Candida tropicalis: CTRG_01241
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Entry
CTRG_01241 CDS
T01115
Name
(RefSeq) suppressor of stem-loop protein 1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ctp
Candida tropicalis
Pathway
ctp03022
Basal transcription factors
ctp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTRG_01241
09124 Replication and repair
03420 Nucleotide excision repair
CTRG_01241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_01241
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_01241
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTRG_01241
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTRG_01241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Anillin_N
TackOD1
DZR
Motif
Other DBs
NCBI-GeneID:
8297513
NCBI-ProteinID:
XP_002546935
UniProt:
C5M5W0
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MDDSDEEYVRTNSPSSKLSSEVPEAKASPRDKNGVSTRTRSSRRGEVSDLKGANGYAWED
EYQRSWDIVKDDESGSNSFEAMVQSIIENRKKKIMKNPSTPFQRGIIRTLVIIIDGSSVM
SEKDLRPNRLSMTLSYLQDFVTEFFDQNPISRLGIILMRNGIANLVSEVSGSPQYHIDKI
RQLKARQHNRFEPKGDPSLQNSLEMARSLLKFNFGSTSNNTKNSKEVLIIFGALFTSDPG
DIHRTIDNLIKDEIKVSVIGLSAQVAICQELVNRTNKEPRNSQSKHYGVIMNESHFKELL
MDSVTPLPLTESEKRLQDAQSEDGGVPVLRMGFPSKVQPTLTSVVTGTDMIIEFPHLNAS
FPTQGSEDSKDAVEIQNNRAVAAASSSVIGYQCPQCKSKVCNLPTLCPVCGLMLILSTHL
ARSYHHLVPLAQFKEVPVAPVYDSEFCFGCQLKFPDGVKAGTQKGSLESMTSSRYRCKRC
EKSFCINCDVFVHEVLHTCPGCENM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcagatgaagaatacgtaagaacaaattcaccatcttcgaaactttcatca
gaagttccagaagcgaaagcatcaccacgagacaagaatggcgtttctacacgtactaga
tcatcacgaagaggagaagttagtgatttaaaaggggcaaatggttatgcatgggaagat
gaatatcaaagatcatgggatattgtgaaagatgatgaactgggaagtaattcgtttgaa
gctatggttcaatccatcattgagaatcgaaagaagaaaattatgaagaatcctagtact
ccattccaaagaggtatcattagaactttggtaattataatagatggatcactggtcatg
agtgaaaaagatttacgacctaatagattatcaatgacattgtcatatttacaagatttt
gttaccgagttttttgatcagaatccaatatctagattaggtataattttgatgagaaat
ggtattgccaacttggtgagtgaagttagtgggctgccacagtatcatatagataaaatc
agacaattaaaagcaagacagcataatagattcgaacctaaaggggatccatcactacag
aattcattggagatggcaagatcgttgctaaaatttaattttggttctacttccaacaac
acgaagaactccaaagaggtgttgattatatttggtgcattattcacaagtgatccgggc
gatatacacagaacgatagacaatttaatcaaggatgaaatcaaagtcagtgttattggt
ttgtcagctcaggttgctatttgtcaagagcttgttaatagaactaataaagagccgcga
aactcccagtcaaagcattatggtgttattatgaatgagtcacatttcaaagaattgtta
atggattcagtgacccctttaccattgacagaatcagaaaagcgcttacaggatgcacaa
tcagaagatgggggtgttccagttctacgtatgggatttccatcgaaagttcaacctact
ttaacttcagttgttacaggaacggatatgatcattgaattcccacatttaaatgcatct
ttcccaacccaaggatctgaagattcaaaagatgctgttgagattcaaaacaatcgagcc
gttgctgctgcttcatcttcagtaataggttatcaatgtccacagtgtaagagtaaagtt
tgtaatttaccaacactttgtcctgtgtgtggattaatgttgattttgtctactcatttg
gcaagatcatatcatcatttggttccacttgcacaatttaaggaggtgcctgttgctcca
gtttatgatagtgagttttgctttggatgtcaattgaagtttcctgatggggttaaagct
ggcacacagaagggttcattagaatcaatgacaagttctcgttatcgttgtaaaagatgt
gaaaagtcattctgtataaattgtgacgtgtttgtccatgaagttttgcacacctgccca
ggatgtgaaaacatgtaa
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