Crotalus tigris (Tiger rattlesnake): 120309207
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Entry
120309207 CDS
T08476
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120309207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120309207
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120309207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
120309207
NCBI-ProteinID:
XP_039202134
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MSRGGPAPGWGWWPPSRRRGRQQQRTRRRVAAGSGFLEGAWAFPVAVLAVAGLAAASLSL
LVLVLGLSGAALSLIVAAVAAGSWIASSGLGGSKDRRGTPLLTHRISFASKSSVTVLANG
GPSMSYSSPDLLVPERRRGQVCGDHLSPSTRFMLTPRRRYPIQQAQYAALGTLPSICWDE
YRRKNRLSIHHSSMAHSPVTVKIARPESNIGRSPLLEQLVSPVAFSSASNTILDPCAKET
VLNALKESRKRAVEEEEEEQNFPSGQENKKRRHDSTGSGHSAFEPLVANGAPASLVPMPG
SLKRGLASSHCLEDCSSKRSRTSSLSSVNSLYVGGIPSSLRNAIASSYSSTRGLSQLWKR
TGPSSSPLSSPASSRSQTPERPNKKARYPSSNITEEEPQKSNLQMPVTADKEMQEEKISD
SPLKNKCNYVSSPSSSGSNGKRKRKIQLLSAHHGDNFALQPPPPQLGYTVTPEDLDAEKK
ATLQWFNKILEENIDSTPSPPVETTSSSQTLNFSLMSTKPTPVSLPISTAATNPLLESLK
NMQEGKGSSAQAAKTVPGTKGSPQIPAFSASLDLSSSVPVTSPEAPKPLALNVPVPLSTA
SPSSGTSLPTSSTGTLVTASSEPGHTPSRPSSAPKPSILFGILTSPPVDKPSAATTPSSS
APSTVPIFKPVFGSPAKSENFSFSPSSTSVVSATAQSVPSLAPPVAPSSTFKPIFGPLST
PATAILPTTTSSSPFTFSQAPQPAAASGLPAINASSNLGLPILSEATAATSVSSPGTASV
TFVSMSKPVFSFGPGIPSSATAPSNSSSNSTPATVVSTLASQPLLFGAAPSASTAAMPLF
QFGKQATSTGATVNLLAPSSTTNSAPTVTAAATTTTNTGFSIFSGGSSSSTQASSAPSAT
TQGPLTFGSCTSAFSSTFGAASKPPPPYAAVTSQLAFDAGVPEGQQAALKPPAAGPLNFG
TPFSFTGSVAQPAAQPAFGSSTQTAFGGSGPLASFGAKNTSQPAFGVASSIFSFGTATTS
STQTTSTGSSVFGGSAPAPFTFGVSNPQGVAGSAFGVGASATGTGVPTVGFGFGSGQSGA
ADGVTPFGTSLAQNPLGTQNQNSAFAFNIPSTPESKPAFGGTPTPTFGQSTPTPGGGTVG
SCNFSLGTPITPTFGGVTPTAFGIPTFSIGAGSKTGTRQRLQARRQHTRKK
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggcggcccggcgcccggctggggctggtggcctccgtcgcggcggcggggg
cggcaacagcagcggaccaggagaagggtggctgccggttccggttttctggagggagcc
tgggcctttcccgtggcagtgctggcggtggcgggactggcagcagcgtcgctctctttg
ctggtgctcgtgttgggcctctctggagctgctctctccctgatcgtggcagcggtggct
gcgggatcctggatagcatcctcgggattaggcggcagcaaggaccggagggggaccccc
ttgctgacccaccgcatctcctttgcttccaagagtagcgttacggtcctcgccaacggg
ggcccctccatgagctactcctcgcccgacttgctcgtgcctgaaaggaggcgggggcag
gtttgcggggatcacctgagtccatcaactcgttttatgctgactcctcggcgacgctat
cctatccagcaagcccaatatgctgcgttgggaaccctgccttcaatttgctgggatgag
tatcggcggaaaaacaggctatctattcaccattctagcatggcccacagccctgtaaca
gtgaaaattgctcggccagaaagcaacattggccgttctccactgttggagcagttggtt
tctcctgtggctttctcttcagcatctaatactatcctggatccatgcgcaaaagaaact
gtcttgaatgctctcaaagagagccggaagagagctgtggaggaagaagaggaggagcag
aactttccaagtggtcaggaaaacaagaagaggcgccatgacagtacgggaagtggtcat
tctgcatttgagcctttggtggccaatggagcacctgcatctcttgtgcccatgcctggc
tctctgaagcggggacttgcttcttcccactgcctagaagattgctcctccaagagatcg
