Crotalus tigris (Tiger rattlesnake): 120306907
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Entry
120306907 CDS
T08476
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120306907 (BTAF1)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120306907 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
Arm
DUF3932
Motif
Other DBs
NCBI-GeneID:
120306907
NCBI-ProteinID:
XP_039196881
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLAKVLVHIRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPQPKQERGCENQMEDTSTSDRLRFDKFDICRLLKHGASLLG
SAGAEFEVQDDTSGEVDPKERIARQRKLLQKKLGLDMGAAIGMSTEDLFNDEDLDYTPAS
SILVHKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSKDAVETNEKSNDSADG
EPEEKRRKIGNVIISQPATDSKLLVDNIPEESNEWPLESFCEEVCNDLFDPSWEIRHGAG
VGLREVLKAHGKSGGKMGDSTVEEMIQQHQDWLEDLAIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNESGVHKTVAILLKLLTQEQWEVRHGGLLGIKYALAVRQDLIET
LLPKVLPAITEGLQDLDDDVRAVAAASLVPVVESLVHLQPEKVPFILNILWDALLDLDDL
TASTNSIMTLLSSLLTYSQVQRCSNQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQISATWLTPILQDMLRHIFQFCILESNQEILELIHKVWLELLSKASLQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKARLKEKSGGKMRPSQTQTKEVVQEYIAGAESVIED
SATRDFVVMRARMMAAKLLGALCCCICDPSVNAASQEIKPAESLAQLLLFHLNSKSALQR
FSVALVICEWAALQKENKVVADAVLSRLLGVLSEHLYYDEIAIPFTRMQNECKQLISSFT
DANIDISSKVNCSVFTIDQANELVTSVFNEATSSHNLNPKVLQQLESRRQQVQMTVTETN
LEWQTLQLRVHTFTACAVVNLEQLPEKINPVIKPLMEAVKKEENTLVQNYSALCIAKLLQ
QCIARSPCPNSKIIKNLCTSLCVDPHLTPLASCPAQQQSSHENSKGSNSDRDGMHHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKATKAQIGDLPASTSGNVTTELDEAQKPYIVQRRG
AEFALSTIAKHFGDEMAVGLPHLWDTMVGSLKNSIDINNFDRKLLLEKGDGPAQELVNSL
QVFEITAASMDIRLHSLLVQHLPYLCMCLQHPSTAVRHMAARCVGVMSKIATVETIHIFL
EKVLPWLGAIDDSTKQEGAIEALSAIMEQLDVGIIPYIVLLVVPVLGRMSDQTDSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEHLIKIKAKERHFLEQLLDGKKLENYKIPVPIKAEL
RKYQQEGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRTQEYARTKMADNIP
LPSLVVCPPTLTGHWVDEVGKFCSKEFLNPLHYTGPPTERARLQHHVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCILSPLQIQLYEDFAKSRAKCDVDETVSAASVTEETEKPKLKATG
HVFQALQYLRKLCNHPALVLTTHHPEHKRITEKLAAENSSLRDIQHAPKLSALKQLLLDC
GLGNGGSPESGTETIVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMKDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENTSLQSMGTDQLLDLFTLDKDGKT
EKSDGATSLSGKTTMKSVLENLGELWDQEQYDSEYSLEKFMHSLK
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccagacttgatcgcctctttatcttattggacactggcacaacaccagtt
acaaggaaagcagctgcccagcaacttggggaggttgtaaaacttcatccacatgaattg
aataatctcctggctaaggtattggtacacataaggagtacaaactgggatacccgcatt
gcagctggacaagctgtggaagccatagtaaaaaatgtacctgaatggaatccaactcca
caaccaaagcaagaacgtggctgtgaaaatcagatggaagatacctctacttctgatcgg
