Crotalus tigris (Tiger rattlesnake): 120315662
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Entry
120315662 CDS
T08476
Symbol
TNRC18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
120315662
NCBI-ProteinID:
XP_039216322
LinkDB
All DBs
Position
Unknown
AA seq
2932 aa
AA seq
DB search
MDGRDLGAPRAVHVPSPLLSGLAMESHVAAAAAAAAGAARLAPLATPPLPPGKYLAAPGL
NLHSHPGFSHLPSGLYPSYIPLSHLEPHGSGTPLLAQLNQHSLFETPKDGFYLAGHAGQA
ALHPQATPSRAVPNPTSSALLHEKDFGHPHRTSKDSPKELGGKDRSYRGNLSLSLAKKDA
KLREESRPHSVVDLTQDTKPDNERKTNGFEKAVKVGERLSPFLAEQLPNRGIFSGEPKSK
NPLQTSSLSNCNTGGSAQGSELDHCPKDLSRHDENVRPPPYVFSDRLKKVDSAVSSVANL
HVACSCPSPAQPGKLPPPSAFPPQPIHPNMYTIFPLTKDSGREHKVIAPTFMPSLEAYDE
RKGPIQIASQARDNTKLKEKEVPAANRVGVLQAVPKRCLADASHNLLAQEFSLHGDAKRM
EVLREKSSVIRANSMFLKKQGASETFLNRPRLRSPENREFLPLKDLPKAGLEAEHHSCER
DRFQRPGCKEAAKIYGTLDTSSSSSSSSSRQHLDPSQQLKPPEQKWKPFEMGNFATTQMA
VLAAQHNHANRVEEEVKKTYLEPSNLQRSSVVGARSVTDGLHPPPSHGEGSAMQSLIKYS
GSFAKEASSRQGAGKKTPFGGLGNMKLDPGRQPSPKVQQLLSHQAGKQLKKEPERPESAK
SFGRESIGSQGEVEVRHLPVGIAVAVARQKDNSSGGKLGLVDRDRSLSLSNVKGHGRLDE
DCGDDRPRLRENHLLASRLERDQEKLLRESKELADFARIHPATCATSGLNSNLMVTGGPP
LTGSGRWTGDPTPHLVTHPWLPRSSSSSMWLTGHPYGHPSLHQGMTPAFPSGMGGALPSA
YQFARDPQSGQLVMIPSEHLTHFAELMDRAPPLWPAIYSPTRSSLQHAHQLQLLSHQQLI
RQHELYLLQQQAAHAQLVERLKASEQRAEMEEKITKRNLDNAKSGLPTSASSLLHRKPPV
LSPSTSVSYNKAISPPPLSPRSSSVSLLKAEVIQKLEEPPSQPTYSYPTTPITHPSSPPP
ASPPPAPNLPPKEEEETENMEKKELELEKETSASYQTLFPEIPSGYPFQSLPDSFRRHYP
YLLQPTATSDADELGSSVPLPTSSPEHLTLSPEVKPIHLSPSKIVKPIQAVEEEESLEER
VKTEMEMDNSQEEGSCEQDMEVLGMATSVALPVEDADGCDLQLHHGKTLRTSDHEEVLED
CQAAYPEMSCSVEMDTQADETNDSETCPIHDYGGSLLQRDTEQSEIGLVPQPEKSPLAVE
MPHISSPSNKEFPSMLQEEGEPTVEAPIYRNEMYSCPLPPLDIKMDDPLAGMNALAAAAE
LPQACSLLTNSDGGVTQEAVVNLEVSSSLSPEHTFLHGITLLSEIAELELEKRQQETEGP
ENFSAHPALESLLAAGTQMLMEVLSTPFMDSLKNIRLPRELDPNKKYSWMQKKDEPMYSI
KSSIGSMDAMELDYRMKLAELQRRYKEKQRELAKLQRRRDSEEKHDEKNRSLAKRGPGRP
RKRNHGSSALLPPKERGKSDGRSGKLSKSLSLSEDSEMGDGREEKHRGLLLDEEEEGETR
SGKTKTRHRSWDEQDLLMNFSSELKIKKKKVASDQEQLVSKLDKALSLTRRSKLKSPFKF
VDRSRGRQKNGGYYNNRYLSPHGALFGKDAKNNLAKSLSFSLKASKEGKNKMAVKMKKLE
VGLKMKGHHLKVSNSPAISEVSSYSYNTDSEEEEESLKDEWSSHSPTSARMRPSSLYSVM
APKCSRISDIFKAGKKSITSTRTLKSKMAANRKREFCLLSREAKAGSSYSDSSEDSFDQD
SSSEEEDEEEEEDDDDNNDEEEEMEGYGAAVNERLSPSALDESGLGLLARFAASAIPSPI
IVPSVSIVQLEAKQKAKKKEERQSLMGTEFEYTDSESDVKIRKKSPAGLLHGKKGSLEQG
PTAGPMETSSGNSLDKTKMVTEKSRKLKKFRSPKELSFEFGLEVNDDDAWNRRRSERIFL
HDATTSAGLASSTPASSIPVSKSGRCLKGTLLSPKKEGNRGKERKELSKKKKNKEGAVCS
SAGSSSSSSSSSLLSPLGIASSLPDLHASLASSLTSSKKNKGKAKTKEAKKETRGKGGAV
SKLMESMAAEEDFEPNQDSSFSEDENIPLNLLLERPLTPAPRSCIIDKDELKDGLKVLIP
