Candida tropicalis: CTRG_00586
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Entry
CTRG_00586 CDS
T01115
Name
(RefSeq) TFIIH basal transcription factor complex subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ctp
Candida tropicalis
Pathway
ctp03022
Basal transcription factors
ctp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTRG_00586
09124 Replication and repair
03420 Nucleotide excision repair
CTRG_00586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_00586
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_00586
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTRG_00586
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTRG_00586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
AAA_lid_7
Motif
Other DBs
NCBI-GeneID:
8296158
NCBI-ProteinID:
XP_002545805
UniProt:
C5M3E7
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MSAHLFKATVNEYLEGLPKTVQSKLYEAPATCLSIFRLLSPMAKFYIMSMIFNEKPIALR
DLDKWCKPSARKLEFEALKRLESLHLIEYDSKGSHIRLHSTFRKNFRDCLTGSQNPNAFG
SISTTADKYKVDIAFLDNFASSKWETILHFMVGTEATATPSDSVLSLLKLGGLMEGPNNK
LRITNSGFQFLLQDVNAQIWTLLLQYLNLTQELNMDPVDVLNFIFVLGSLELGKSYAVST
LSETQVSMLADLKDYGLVYQRSDTSGRFYPTRLATTLTSDSAALKTPAMAMDEEEQQVVT
KESIIIETNFKLYAYTKSPLEIAILNLFVQLKTRFANMVCGQITRESIRNALYNGITADQ
IIKFLETHAHSQMRILAKEKLDKKIEFDTSHNINTAGGAPQSKTDGSISQHKLEILPPNV
VDQIKLWQLELDRIQTFDGYLFKDFANQQEYDILSNYASELGVLIWADKVKRKFFVTKDG
MTQVADFANRKLKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacatttgttcaaagccacagttaatgagtacctagagggtcttcccaagaca
gtgcaatctaaattgtatgaggcacctgcaacctgtttatctattttcagattactttcg
cccatggccaaattctatattatgtccatgatctttaatgaaaaaccaattgcattacgt
gatctcgacaaatggtgcaaaccactggcgagaaaactagaatttgaagcgttgaaaaga
ttagaatcattacatttgatagaatatgatagtaaaggttctcatattcgattgcattca
acatttcgaaagaatttccgtgattgtttaacgggttcacagaatcctaatgcttttgga
agtattagcactacagctgataaatataaagttgatattgcattcttggataattttgca
tcactgaaatgggaaaccattttacatttcatggttggtactgaagccacagctactcct
tctgattcagtgttgagtttacttaaattgggtggattaatggagggtcctaataataaa
cttagaattacaaatagtgggtttcagtttttattacaagatgtgaatgcacaaatatgg
acattgttgttacaatatttaaatttaactcaggagttaaacatggatccagttgatgtt
ttgaattttatttttgttttgggatctttagaattaggtaagagttatgcagtatccact
ttaagtgaaacccaagttagtatgttggcagatttgaaagattatgggttggtatatcaa
cgatctgatacatctggaagattctatccaactagattggcaactactttaacatcggat
tcagctgccttgaaaactcctgcaatggctatggatgaagaggaacaacaagttgtaacc
aaagaatccatcattatagaaacaaatttcaaactatatgcatatacaaaatcaccattg
gaaattgcaattttgaatttatttgttcaattaaaaaccagatttgccaatatggtctgt
ggacaaattacaagagaatcaattcgaaatgcattatataatggtataactgcagatcaa
atcatcaaatttttggagactcatgctcatagtcaaatgagaattttggctaaagaaaaa
ttggataagaaaattgaattcgataccagtcataatatcaatactgccggtggtgctcca
caaagtaaaactgatggatctatttctcaacacaagttagaaattctacctccaaacgtg
gttgatcagattaaattatggcaattagaacttgatagaattcaaacatttgatggttat
ttatttaaagattttgccaatcaacaagaatatgatatattgtccaattatgcatctgaa
ttgggtgtattgatatgggcagataaagtaaaaagaaaattctttgtgacaaaagatggt
atgactcaagtggctgattttgccaacaggaaattaaaaagatag
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