ttacgttttgacaaatttgatatttgtcgacttttaaagcatggagcttctcttcttggg
tctgctggtgctgaatttgaggttcaagatgatacatctggtgaagtggatcctaaagaa
agaatagcccgacaaaggaaattgcttcaaaagaaacttggccttgatatgggagctgca
attggaatgagtacagaagatttgttcaatgatgaggatttggactacacaccagcttca
tcgattctggtacacaaacaacctactctccaagctgcggaattgattgattcagaattt
cgagctggaatgagtagcagacaaaaaaataaggctaaaagaatggccaagttgtttgca
aaacaaagatcgaaagatgcagtagagaccaatgaaaaaagcaatgacagcgctgatggt
gaaccagaagaaaaaagaagaaaaattggaaatgttatcatcagtcaacctgcaactgac
tccaaacttttagttgataatattccagaagagagcaatgaatggcctttggaaagtttt
tgtgaagaagtgtgtaatgatctctttgatccatcctgggagatccgtcatggtgcaggt
gttggactgagagaggtactcaaagctcatgggaaaagtggcggtaaaatgggagacagt
actgtagaagagatgattcaacaacaccaagattggctggaagatctggctatcagactt
ctttgtgtatttgctttagacagatttggtgattttgtttcagatgaagtagtggcacct
gtgcgagaaacttgcgctcaaactttgggagtagtgctgaaacatatgaatgagagtgga
gttcataaaactgttgctatcctgctaaaattacttacacaagagcagtgggaagtaagg
catggaggccttctagggataaagtatgctttagcggttcgtcaggatctaattgaaaca
ttactacctaaagtcttgcctgcaatcactgaaggactacaagatttggatgatgatgtt
agagccgttgccgcagcatctctggtgccagtagtagagagtcttgtccacctccagcca
gagaaagtaccttttattcttaatatactctgggatgcacttctagatttagatgacctg
acagcttccacaaacagcatcatgaccctcctttcatcccttttaacttattctcaggtc
caaagatgcagtaatcagcagtcactcacagttctggtaccacgtgtgtggccatttctt
catcacacaatatcttctgtccgaaaagcagcattagaaactctgtttactctgttgtct
acacaagatcagatttctgcaacctggctaactcccattttgcaagacatgttaagacat
atctttcagttctgtattttggaaagtaaccaagaaattttagaattaatacataaggtg
tggcttgaattgttgagcaaagcttctttacagtatgtggtagctgctgcatgtccatgg
atgggagcttggctctgcctgatgatgcagccttctcatttgcctattgatttaaatatg
ttgctggaggtgaaagccagactgaaggaaaagtcaggtgggaagatgcgtccaagtcaa
acccagaccaaagaagtggtacaagaatacatagctggtgccgaaagtgtcattgaagat
tcagcaactagagattttgttgttatgagagctcggatgatggcagcaaaattactcgga
gcactctgctgctgtatttgtgatccaagcgtgaatgctgcttcccaagaaatcaagcca
gctgaatcacttgcccagctcttgcttttccacctaaattccaagtcagctttgcagagg
tttagtgttgcattagtaatctgtgagtgggcagccttgcagaaggaaaataaagtagtg
gctgatgctgtcctgtcacgcttacttggtgttctttctgagcatctttattatgatgaa
attgctattcccttcacccgaatgcagaatgaatgtaaacaacttatctcttcattcacc
gatgcaaacattgatatttccagtaaagtaaactgcagtgtatttacaatagatcaagct
aatgaattggttacttctgtttttaatgaagccacatcatctcataatctaaatcccaaa
gttttacagcaattagaaagcaggcgacagcaagttcaaatgacagtcacagaaacaaac
cttgaatggcaaacattgcagctgagagtacatacatttactgcttgtgctgttgtaaat
ttggagcagcttccagaaaaaataaatcctgttataaaacctttgatggaggctgtgaag
aaagaagaaaatacactagtacaaaattattcagctttatgcatagcaaaattgcttcag
caatgtatcgcaaggtctccctgtcccaattcaaaaatcatcaaaaatctttgcacctcg
ctttgtgtggatccacatcttactcctttagcatcctgtccagcacagcaacagagcagc
catgaaaactcaaaaggttctaattctgacagagatgggatgcatcatacagttaccaag
cacagaggtataattacactctataggcaccaaaaagctgcatttgccatcacaagccga
