Crotalus tigris (Tiger rattlesnake): 120317814
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Entry
120317814 CDS
T08476
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig02010
ABC transporters
ctig04145
Phagosome
ctig05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120317814 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120317814 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120317814 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctig02000
]
120317814 (TAP2)
Enzymes [BR:
ctig01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
120317814 (TAP2)
Transporters [BR:
ctig02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120317814 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_30
AAA_15
AAA_22
AAA_23
AAA_29
AAA_16
TsiV3
Motif
Other DBs
NCBI-GeneID:
120317814
NCBI-ProteinID:
XP_039220645
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MLVPVTFQAILLLFCDRILLSLLNGWSPSLVPLGVSAAWLEAALRLLVLLGVRGLLSMGR
TSPVSFSTVAAVSILPPLYLLVGHWLGDPPLLVSSAAWSWWLAIYGAVGFSQLLWGILAE
GRSPKESRKEDKATLWKMLHLFRPDKLYLTGAFLFLVLAVIGETFLPYYIGRLIDILGTK
YDAEAFSTAISLLFLISFASSVFASCRGGLFMFTISRMVIRTRNLLFSSLVRQDLAFFQE
VKTGALASRLSKDTTMMSRSVPLNTNVFLRSLIKSIGLYIFMIRLSWRLTLLMLIETPLM
MAVQKFYNVRHQALLKAIQDSVARSEEVVREVISSVQTVRSFATEEKESQRYEASLEDTC
RLRNQRDLERIVYLFTVRVLQLGLKLILLYCGYQQICNGLMTKGNLVSFILYQANVGLYV
QTLIYTYGDALSNVGAAEKVFEYIDRKPSVSTEGTLSPETLSGHISFQNVTFCYPSRPEI
QVLKNVSFELCPEKVTALVGPNGSGKSSCVALLEHFYEPQSGEVLLDGEPIGKYEHKYLH
KQVALVGQEPVLFSGSIWDNITYGLQGCTEEDVIRAAKEADALGFINELEGGFTAEVGEK
GGQLSIGQKQRLAIARALIRDPKVLILDEATSALDTKSEAAILESLQKNKARTVLVIAHR
MQTVENADKIVVLEDGVVSLCQPVDPAAESVKSEEKEEGFAEPSESKEGSDELQDSQSDE
ERGPSSRAPDETQLCGEDESDSEDSQLEVIRDACKAVN
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgctggtccctgtcacgtttcaggcaattctcctgcttttctgtgaccgaatcctgctc
tccttgctgaatggatggagcccctccctggtccccctgggggtctcagcggcttggctg
gaggccgctctccgactgctggttctcttaggggtcaggggtctgctctccatgggtcgg
acctcgccagtgtccttctccacggtggctgcagtcagcatcctgccccctttgtacctg
ttggtgggacactggcttggggaccctcccctcctggtctcttcggccgcgtggtcttgg
tggctggcaatctacggggcagtgggcttctcccagctcctctgggggatcctggcagaa
gggcgaagcccaaaggagtcccggaaagaagacaaggccaccctttggaagatgctccat
cttttccgtccagacaagctgtatctcactggcgctttcttgttcctcgtcctggcggtg
attggtgaaacattcctgccctattacatcgggcgtttgattgacatcctgggcaccaaa
tacgacgcagaagccttttccacagccatctctctactcttcctgatctcatttgcaagc
tccgtgtttgccagctgtcgtgggggactcttcatgttcacgatctcacggatggttatc
cggactcgcaacttactcttctcttctctggtgaggcaagacctggccttcttccaggag
gtgaaaacaggagcgctggcgtcccgcctttccaaagacacaactatgatgagccgctcg
gtgccactcaacaccaatgtcttcctgcgatccctgattaagtccattgggctctacata
ttcatgattcgcctgtcctggcgcctgacactgctaatgctgatcgagaccccactcatg
atggccgtccagaagttctataatgtccgtcatcaggcattactgaaggcgatccaggac
tcggtggcccgctcagaggaggtggtgcgcgaggtaatctcctccgtgcagacggtgcgc
agctttgccactgaggagaaggagtcgcagcgctacgaggcgtccttggaagacacctgc
cggctgaggaaccaaagggacttggaaaggatcgtttacttattcactgtacgggtcctc
cagttgggcctgaagctgatcctgctttactgtggctaccagcagatctgcaacggcctc
atgaccaaaggaaacctggtctccttcatcctctaccaggcaaatgtggggttgtacgtg
cagaccttgatttacacttatggggatgccctaagcaatgtgggcgcagcagaaaaagta
tttgaatatattgaccggaaaccttctgtcagcacagaagggacgctgtctccagaaacc
ctctctggacacatctccttccaaaacgttaccttctgctatccttcccgccccgagatc
caggtcctgaagaatgtctcctttgagctctgccctgagaaagtgacggcgctggtgggc
ccgaacggcagcggaaagagcagctgcgtcgccctcctggagcacttctacgaaccccag
tctggggaggtcctgctggatggagaaccaattgggaaatatgagcacaagtatctccat
aagcaggtggccctggtgggccaggagcccgtcctattctccgggtccatctgggacaat
atcacctatggcctgcaaggctgcactgaagaagatgtgatcagagcagcgaaagaagct
gatgccctgggattcatcaatgaactggaaggaggcttcactgcagaggtgggggagaag
ggagggcagctctccatcgggcagaagcaacgattggccattgcccgggccctgatccgt
gacccgaaggtcttgatactggatgaagccacgagtgccctcgacaccaagagtgaagct
gcaatcctggagtctctgcagaaaaataaagctcggaccgtgctggtgattgctcaccgg
atgcagacggtggaaaacgcagacaagattgtggtgctggaagacggtgttgtgagtctg
tgccagccagtggacccagcagctgagtccgtgaaatcagaggagaaggaggaggggttt
gcagagccatcagagtcgaaggaaggctctgatgagttacaggactcacaatcggatgaa
gagcgtggcccctccagtcgtgctccggatgagactcagctgtgtggggaggatgagtca
gactctgaggactcacagctggaagtcattagagatgcttgtaaggcagttaactag
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integrated database retrieval system
