Thermochaetoides thermophila: CTHT_0073690
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Entry
CTHT_0073690 CDS
T03100
Name
(RefSeq) ATP dependent RNA helicase-like protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthr03009
]
CTHT_0073690
Enzymes [BR:
cthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTHT_0073690
Ribosome biogenesis [BR:
cthr03009
]
Eukaryotic type
90S particles
Helicases
CTHT_0073690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Nop14
Merozoite_SPAM
DUF6264
TSA
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
18261407
NCBI-ProteinID:
XP_006697625
UniProt:
G0SHX3
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MDILKVLSRGIKPNPQKKKAQAATATPLPSAGALPRPQLFNDPVNINNRGQKRKRRDGDQ
GDGADNDSDGSESPSDVDYFAPKKPAVQTAQPKADAEAGAEEAVKKRKIKLLDEDECKQI
LRSHRLKFTVMSGLRPVEEGKKEQEDEEGKKIKKGKKDGKKEKETEKKKKKKKKEEEEEE
EEEEEEEEEASKKGEKVQIFPQPLNSFVELRTIYDIDAQLANNIHTQGFRVPTEVQMGSL
PLLLRPRMALKKTAEKHGLKVDKHADNGSVDFLAVAPTGSGKTITFLIPAIDGVLRRRAA
EGRSRDDHVLEAIVIAPTRELASQIVNEGRKLAFGTGVRVVLMKGRMKIPAQEIEGKHAK
TESESESESESEREEEEEESEEESESESESEDEGEKANKGDKEKGNKHKGRKNNANADKP
PTRVDILVTTPKILLNFLTGRSSGGTRKILPTVRSLILDEADVLLDTIFRKQTMGIWRAC
TNTDVSLTCWSATMASSIEALITKQLDRRYRQYNASRPLIRLVVGLKDTAVPNITHKLIY
TATEKGKLLAIRQLLHPVSGADSGPPLRPPFLVFTQTIERAQALFEELQYDIPIEAGGPA
RLAVLHSSLTDTARSRIMARFRAGEVWVLITTDVLARGIDFPGVNGVVNYDVPTSAASYV
HRAGRTGRAGREGGVAVTFYTKDDIPYVKSIANVIAASERQAGKDMDAPDAAVHRWLLEA
LPDVKKEERRKLKSAWERRKEHNRRQAIEASKRRKKMQMQREGKKGNDGRDEGEKEKKKK
KEEEEEEEEEWGGIED
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggacattctcaaggtcctatcgcggggcataaagccaaacccgcaaaagaagaaagcc
caagccgcgacggcgacaccgctcccctcggctggcgctctccctcgcccgcaactgttc
aacgaccctgtcaatataaacaatagaggccaaaaaaggaaaaggagggacggcgaccaa
ggcgatggagccgacaatgactccgacggcagcgagagcccgagcgacgtcgattatttt
gcgccgaagaagcctgccgttcagacggcgcaaccaaaagccgatgctgaagccggagct
gaagaggctgtgaagaagcgcaagatcaagctgcttgatgaggacgagtgcaagcagatt
ttgcggtcgcacaggctgaagtttacggttatgtctggactgcggccggtagaggagggc
aagaaagagcaagaggatgaggaggggaagaagataaagaagggcaagaaggatggtaag
aaggagaaggaaactgaaaagaagaagaagaagaagaagaaggaggaggaggaggaggag
gaggaggaggaggaggaggaggaggaggcttccaagaaaggcgagaaggtccagatcttc
ccccagcctctcaattccttcgtcgagctgcgcaccatttacgacatcgacgcccagctc
gcgaacaacatccacacgcagggcttccgcgtgccaactgaggtgcagatgggcagtttg
cctttgctgctgcgcccgaggatggcgctcaagaagacggccgagaagcacgggcttaag
gtggacaagcatgcggataatggaagcgtggacttccttgctgtggcgcccaccggcagt
ggcaagacgattacctttttgattccagccattgatggggtccttaggaggcgtgctgct
gagggacggagcagggatgatcatgtgcttgaggcaattgtaattgcgccgacgagggag
ctggccagtcagattgtgaatgagggacggaagttggcatttgggacgggtgttagagtt
gtgctgatgaaaggacggatgaagatcccggcgcaggagatcgaggggaagcacgctaag
acggaaagtgagagtgagagcgagagcgaaagcgagcgggaggaggaagaggaagagtct
gaagaggagagcgagtccgagtccgagtcggaggatgagggcgagaaggcaaacaagggt
gacaaggagaagggcaacaagcataagggccgcaagaacaacgccaacgccgacaagccg
cctacccgagtcgacatccttgtcacaacacccaagatcctgctcaacttcctgaccggc
cgcagctcaggaggcacgcgcaagatcctccccaccgtccgctcccttatcctcgatgaa
gccgacgtcctcctcgacaccatcttccgcaaacaaacaatgggcatctggcgcgcctgc
accaacaccgacgtcagcctaacctgctggtccgcgaccatggcctccagcatcgaagcc
ctcattaccaagcaactcgaccgccgctacagacaatacaacgcctctcgccccctcatt
cgcctggtcgtcggcctcaaagacaccgccgtccccaacatcacccacaaactgatctac
acggccaccgaaaagggcaaactcctcgccatccggcaactcctccaccccgtgtcggga
gctgactccggcccccccttacgtccccccttcctggtcttcacccaaaccatcgagcgc
gcacaagccctcttcgaagaactccagtacgacatccccattgaagcgggcggtcctgct
cgcttggccgtgctccactcttccctaaccgacaccgcccggtcgcggatcatggcccgt
ttccgcgccggcgaggtctgggttcttattaccacggacgtcttggcgcggggtatcgac
ttccccggcgtcaatggcgtagtcaactacgacgtgcccacctccgcagcgtcatacgtc
catcgcgcaggccgcacaggccgcgccggccgcgagggcggcgtagcagtaaccttctac
acgaaagacgacatcccctatgtcaagagcatcgcgaacgtgattgcggccagcgagagg
caggcggggaaggatatggatgcgccggatgcggcggtgcacaggtggttgctggaggcg
ctgccggatgtgaagaaggaggagaggaggaagttgaagagtgcgtgggagaggaggaag
gagcataataggaggcaggcgattgaggcgagtaagaggaggaagaagatgcagatgcag
agggaggggaagaagggtaatgatggtagggatgagggggagaaggagaagaagaagaag
aaggaggaggaggaggaggaggaggaggagtgggggggtattgaggattag
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integrated database retrieval system