MDDKLLYAGHVKTVHSPDIYRVVVEGERGNRPHIYCLEQLLQEAIIDVKPPSVRFLPEGA
RIAAYWSQQYRCLYPGTVVRGVHDQEEDGDLITVEFDDGDTGRIPLSHIRLLPPDYKIQC
AEPSPALLVPSMRRRSRKSSKDLGEGNGVESEEAGAKGKGRGRKPNKKQKTEESVLADQT
ITGEILANSSIGSELPICKPAAKGSQKIQSVPSRTPPAPAEDKHHSKTGKGKISSKLHGS
VPTTFQTPVFGNVRGNEPYPGPFGPSSSSSGKVKSKKGKSTEEGQEFGSAPKAQRKIPDS
EILIKLDHEGVMSPKTKKTKEAMRMLGESNLASRRDAKNLLGLGYSAMGCPNPKQKSSRS
KTVMEGEPPPNFGSTFENSADPPSSKAQEDGGELAPARDESESSGSSSDSEGEEETEKNG
GGAQDSSSASSRASTPMSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSASSSSSSSSSSS
SSSSSTTDEDSSCSSEDEAAETQPSASSTQPTSPAKPTKASGKSPSSSHSRNPKQPQQQV
VQKQQPSGNKNRCKKREGIHLPTTKELAKRQRLPSVENRPKIAAFLPARQLWKWFGNPTQ
RRGMKGKARKLFYKAIVRGKEIIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGNNMVVRV
KWFYHPEETNPGKKLNEGKRWDQKSVRTLSAALQASSQRKDFMERALYQSSHVDENDVQT
ISHKCLVVDLEQYEQMLKTKKYQDSEDLYYLAGTYEPTTGMIFNTDGVPIVC
NT seq
8799 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagagacctgggggctccccgcgccgtccacgtcccctcgccgctgctctcc
gggctggccatggagagccacgtcgccgccgccgctgccgccgctgccggagctgcgcgc
ctggctcctttggcgacgccgccgctgccgccgggtaaatacctcgccgccccgggcctc
aacctccattcccacccgggtttctcccacttgccaagtggtctctacccctcatacatt
cctttgagtcacctggaaccccacggcagcgggacccccttacttgctcagttgaatcag
cacagcctctttgagaccccaaaagatggattttaccttgctgggcacgcaggacaagct
gccttgcacccccaggccaccccgtccagggcagtccccaaccccacctcaagcgccctg
ctccacgaaaaggactttgggcatccgcacaggacctccaaggacagccccaaagagctc
ggtgggaaggaccgatcttaccggggcaacctctccttgtccctggccaagaaggacgcc
aagctgcgtgaggagtcccggcctcacagcgtggtggatctcacccaggacaccaagccg
gacaacgagaggaaaacgaacggatttgagaaggccgttaaggttggggaacgcttgtct
cccttcctggcggaacagttgcccaaccgggggatcttcagcggagaaccaaagtccaag
aacccacttcagacctcttcactcagcaactgcaacacgggtggaagcgcccagggctcg
gagctggaccactgtcccaaggacctcagcagacatgacgagaatgtaaggcctcctcct
tacgtcttctccgaccggttgaagaaagtcgactctgcggtcagttcggtggccaacttg
cacgtggcctgcagttgtccttctccagctcaacccgggaagctccccccgccctcggcc
ttccctccccagccgatccaccccaacatgtacaccatcttccccttgaccaaggactcc
gggagggagcacaaggtcatcgcacccaccttcatgccttcccttgaggcttatgacgag
agaaaaggccccattcagatagcttcccaagcccgggacaacaccaaactgaaggagaag
gaggtccctgctgccaaccgagtgggggtcctccaggcggtgcccaagaggtgtctggct
gatgcttctcacaaccttttggcccaagagttctccctccatggagatgccaagcggatg
gaggtcttgcgggagaaaagttcggtcatcagggccaactccatgttcctgaagaaacag
ggggcttcagaaaccttcttgaacaggccaagattacgctcccccgaaaacagggaattc
ctccctttgaaggacttgcccaaagctggcttggaggcagaacatcactcctgtgagcgg
gaccggtttcaaagacctggctgcaaagaagcggccaagatctatggcactttggacacc
tcttcctcatcctcatcctcttcctctcggcagcatttagatcccagccaacaattgaag
