Crotalus tigris (Tiger rattlesnake): 120306684
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Entry
120306684 CDS
T08476
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctig01002
]
120306684 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120306684 (USP47)
Enzymes [BR:
ctig01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120306684 (USP47)
Peptidases and inhibitors [BR:
ctig01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120306684 (USP47)
Ubiquitin system [BR:
ctig04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120306684 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120306684
NCBI-ProteinID:
XP_039196239
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MVPSEDNQLVPKEEMLWRCRQNIFDEMKKKFSQIESAADELRVLCIVQDTTNAKTVNERI
TLNLPASTPVKKLFEDIASKVGYVNGTFDLIWENGVSVANTTPLDPSSDKSVVDAGFEPG
KKNFLHLTDKDGEQPQVVVEEPGGSDDHNPDRFIGPLPREGSVGCSNDYVSQNYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYRWEFEDSEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGANQAFASVEEALHAFIQPEILDGAN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMGSF
IDIEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGIDEGICLENNSAAERISKVVS
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITHEDIKKTYGGTS
GSRGYYSSAFASSTNAYMLIYRLKDTTRNAKFLEVNEYPEHIKRLVEKEKELEEQEKRQR
EIERNTCKIKLFCMHPVKQIMMENKLEVHKDKTLKEAVEMAYKIMDLEDAVPLNCCRLVK
YDEFHDYLERSYEGEDDTAMGILLGGVKSTYMFDLLLETRQPDQSFQCYKPGEVMVKVHV
VDLKQDTVAPPISVRAYLNQTVTEFKYLISKAVHLPAETMRVVLERCYNDLRLLAVANKT
LKAEGFFRSNKVFIESSDSQDRQLPFTDSQLWKLLDRHANTIRLYVSLPEQSPGSVFRRT
IFQKASGDSGNLDAICEAGKGSLLNTKSVEAILEESTEKLKTLSLQQQQQEGDNGDSSRS
TEASDFENIESPSNEADSSASTENQELENQIQVSDTENFQSEERSDSDLNNDRSTSSVDS
DILSSSHSSDTLCNVDNAAITLANGLDSHSITSSRRSKANEGKKETWDTAEEDSGTDSEY
DESGKSRAEAQFMYFKAEPCVAEEGSGEGQKWLLIHVDKRITLSAFKQLLEPFVGVPSSQ
FKVFRIYASNQEFESVRLNETLSSFSDDNKITIRFGRALKKGEYRVKVFQLLVNDPEPCK
FLIDSVFAKGMTVRQSKEELLPQLREQCGLNLTVDRFRLRKKTWKNPGTVFLDYHVYEED
INISSNWEVFLEILEGAEKMKSMSQLAVLSRRWRPSEMKLDHFQEVVLESSSVDELKEKL
NAISGIPSENIEFAKGRGTFPCEISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
KTEEMVELTEEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaagacaaccagctggtccctaaagaggagatgctttggagatgcaga
cagaatatatttgatgaaatgaagaagaaattttcccagattgaaagcgctgctgatgaa
cttagagtgctttgtatagtacaagatactactaatgctaagacagtgaatgagcgcatc
acattgaatttgccagcttccacaccagtaaaaaaactatttgaagatatagcctccaaa
gtgggctatgttaatggaacctttgatttaatttgggaaaatggagtcagtgttgctaat
acgacaccattggatccttcgagtgataaatctgttgttgatgctggttttgagcctggg
aaaaagaattttctgcatttgacagataaagatggagaacaacctcaagtagtagtggag
gagcctggtggatcagatgaccacaatcctgatagatttataggtcctctaccaagagaa
ggttcagttggctgttccaatgattacgtcagtcagaattactcctattcgtcaattctg
aacaaatcagaaacaggatatgtgggtctagtaaatcaggcaatgacctgttatttgaac
agtcttctacaaactctttacatgactcctgaatttagaaatgcattatatagatgggaa
tttgaagactctgaggaagatccagtaacaagcatcccttatcagcttcaaagattgttt
gttttattgcagaccagcaaaaagagagcaattgaaactacagatgttacacgaagcttt
ggatgggatagtagtgaggcatggcagcagcacgatgtgcaggaactctgtagagtcatg
tttgatgctttggaacaaaaatggaaacaaacggagcaggctgatctcataaatcagctc
taccaaggcaagctgaaggactatgtaagatgcctggaatgtggctatgagagctggaga
attgatacttacctggatattccattggttattcgaccttacggcgccaatcaggccttt
gctagtgtggaggaagctctacatgctttcattcagcctgagattcttgatggtgccaat
