Thermochaetoides thermophila: CTHT_0071520
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Entry
CTHT_0071520 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03013
Nucleocytoplasmic transport
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0071520
09122 Translation
03013 Nucleocytoplasmic transport
CTHT_0071520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0071520
03041 Spliceosome [BR:
cthr03041
]
CTHT_0071520
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CTHT_0071520
Spliceosome [BR:
cthr03041
]
Complex C
Other components
EJC/TREX
CTHT_0071520
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CTHT_0071520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
18261190
NCBI-ProteinID:
XP_006697421
UniProt:
G0SFN8
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MPSAIPADHGVPGVGAAAAFLDELLNDAESIKKTSSIEPPLKKTDFEDLPGRLSRTLGWD
LSNEDATKKTQRYAIIETAVRDTFKSLIATTPIEAPEFVRVWNLLDILSFLSDSELCDPA
LLFWIVEELLDSQTIAGCRKVFDFLESRRERITAKHLKQKQLVILRTCNELLRRLSRALD
PAFCGRVFIFMFQTFPLGDKSSVNLRGEYHLENVTTWDRDIPAQDGDKMDVDSEAKPQLD
VKALDPDALYPIFWALQESFNQPKRLFEPSNLAAFKAGLEATMATFKSIKPEQPSRARER
PEKPPEEIKHSLKKKRDDLDEELASGFNPKYLTSRDLFKLEISDLAFRRNILVQALIIME
FLLSLSPKAKEKLTSVKQPNKSVMYLDYQLSEEDTKWVLDMKERIVDYLKQGPEGPYFNR
MVETVLSRDKNWVRWKIENCPPIELPPLSPVIFDEARSTISKLATTKRPRSAPLGSLSLD
FLNDDEEDDDSGARAMQKLKDPTRYRLPELSTLKRGIEEDDLEIDMPMSEESKARAIEGK
ASKTWRALRIAAKSKLAVFDRIDDDEKIDIVFQEMSIQQQDGADREEMEDGSNGEAIWPD
DRRAIIIVDTTGGESDVVKNFLAKHCKVFVRVVQHTTRKPREGEINGKDFHFVDKQTFGM
MRDGDQFLEYSEPEEGQEGECRGTSKKLVDSIMDNDRVPVMELNQAGAQQVKDNGFDARF
ILVKDPLQDAENGELFETVVENKLEALEAAIFGSTNTAVDATAAGLGDGDGDVTMADGIE
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgcgattcccgcggaccacggcgtccccggcgtcggcgccgcagccgccttc
ctggacgaacttcttaatgatgctgagtctatcaagaagacctcgtctattgagccgccg
ctcaaaaagaccgattttgaagatcttcccggtcgattgagccgcacgctaggctgggac
ttgtccaacgaagatgctactaagaagactcagcgctatgctatcatcgagaccgccgtg
cgcgatacgttcaagtctcttattgcaacaacacccatcgaggcgcccgaatttgtccgt
gtctggaacctgctggacattttatctttcctttccgatagtgagctatgcgatccggcc
ctgcttttttggattgtagaagagctcctcgatagccagactattgctggctgccgcaag
gttttcgacttcctcgaatcgcgccgtgagcgcatcacggccaagcatctgaagcagaag
caactggtcatcctccgtacctgtaatgagctattgcggcgtttgtccagggcgcttgat
cccgcattttgcgggagagtcttcattttcatgtttcagaccttccctcttggcgacaag
agctcggtcaatctgcgaggcgagtaccacctggaaaatgtcaccacttgggatcgtgat
atccctgcgcaggatggcgacaagatggacgtggatagcgaggcaaaaccgcagctggat
gttaaggcattggatcctgacgctttgtaccccatcttctgggccttgcaagaaagtttc
aaccagcccaaaaggttgtttgaaccgagcaaccttgctgccttcaaggctggccttgaa
gctaccatggcgacattcaagagtatcaagcctgaacagccgtcacgggctcgagaaagg
ccagaaaagccacctgaggagatcaagcactccctcaagaaaaaacgcgatgatctcgat
gaggaactcgccagcgggttcaaccctaaatatctaaccagtcgtgaccttttcaagctt
gaaatcagtgacctggcatttcgtaggaacatcctggtccaggcgctcatcatcatggag
tttttgctctccctgtcgccaaaagcgaaggagaagctcacaagtgtcaagcaacccaat
aagtctgtaatgtacctagattatcaacttagcgaagaggacacaaaatgggtgcttgac
atgaaagagcgcattgtcgactacctcaaacagggccctgaaggcccctatttcaatcgc
atggtggaaactgtcctttcgcgcgacaagaactgggtgcgctggaagatcgaaaattgc
ccacctatcgagctgccaccactgtctccggtcattttcgatgaggcacgttccaccatc
agcaaacttgccacaacgaagcgtccacgatctgctccgctcgggtcactgtccctcgac
ttcctcaacgacgatgaagaggatgatgatagcggggctcgggccatgcaaaagctcaag
gatcccacccgctaccggctacccgagctgagcacactcaagcgcggcattgaggaagac
gatctcgagattgacatgcccatgagcgaggagtccaaagcacgcgccatcgaggggaag
gcaagcaagacatggcgtgcgctccggatagctgccaagtcaaagctagcagtctttgat
cgtatcgacgatgacgagaagattgatatcgttttccaggagatgtctatccagcagcag
gatggagctgatcgggaggagatggaggatggttcgaatggtgaggccatatggcccgat
gaccgccgtgcgatcatcatcgttgacaccacaggcggtgagagcgatgtggtgaaaaat
ttcctcgcgaaacactgcaaggtgtttgtacgagtggtgcagcacacaacacgtaagccg
cgcgagggcgagatcaacgggaaagatttccattttgtggacaaacagacttttggtatg
atgcgcgatggggaccagtttctggagtatagtgaaccagaggaagggcaagaaggagag
tgtcgtggcacaagtaagaaactggtggacagtattatggacaatgatcgggtgccagta
atggagctgaatcaggcgggtgcacagcaggtaaaggacaatgggttcgatgctcggttt
atccttgtgaaagacccattacaggatgccgaaaatggtgagttatttgagacagttgtc
gagaacaagttggaagctttagaagcagccatatttggctcgaccaacacagccgtagat
gctacagcagcgggcttgggggacggcgatggtgatgtgactatggcagatgggattgag
gcatga
DBGET
integrated database retrieval system