cccccggaacaaaagtggaagccttttgaaatgggcaactttgccaccacccagatggct
gttctggctgcccaacacaaccatgccaaccgggtggaggaggaagtcaagaagacctac
ctggagcccagcaacctacagaggtcctcagtcgtgggagcccggagtgtgacagacggc
ctccaccctcctccgtcgcacggggaaggatctgccatgcaaagcctcatcaagtacagc
gggagctttgctaaagaggcatcctcacggcagggggctggtaagaaaaccccttttggg
ggtctgggcaacatgaaactggaccctggtcgacagccttcccccaaggtccagcagctg
ctgtcccaccaagctggcaagcagctgaagaaggaacctgaacgaccggaaagtgccaaa
tctttcggacgagagagcatcggatctcaaggagaggtggaagtgagacatctccccgtt
ggcatcgcggtggcggtggcccgtcagaaggacaacagcagtggcggaaagctggggctc
gtggaccgtgatcgatccctctccttgagtaacgtgaaaggacacggacggttggatgag
gactgtggggacgaccgtccacgccttcgagaaaaccacctcctagcaagccgtttggag
cgagaccaggagaaactgctcagagaaagcaaagaattggctgattttgctcggatccat
ccggctacttgtgctaccagtggcttaaactccaacctcatggtgactgggggaccaccc
ctgactggttcaggacggtggactggtgaccccacaccacacctggtgacccatccatgg
ttacccagaagcagcagttcgtccatgtggcttactggccacccctacgggcacccttct
ttgcaccaaggcatgacccctgcttttccttctggcatggggggagcactcccctctgca
taccaatttgccagagatcctcaatccggccagcttgtcatgatccccagtgaacacctg
acccacttcgcagaattgatggaccgtgcacctcctctctggcctgccatatattctcct
accaggagctccctccagcacgctcaccagctccagctcttatctcaccagcagctgatc
cgtcagcatgagctatacctcctgcaacaacaggctgcacatgcccagttggtggagagg
ctaaaagccagcgaacagcgggcagagatggaagagaagatcactaaacggaacctggac
aatgccaaatcaggtttgccaacgtctgcctcaagccttctgcaccggaagcctccagtt
ttgtctccaagcacttctgtgtcctacaataaggcgatcagccctcctccgctgtcgccc
aggtcctcttctgtgtcgttgctcaaagctgaggttatccaaaagttggaggaaccacca
agccagccgacctattcctaccccacaactcccatcactcatccatctagcccacctcct
gcttctccaccccctgcccctaaccttcctcctaaagaagaggaggaaactgagaacatg
gagaagaaagagctggagctggaaaaagagacctctgcttcatatcagacgttatttcca
gaaattccatccggctatccattccagtcccttccagactccttcagaagacactaccca
taccttctccagccaaccgctacatccgatgcagatgagttgggctccagtgtccctctg
cctaccagcagtcccgagcacttgacactttctccagaggtgaagcctattcatctttcc
ccatccaagattgtcaagcccatccaggctgtggaggaggaagaatccttggaagaacgg
gtgaaaacggagatggagatggacaatagccaggaagaaggcagctgtgaacaggatatg
gaggtcctgggtatggcaacttcggttgccctccctgttgaggacgccgatggttgtgat
cttcagttgcaccacggcaaaaccctcaggacttcagaccacgaggaagttcttgaggat
tgccaagctgcctacccagagatgtcctgctcggtggagatggacacccaagcagacgag
accaatgacagtgaaacctgccccattcatgactatggtggaagtttgttacagagagac
actgaacagtctgagataggactggtccctcagcctgagaagtcaccgttggctgtagaa
atgccccatatcagttctccctcaaacaaggaatttcccagcatgcttcaggaagagggg
gaacccacggtagaagcccccatctacaggaatgagatgtattcctgcccactcccacct
ctggatatcaaaatggatgacccattggctggtatgaacgccttagcagcagcagctgaa