cgcacttcttccctcagttctgtgaacagtctgtatgtgggtggtataccaagctctctc
cgcaatgctattgccagctcatacagctccaccagaggtctctcacagctatggaagaga
acgggaccaagttcctctcctctttccagcccagcatcctctcggtctcaaacacctgaa
aggcctaacaagaaagcaagatatcccagctccaacatcactgaagaagagcctcagaaa
tccaacttgcaaatgcctgtgacagcagacaaagagatgcaggaagagaagatttcagac
tcgcccttgaagaataaatgcaactatgtgagttcaccatcttcatcaggaagcaatggc
aagcggaagcggaagattcagctactttcagctcatcatggagataattttgccttgcag
cctccaccacctcagctgggctatacagtcaccccagaagacttggatgcagagaagaaa
gcaacactacagtggttcaacaaaatcttagaagaaaacattgattccaccccaagccca
cccgtggagactacctcttcatctcaaactttgaacttttcactgatgtccaccaaacca
acccctgtgtcgttgcccatctctactgccgcaaccaatcctcttctggagagcctgaag
aacatgcaagaaggaaagggctcttcagcacaagcagccaagacagttccagggactaaa
gggagtcctcagataccagccttctctgcctcgctggatttgagctcctctgtgccggtg
acatcccccgaggcacctaagcctctggcactcaacgtacctgtccccctgtccactgct
tctccttcttcaggcacttccctgcccaccagtagcacaggcactttggtgacagcttct
tctgagccgggccacactccatccaggccctcgtctgctccaaagcccagcatcctcttt
gggatcctcaccagtcccccagtcgacaagccctcagctgcaacaacgccatcttcttct
gcgcccagcacggtgcctattttcaaaccagtgtttggcagcccagcaaaaagtgagaac
tttagcttctccccaagtagcaccagtgtggtttctgccaccgcgcaatctgtgccttct
ttggcacctcctgttgctcccagcagcacattcaagcctatcttcgggccactgtccaca
ccagcaactgctatcctgcccacaaccacatcatcatctcccttcacattcagtcaggcc
cctcagccagcagcagcatctggccttcctgccattaatgcctcaagcaatctagggctc
cctattctctcagaagccactgctgccacctcagtgtcatcccctggaacagcaagtgtg
acgtttgtctccatgagcaaacctgtgttcagttttgggccgggcattccatcctctgcc
actgcccccagcaacagcagcagcaatagcactcctgccactgttgtctccacattggca
tcccagcccttgctatttggggctgcacccagtgccagcacagctgccatgcctcttttc
cagtttggcaagcaagctacttctacaggcgccactgtcaatctcttggcaccctccagc
accactaactctgctcccactgttactgctgctgccacaaccacaaccaatactggcttc
agcattttcagtgggggcagcagcagttccacacaggcttcttcagcaccatcagccacc
acacagggtccactgacctttgggtcttgcacctctgcattcagcagtacctttggggcc
gcctcaaaaccaccccctccatacgctgcagttacaagccagctggcttttgatgcaggt
gtccctgagggccagcaggcagctctcaagccaccggctgcaggaccactgaactttggg
actcctttcagcttcactggctcagtagcccaacctgcagcccagccagcatttggtagc
tctacgcagaccgcttttggagggtctggccctttggcatcttttggagccaaaaatact
tcccagccggcatttggagttgcatcgtccatcttttcttttgggacagccaccacgtcc
agcactcagactacaagcacaggaagctctgtgtttggaggttcagccccagctccattc
acctttggggtatcgaatccccaaggtgtagcaggcagtgcttttggcgttggtgccagt
gctacaggcacaggcgtgcccacggttggatttggttttggtagtgggcagagcggagct
gcagacggagtgacaccctttggaacttccttggcacaaaaccctctgggtacccagaac
caaaactctgcctttgctttcaacatcccaagtacacctgagagcaagccagcattcgga
ggaactcccacacctacatttgggcaaagtacacctactccaggtggtggcacagtaggg
agctgcaacttttcccttggaacacccatcacccccacctttggaggagtgacacctact
gcttttgggatacccaccttctccattggagcaggatccaagacaggaacccgccaacgg
ctgcaggcccggaggcagcatactcgtaaaaagtaa
DBGET
integrated database retrieval system
