Crotalus tigris (Tiger rattlesnake): 120319232
Help
Entry
120319232 CDS
T08476
Symbol
TRIM62
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120319232 (TRIM62)
Enzymes [BR:
ctig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120319232 (TRIM62)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120319232 (TRIM62)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_6
zf-RING_5
zf-C3HC4_3
AAA_13
zf-RING_10
zf-Nse
Phasin
DUF4795
SHE3
CorA
DUF5955
KxDL
V_ATPase_I
Prominin
GlgE_dom_N_S
Motif
Other DBs
NCBI-GeneID:
120319232
NCBI-ProteinID:
XP_039223802
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MAAEQRLSAQASLFYRVTEPTIDDGAASGPGTGSPERLPRRRRGDRFRWVGRGPFCGRGL
HCAGAWRARRAEGEAAMAVPAPGCSLKDELLCPICLGLYQEPVSFGCEHYFCRRCISEHW
SRQEAQAAPARDCPECRRAFSAPALAPSLKLANIVERFAAFPPEAALGGGGGGGRGGRAG
GSPCGKAHAKVRLFCLTDRAVVCFFCDRPALHEQHQVTGLDEAFEEMQRELKEQLQTLQD
SERGHTEALALLKHQLAETKSSAKSLRATIGEAFERLHRLLRERQKAMLEELEADTARTL
TDIEQKIQRYSQQLRKVQEGSQILQERLAETDKHSFLAGIASLSERLKGKIHETNLTYED
FPTSKYMGPLQYTIWKSLFQDIQPVPAMLTLDPATAHQRLILSDDCTIVSYGNLHPQPLQ
DSPKRFDVEVSVLGSEAFNSGIHYWEVVVSEKTQWMIGLAHEAVTRKGNIQIQPSRGFYC
IVMHDGNQYSACTEPWTRLNVKSKLEKVGVFLDYAKGLLIFYNADDMAWLYTFREKFPGK
LCSYFSPGQSHANGKNVQPLRINTIRI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagcagcgcctcagcgcgcaggcgtcactcttctaccgcgtcacagagcct
accatcgacgacggcgctgcttccggtccgggcaccggaagtcctgaacgcctcccgaga
aggcggagaggagatcggttccgttgggtcgggcggggtccgttttgtgggcggggcctc
cactgcgcaggcgcctggcgagctcggcgggctgagggagaagccgccatggcggtgccg
gcgccgggctgcagcctgaaggacgagctgctgtgcccgatctgcctgggcctctaccag
gagccagtcagcttcggctgcgagcactacttctgccgccgctgcatctccgagcactgg
agccggcaggaggcgcaggcggcgcccgcccgggactgccccgagtgccgccgggccttc
tcggcgcccgccctggcgcccagcctcaagctggccaacatcgtggagcgcttcgccgcc
ttcccgcccgaggcggcgctgggcggcggcggcggcggagggaggggcggccgggccggg
ggctcgccctgcgggaaggcccacgccaaggtgcgcctcttctgcctgaccgaccgcgcc
gtcgtctgcttcttctgcgaccggcccgccctgcacgagcagcaccaggtcaccggcctg
gacgaggccttcgaggagatgcagagggaactgaaggagcagctgcagaccctccaggac
agcgagcgtggccacacggaggccttggctctgctgaagcaccagctggccgagaccaag
tcctcggccaagagcctgcgggccacaatcggcgaggcctttgagcggctgcacaggctg
ctccgcgagcgccagaaggccatgctggaggagctggaggccgacacggcccggacgctg
accgacatcgagcagaagatccagcgctacagccagcagctgcgcaaagtgcaagagggc
agccagatcctgcaggaaagactggcggaaactgacaagcacagcttcctggcgggcatc
gcctctctctcggagaggctgaaggggaagatccacgagactaacctcacctacgaagac
ttccccacttcgaagtacatggggcctctgcagtacaccatttggaaatccctcttccag
gacatccagccagtgcctgccatgctgaccctggacccggccaccgctcaccagcgcctg
atcctctctgacgactgcaccattgtctcctacggcaacttgcacccgcagccgctgcag
gactcgcccaagcgcttcgacgtggaggtgtcagtgctgggctcggaggccttcaacagc
ggcatccactactgggaggtggtggtctcggagaagacccagtggatgatcgggctggcc
cacgaggccgtcacccgcaagggcaacatccagatccagccgagccgcggcttctactgc
atcgtcatgcacgacgggaaccagtacagcgcctgcacggagccctggacgcggctgaac
gtcaagagcaagctggagaaggtcggggtcttcctggactacgccaaggggctgctcatt
ttctacaacgcggatgatatggcgtggctttacaccttccgggagaagttccccgggaaa
ctgtgctcctacttcagccccggacagagccacgccaacgggaagaacgtgcagccgctc
cggatcaacaccatccggatctaa
DBGET
integrated database retrieval system
