggtgttaacagctgat
ttgtcattgagtcctatttacaaggctgggcatcaggaatttaccaagggtatttcgttg
agatttccgagattcttgagaatcagagaagacaaaggtgttgaagatgctactacgtca
gaacaagttatcgaattctactccaagcaagctagcgttcaatcttaa

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