Crotalus tigris (Tiger rattlesnake): 120297770
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Entry
120297770 CDS
T08476
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03022
Basal transcription factors
ctig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120297770
09124 Replication and repair
03420 Nucleotide excision repair
120297770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120297770
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120297770
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120297770
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120297770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
120297770
NCBI-ProteinID:
XP_039176716
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRTFEHHGQVRLGMMRH
LYVIVDGSRTMEDQDLKPNRLTCSLKLLEYFVEEYFDQNPISQIGIIVTRSKRAEKLTEL
SGNPRKHITALKKAVDMTCLGEPSLYNALNLATQTLKHMPGHTSREVLVILSSLTTCDPS
NIYDLIKSLKSVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSESSLIRMGFPQHTIAQMADQDAKPSFSMAHLENSNDPGLTLGGYFCPQCRAKYCE
LPVECKVCGLTLVSAPHLARSYHHLFPLDAFEEVPVEQYMGERYCQGCQGEIRDHHVYIC
KLCHSVFCVECDLFAHDTLHYCPGCIHSHPGPSCI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaacctgaaagaaccaaacggtgggaagggggttatgaaagaacatgggaa
attcttaaagaagatgaatctggttcattaaaagctactatagaagatattctcttcaag
gccaagagaaaaagaacttttgaacatcatggacaagtacgacttgggatgatgcgccat
ctgtatgtcatagtagatggatcacgaacaatggaagatcaagatttaaaacctaataga
ttaacgtgttccttaaagctactggaatattttgttgaagaatattttgatcaaaatcct
attagccagattggcatcattgtaactaggagtaaaagagctgaaaaactgactgaactt
tcagggaatccaaggaaacatataacagctctgaaaaaagctgtagatatgacctgccta
ggagagccttctctatataatgccttaaatttagccactcaaacattaaagcacatgcca
ggacatacaagtcgagaagttttagtaatactcagcagcctaacaacatgcgatccctca
aatatatatgacctaataaagtccttaaaatcagttaagatcagagtgtctgttattggt
ctttctgctgaagttcgagtatgcactgtgcttgccagagaaactggtggaacctaccac
gttattttagacgaaagccattacaaggagctcctgatgcatcatgtcagtccaccaccg
gccagttctagttctgaaagttctcttattcgaatgggctttcctcagcacacaattgcg
caaatggctgaccaggatgcaaaaccatcttttagcatggcgcatctggaaaacagcaat
gacccaggccttacattaggaggatatttctgtccccagtgtagggccaaatattgtgag
ctcccagtggaatgcaaagtgtgtggacttacactagtgtctgcaccacatctggctcga
tcataccatcacctatttcctttggatgcctttgaggaagtcccagtggaacagtatatg
ggggaaaggtattgtcagggatgtcagggagaaatcagagatcatcacgtctacatctgt
aaactctgtcatagtgtattttgtgttgaatgtgatctttttgctcatgataccttgcac
tactgtccaggttgcattcacagccatcctggtccctcctgcatttga
DBGET
integrated database retrieval system