ttaccccaagcgtgttccttgctcacaaacagtgatggtggtgtcactcaggaggcagtg
gtgaacttagaagtgtcttctagcctgtccccagagcacacctttctgcacggaattacc
ctcctgagcgaaattgcagaactggagttggagaaacggcagcaggaaaccgaaggtcca
gagaacttctcagctcatccagccttggaaagcctgttagctgctggtacccagatgctg
atggaagtcctctccacccccttcatggatagcctgaagaacatccgtctgcctcgggaa
ctggaccccaataagaaatacagctggatgcagaagaaagatgagccgatgtattccatt
aaatcgtccattgggagcatggatgccatggaactggattaccggatgaagttagctgag
ctgcagaggagatacaaggaaaagcagagggaattggcgaagctgcagcggcggagagac
tctgaggaaaagcatgacgagaaaaatagaagcttggcaaaacgaggtccaggaaggccc
agaaaacggaaccatggatcaagcgctctgttgccccctaaggagcgagggaagagtgac
ggaaggagtggaaagctgagcaaatccctgtcgctttccgaagactcagaaatgggtgat
gggagggaggagaagcaccgagggcttctcctggatgaggaagaggagggagagaccagg
agtgggaagacaaagaccaggcatcgcagttgggatgagcaagatctcttgatgaacttc
tccagcgagctcaagattaagaagaagaaggtggcctctgatcaggaacaactggtgagc
aagctcgacaaagccctgtcactcaccaggcgcagcaagctgaagtctccgttcaagttc
gtggataggtccagagggaggcagaaaaatggcggctattacaacaaccgatacttgtcc
ccccacggtgccttgtttggcaaggatgccaaaaacaacttggccaaaagcctcagcttc
tccttgaaagcctctaaagaaggtaaaaacaaaatggcggtcaaaatgaagaagttggag
gtggggctcaaaatgaaaggccaccatctgaaggtttccaactcaccagcgatatctgaa
gtgagcagttactcctacaatacagattctgaggaagaggaggaatccttgaaggatgag
tggtcttctcattccccaaccagtgccaggatgagaccctccagcctctatagtgtcatg
gcccccaaatgcagcaggatctctgacatcttcaaagccggcaagaagagcatcacctca
acaaggactctcaaatctaaaatggctgccaatagaaagcgggaattttgtttactgtcc
agggaggccaaagctggatcgtcatacagtgactcttcggaggactcgttcgatcaagat
tctagctcagaagaagaggacgaggaggaggaagaagacgatgatgacaataatgatgaa
gaagaagaaatggaaggctatggggcagcggtcaacgagaggctttcaccatctgctttg
gatgaaagtggcttggggctcctggccaggtttgcagctagcgccatcccaagccccatc
attgtgccttccgtgtccatcgtccaactggaagccaaacagaaagcaaagaagaaggaa
gagagacaaagcctgatggggaccgagtttgaatatacggactctgaaagcgatgtgaag
atccggaagaaatctccagcgggtttactccatgggaagaaagggtccctagagcaaggc
ccaactgcaggccccatggagacctcctcaggtaactcgttggacaagaccaagatggtg
actgagaagagccggaagctgaagaaattcagatcgcccaaagagctgagttttgagttt
gggctggaggtcaacgatgacgatgcctggaatcggcgacggagcgagaggatcttcctt
cacgacgctaccacctcagctggcttggcctcctccaccccggcgagctccattccggtt
tccaaaagtggacgctgcctgaaggggaccctgttgagccccaagaaggaagggaacagg
gggaaggagaggaaagagctgagcaagaagaagaaaaacaaggagggggctgtctgctct
tccgctggttcgtcctcttcttcttcctcgtcctctttgctttctcctctgggcatcgcc
agctccctgccggacctccatgccagcttggccagctctttgacctccagcaagaagaac
aagggcaaagctaagacaaaagaggccaagaaggagacccgagggaagggaggagccgtg
agcaaacttatggaaagcatggccgctgaggaggactttgagcccaaccaggacagcagc
ttctcggaggatgagaacatacccctgaatctccttctggaaaggcccttgactccagct