cagtatttctgtgaacgatgcaagaagaaatgtgatgcaagaaagggattgcgatttttg
cattttccttatttgctgaccttgcagttaaaaagattcgattttgattataccactatg
catagaataaaacttaacgaccgtatgacatttccggaagagctagatatgggctcattc
attgatattgaagatgagaagtctcctcaaacagagagctgcactgatagtggagcagag
aatgaaggcagttgtcacagtgatcagatgagcaatgacttttctaatgacgatggcatt
gatgaaggaatatgtcttgaaaacaatagtgctgctgaaagaatttcaaaagttgttagt
gaaaagaattcattactatatgaattattttctgttatggttcattcgggaagtgcagct
ggcggtcactattatgcatgcataaaatcctttagtgatgatcagtggtacagtttcaat
gatcaacatgttagcaagataactcatgaagacattaagaaaacttatggtggaacatct
ggaagccgtggctactactccagtgcttttgcaagctcgacaaatgcatatatgcttata
tatagattaaaggacacaactagaaatgcaaagttcctagaggtcaatgaatatccagag
catattaaacgattagtagaaaaagaaaaggaactggaagaacaagaaaagaggcagcgt
gaaatagaacgcaatacttgcaagataaaattattctgtatgcatcctgtaaaacaaata
atgatggaaaataaactggaagttcataaagataagactctgaaggaagctgtggagatg
gcttataagataatggatttagaagacgcagttcctttgaactgctgtcgtcttgttaaa
tatgatgagttccatgattatctggaacgatcctatgaaggagaagatgacactgcaatg
ggaatcttgcttggtggtgttaaatcaacatacatgtttgatcttcttctggaaaccagg
caacctgatcagtctttccaatgttacaaacctggtgaagtcatggtaaaggttcatgtt
gtcgacctaaaacaggacacagtggctcctccaattagtgtccgtgcttatttgaaccag
acagttacagaattcaagtatctcatttcaaaggctgtacatttacctgctgaaacaatg
cgtgttgttttggaacgttgctataatgatttgcgtcttctcgctgtggccaacaaaaca
cttaaagctgaaggcttttttaggagcaataaagtattcattgaaagttcagattctcaa
gatagacagctgccgtttacagattctcagttatggaaactcctagaccgccacgcaaat
acaatcaggctgtatgtttcattaccagaacagtctcctggatcagtgttcagaaggaca
atatttcaaaaggcgagtggagattcaggcaatttagatgcaatttgtgaagcagggaaa
ggatctttacttaatacaaaatctgtagaagctatcctagaagagagcactgaaaaactt
aaaaccttgtccttacagcagcagcagcaggaaggagataatggtgacagcagcaggagc
acagaggccagtgactttgaaaatatcgaatcgccttccaatgaggcagattcatcagca
tcaacagaaaaccaggaactcgaaaaccaaattcaggtttctgatacagaaaatttccag
tcagaagagcggtcagattcagatttgaacaatgacaggagcacaagctctgtggacagt
gatattcttagttccagccacagcagtgacacattatgcaatgtcgataatgccgctata
accttggcgaatggacttgattcacacagcataacaagcagtaggcgatcaaaagccaat
gaagggaaaaaggaaacatgggatacggctgaagaggattctggaaccgacagtgaatat
gatgaaagtgggaaaagcagggcagaagcacagtttatgtacttcaaggcagagccctgc
gtcgcagaggaaggctcaggagaggggcagaaatggttgttgattcatgttgataaaaga
attacactttctgctttcaaacaactcttggagccgtttgttggagttccatcttctcag
tttaaggtctttcgaatttatgccagcaatcaagaatttgagagtgtccgattgaatgaa
actctttcatccttctcagatgataacaagataactattaggtttggaagagcactgaag
aaaggggaatacagagtcaaggttttccaacttttggtgaacgatccagagccctgcaag
tttcttatagattcagtttttgctaagggaatgactgtgcggcaatcaaaagaggagtta
cttcctcagctcagggagcaatgtgggctgaatttgactgttgacagattccgcctaaga
aaaaagacctggaaaaacccaggaactgtgtttctggattatcatgtctatgaagaagat
attaatatttcaagtaactgggaggttttcctagaaatacttgaaggagcagaaaaaatg
aaatcgatgtcacaacttgctgttctgtcaagaagatggaggccatcagagatgaagcta
gatcattttcaagaagtagttttagagagcagtagtgttgatgaattaaaagaaaagctt
aacgcaataagtggaatcccctcagaaaatattgaatttgcaaagggcagagggacattt
ccctgtgagatctctattctagagatacatcaagatttggactggaatccgaaggtctcc
acactgaatgtatggcctctctacatctgtgatgatggagcagtgatattttatagggat
aaaaccgaagaaatggtggaactaactgaagaacagagaaatgaactcatgaaaaaagaa
agcagtagacttcagaaaactggacatcgtgtgacctactcccctcgtaaagaaaaagca
ctaaaaatatatcttgatggagcgccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
