Thermochaetoides thermophila: CTHT_0002690
Help
Entry
CTHT_0002690 CDS
T03100
Name
(RefSeq) putative transcription factor
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03022
Basal transcription factors
cthr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTHT_0002690
09124 Replication and repair
03420 Nucleotide excision repair
CTHT_0002690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0002690
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0002690
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTHT_0002690
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTHT_0002690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
18254307
NCBI-ProteinID:
XP_006690816
UniProt:
G0RZE6
Structure
PDB
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MADSDGEYVEDLSDDELHDHRPAEAGPHGARSKAGAGKKRDGKKGKKGSSRHTKAAWEDI
QRSWENVVETEDGSITIEALIEAEKRRRLMRDTTPLQRGIIRHLVLVLDMSFAMAEKDLL
PNRYLLTLNYAVDFVREYFEQNPISQMGIIAMRDGIAVRVSDMSGNPADHIERLRFWAEH
QEPQGNPSLQNALEMCRGALYHTPSHGTREVLIVYGALLSSDPGDIHETISNLVKDRIRV
TVVGLAAQVAVCAELCTRTNHGDDSTYAVALHEQHFRELFLAATIPPPATASSATDKNGA
NGNANAASTDASLLMMGFPSRTLASASHVSLCACHSRPSREGYLCTRCRAKVCRLPAECP
ACGLTLILSTHLARSYHHLFPLKGWVEVSWAEARKSKQVGCFACLAPFPLPPAPGSEKTG
KEPTQKTQGQAQQPPQERQGSSSNSNNAKKTTGISLATALPEARAVGVSESGRYKCPTCG
KHFCIDCDVFAHEVIHNCPGCQADMRPKQDASSNNIGPANGLNNVVDGDAMVLD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctgatggcgagtatgtcgaggatctttccgacgatgaactgcacgatcac
cgccccgctgaggcaggtcctcacggcgcccgctccaaggccggcgccggcaagaagcgc
gatggaaagaagggaaagaagggctcctctcgccataccaaggccgcatgggaggacatc
cagcgctcgtgggaaaatgtcgtcgagacagaagatggtagcatcacaattgaggccctc
atcgaggcagaaaagcgccgccgcttgatgcgcgacaccacaccgctgcagagaggaatc
atccgtcatctggtgctggtgctcgacatgagctttgccatggccgagaaggacttgctg
ccgaaccgctatctgttgaccctcaactacgccgtggatttcgtgagggaatactttgag
cagaaccccatcagccaaatgggtatcattgccatgcgcgacggcattgctgttcgcgtc
agtgacatgagcgggaacccggccgaccatattgagaggttgaggttttgggcagagcat
caggagcctcagggtaacccgagtctgcagaacgccttggagatgtgtcgcggtgctctc
taccacaccccttcccacggtacccgcgaagtcctaatcgtctacggcgccctgctatct
agcgaccccggcgatatccatgaaacaatctctaacctagtcaaggaccgaattcgcgtc
actgtcgtcggactagcagcccaggttgccgtctgcgccgagctctgtacccgcactaat
cacggcgatgactcgacctatgctgtcgctctgcacgagcaacacttccgcgagctgttc
ctggcggctacgattccgccgccagccacagcatcatccgcaacagacaagaacggggcc
aatggcaacgcgaatgcggcttccacagatgcgtcgcttctcatgatgggcttcccttca
cgcacactcgcatctgccagccacgtctccctctgtgcctgccacagcagaccttcgcgt
gagggatacctctgcacgcgctgtcgcgccaaagtgtgccggttgcctgctgaatgccca
gcctgtggtctcaccctgatcctaagcacccacttggcgcgctcctatcaccatctcttc
cctctgaaaggctgggttgaggtgtcctgggcagaggcacgcaagagcaaacaggttggg
tgctttgcttgcttggcgccatttcccctgcctccggctccaggctctgagaaaacaggg
aaagagccgacacaaaagacacaagggcaagcacagcaacccccgcaggagcggcaaggg
tcgtcgtcgaacagtaacaatgcaaagaagacgactggtatctccctcgcgactgctctg
cctgaggcgagagcggtcggagtcagcgaaagtggccgctataagtgccctacgtgtgga
aagcacttctgcatcgactgcgatgtatttgcgcatgaggtcattcacaattgccccgga
tgccaggctgacatgcgaccaaagcaggacgcaagcagcaacaatattggcccggccaat
gggcttaataatgttgtggatggggatgctatggtgctcgactga
DBGET
integrated database retrieval system
