Clostridium tetani 12124569: BN906_00309
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Entry
BN906_00309 CDS
T02905
Symbol
rho
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ctet
Clostridium tetani 12124569
Pathway
ctet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN906_00309 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctet03021
]
BN906_00309 (rho)
03019 Messenger RNA biogenesis [BR:
ctet03019
]
BN906_00309 (rho)
Transcription machinery [BR:
ctet03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BN906_00309 (rho)
Messenger RNA biogenesis [BR:
ctet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN906_00309 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
AAA_25
AAA_22
DUF5855
AAA
SAP
Motif
Other DBs
NCBI-ProteinID:
CDI48354
LinkDB
All DBs
Position
277534..279003
Genome browser
AA seq
489 aa
AA seq
DB search
MSSNDLDKLTVNELKEIAKDLEIKGVYKYKKNELIEEIKKVSPMHIEKNGVVLREKIVPK
SGKIKPEGINIEENSSRVESFQGDKRENRKKEEDNNKQEENKREKLREMINESDTAKGVL
EIIENNNYGFLRGKNYLTGPDDIYVSPSQIRRFNLQTGDEVEGKVRTPKEGEKFKALLYV
QKVNGENPEKAVRRRPFENLTPIYPQERIKLENSSSDLSSRLMDIISPIGKGQRGIVVAP
PKAGKTTLLKKIAQSISINHPDMKLIVLLIDERPEEVTDMQRSIDGEVIYSTFDEEPEHH
TKVAYMVLERAKRMVEQGQNVVILLDSLTRLARAYNLTINPTGRTLSGGLDPGALIMPKK
FFGAARNIEEGGSLTILATALVETGSRMDDMIFEEFKGTGNMEVHLNRKLQERRIFPAID
IYRSGTRKENLLLSEKEYEASFNIRRLLYDENNTQNVTEQLINMLCKTKNNDEFVEVISK
IDLSKEKNR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgtctagtaatgatttagataaactaacggtaaacgaacttaaagagatagctaaagac
ttagaaataaaaggtgtttataagtataaaaaaaatgagctaatagaggaaatcaaaaaa
gtttcccctatgcatatagagaaaaatggagttgtattaagagaaaagatagttccaaag
agcgggaaaattaaacctgaaggaattaatattgaggagaacagtagcagagtggaaagt
tttcaaggagataaaagagaaaatagaaaaaaagaagaggataacaataaacaagaagaa
aataagagagaaaaattaagagaaatgataaatgaatcagataccgcaaaaggtgttctt
gagattattgaaaataataattatggttttttaagaggtaaaaattacttaacaggacca
gatgacatatatgtatcaccatctcaaataagaagatttaatttgcaaacaggagatgaa
gttgaaggtaaagttagaacaccaaaagaaggagaaaaatttaaggcacttctttatgta
caaaaagtaaacggagaaaatccagagaaggctgttagaagacgtccttttgaaaatctt
accccaatataccctcaagaaagaataaaattagaaaatagttcatctgacctatcttct
aggctaatggatataatatctcctataggtaaaggccaaagaggaatagttgttgctcct
ccaaaggctggaaaaactacacttcttaaaaagatcgcccaaagtataagtataaatcac
ccagatatgaagttaatagttttgctaatagatgaaagaccagaagaagttacagatatg
caaagatctatagatggtgaagtaatatattcaacttttgacgaagaacctgaacaccat
acaaaggtagcatatatggtacttgagagagctaaaagaatggtagaacaaggtcaaaat
gttgttatactattggatagtttaacaagacttgcaagagcatataatcttacaataaat
ccaacaggaagaactttatcaggaggattagatccaggtgctttaataatgcctaaaaag
ttctttggagcggctagaaatatagaagaaggaggtagccttacaatattagctactgcc
ttagttgaaactggaagcagaatggatgatatgatatttgaagagtttaagggaacaggc
aatatggaagttcacttaaatagaaaacttcaagaaagaagaatattcccagctatagat
atatacagatcaggaactagaaaagaaaatttattattatcagaaaaagaatatgaagca
tcatttaatataagaagattactttatgatgaaaataatactcaaaatgttacagaacaa
cttataaatatgctttgtaaaactaagaataatgatgaatttgtagaagttataagtaag
atcgacttaagtaaagaaaaaaatagatag
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