cggggtccaacaccaaaggccaccaaagcccaaattggagatttgcctgcaagcactagt
ggaaatgtaacaacagagcttgatgaagctcagaagccctacattgtacagcgcagagga
gctgaatttgctttatccactatagcaaagcattttggtgatgaaatggcggtaggcttg
ccacatctttgggatactatggtcgggtccttaaagaacagtatcgatataaataacttt
gatcgaaagttactcttggaaaaaggagatggaccagctcaggaactggtgaattctttg
caagtttttgaaataactgcagcttctatggatattcggcttcactctctgttagtacag
cacttgccttacctttgtatgtgccttcaacaccccagcactgcagtgaggcacatggct
gctcgttgtgtgggtgtaatgagcaaaatagctaccgtggaaaccattcatatttttcta
gaaaaggttcttccttggctgggagcgatagatgatagtaccaagcaagaaggtgcaatt
gaagctctcagcgctataatggagcaattagatgttggaattattccctacatagttctg
cttgtggttcctgttctgggcagaatgagtgatcagacagacagtgtccgtttcatggct
actcagtgctttgcaactctgattagattgatgccacttgaggctggtattccagatcca
ccaaatatgtctgaacatttaattaaaataaaagccaaggaacgccatttcctggaacaa
ttattggatgggaaaaaactagaaaattataaaattccagtaccaattaaagcagaactc
agaaaatatcaacaggaaggtgtgaactggttggcttttctcaacaaatataaacttcat
ggtatcctgtgtgatgatatgggcttaggaaaaaccctgcagtccatctgtattcttgca
ggagatcactatctcaggacccaagagtatgcaagaactaagatggctgataatattcca
ctcccatccttggttgtgtgcccgcccaccctgacaggtcattgggtggatgaagtgggc
aaattttgttccaaagaatttttgaatcctttgcactatactggccctccaactgaaagg
gcaaggttacagcaccatgtaaaaagacacaacctaattgtagcttcttacgatgttgtg
agaaatgacattgattttttcagaaatattaaattcaactactgtattcttgatgaagga
catgtcatcaaaaatggaaaaacgaagctatcaaaagctataaagcagttgactgccaat
tacagaataatactctctgggacaccaatccagaacaatgtcttagaattgtggtcacta
tttgattttcttatgccgggatttttgggtaccgagcgccagtttgcagctcgttatggc
aagcccatattagcgagtagagatgctcggagctctagtcgagaacaggaggcaggtgtc
cttgcaatggaagcattacacaggcaagtcctgccatttttattacgaaggatgaaagag
gatgtgttacaagatctcccaccaaaaattattcaagactattattgtattctcagccct
ctccagattcaactttatgaagattttgccaagtctcgtgccaaatgtgatgtcgatgaa
acagtttcagcagcttcagtcactgaagagactgaaaaaccaaagcttaaagctacagga
catgtatttcaggcactgcagtatttaaggaaattgtgcaaccacccagcactagtttta
accactcatcacccagaacataaaaggatcacagagaagcttgcagcagagaattcttct
cttcgtgacatccagcatgcacctaaactctctgctttaaaacagctattacttgactgt
ggcctaggaaatggtggctctccagagagcggcaccgaaacgatagttgcgcaacaccga
attcttatcttctgtcaactgaagagcatgctggacatagtagaacatgaccttctgaag
cctcacttgccctctgttacctatctgcgattagatggcagcataccagctggtcagaga
cactcaatcgtctcacggtttaacaatgacccatccatagatgtgctgttgcttactact
catgtgggtggactgggccttaatttaactggagctgatactgtggtatttgttgaacat
gattggaatccaatgaaagacctccaggcaatggaccgagcacatcgtattggacagaaa
cgtgttgttaatgtttatcgattgataacaagaggaactttggaggaaaaaataatgggt
cttcaaaaattcaaaatgaatattgcaaatacagtgatcagtcaagagaatactagtctg
cagagcatgggaacagatcagcttcttgacctcttcactctggataaggatggaaaaact
gaaaaatcagatggtgccacttctctttctgggaaaacaactatgaagtcagtccttgaa
aatctcggagaactttgggatcaagaacagtatgattcagaatatagcctagaaaagttt
atgcactcactcaaataa
DBGET
integrated database retrieval system