cctcgttcttgcatcattgacaaagacgaactgaaggatggcttgaaggtcctgatcccc
atggatgacaagttactctacgctgggcatgtcaagaccgttcattctcctgacatatac
cgggttgttgtggaaggcgagcgaggaaatcggcctcatatttactgcttggaacagttg
ctgcaggaagctatcattgatgtcaaacccccttccgtgcggttcctaccagaaggagca
cgaatagctgcctactggagtcagcagtaccggtgcctctacccggggacggttgtccga
ggggtccatgatcaggaggaagatggtgatttgatcacagtggaatttgatgatggggac
actgggcggattcctttatctcacatccggcttctcccccctgattacaagatccaatgt
gccgaaccctctcctgcccttctggtgcccagcatgagacgccgcagccgcaaatccagc
aaggacttgggcgaaggaaacggggtggaatcggaagaagccggagccaagggcaaaggg
cgcgggaggaagccgaacaagaagcagaaaacagaagaatctgttctggctgatcagacc
atcacgggagagatactggccaactcttctattggctcggaactgccaatttgcaaacca
gctgccaaaggctctcagaagatccagtcggttccttccaggactcctccagctccagca
gaagacaaacatcacagcaaaacaggcaaagggaagatttcttccaagctccatggctcc
gttcccaccaccttccagaccccggtgtttggcaatgttcgtgggaacgagccctaccct
ggaccgtttggtccttccagtagctcctcgggaaaagtcaaatcaaagaaaggaaaatcc
accgaggagggacaagaatttgggtctgcgcccaaagcccagaggaagatcccagacagt
gagatcctgatcaagctggaccacgagggggtcatgtctcccaagaccaagaagaccaaa
gaggccatgaggatgctgggggagtcaaacttggccagtaggagagacgctaagaacctc
ttaggacttgggtacagcgccatgggctgcccaaaccccaagcagaaatcttcccgaagc
aagactgttatggagggagagcctcctcctaattttggaagcacgtttgagaactctgca
gatcctccatcttctaaggctcaagaagatggtggtgaactggccccggcgagggatgag
tcagaaagtagtggtagcagctcagattctgaaggcgaagaagaaacggagaagaacgga
ggtggtgctcaagatagcagctcggccagctcaagggcctccaccccaatgtcctcctca
aactcctcctcctcttcttcctccagcagcagcagctcgtcctcctcctcttcctcctcc
tcctcctcctcctcttcttcctccgcctccagctccagctcttcttcctcatcctcctct
tcctcctcttcttccaccaccgacgaagactcctcctgcagctccgaagatgaggcagca
gagacccaacccagcgcctcttccacgcagcccaccagcccagccaagcccaccaaggcc
tcagggaagtctccgtcctcttcacattcccggaatccaaaacagcctcagcagcaggtg
gtgcagaaacagcaaccaagcgggaacaagaaccggtgcaagaaacgggaaggaatccac
ctgcccaccacgaaagagctagccaaacgccagaggctgccctcggtggagaaccggccc
aaaattgctgcctttctgcctgcgcgacaactttggaagtggttcgggaaccctacccag
agacgcgggatgaaggggaaagcccgcaagctcttctacaaggccatcgtccgcgggaag
gagatcatccgcatcggagattgtgctgtctttctgtcagcggggcggcccaacctcccg
tacattggccggatccagagcatgtgggaatcctggggaaacaacatggtggtccgagtg
aaatggttctatcatcctgaggaaaccaaccctgggaagaagctcaatgaaggcaagcga
tgggatcaaaaatctgtccggaccttatcagcagctcttcaagcttccagccagagaaag
gacttcatggagagggctttgtaccagtcctctcacgtggatgaaaacgacgttcagaca
atctcacacaaatgcctggtagttgatttggaacaatatgagcagatgctgaagacaaag
aagtatcaagacagtgaagatttatactacctagcagggacttacgagcccaccacgggc
atgatcttcaacactgatggcgtccccatcgtttgctag
DBGET
integrated database retrieval system
