Candida tropicalis: CTRG_01324
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Entry
CTRG_01324 CDS
T01115
Name
(RefSeq) ATP-dependent DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ctp
Candida tropicalis
Pathway
ctp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CTRG_01324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_01324
Enzymes [BR:
ctp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CTRG_01324
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CTRG_01324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
8301051
NCBI-ProteinID:
XP_002547018
UniProt:
C5M643
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MAYYPYDGEMKYFLDDIKPPPPNNIEPTFTLLTNELFDKLDAVRRENLNEFRTITEKKSF
IIKKFIDVFRTHIGQDIYPSVKLIFPEKVGRLYFIKEIALARLLIRMYKIPKDSDDYKLL
HNWNQQYQRSKRFVVDEKKIRDLPLQASRIIGKRRPYVEKPKEFTVQQINSILDQLTMAK
MSQDQMEILKPVLDELGISEVRWLIHIVLKKTILSNMERVFFNDWHPDGYRVFTICNDLQ
KAFQFSTNPEERLDSSQLNIHPLFKFKPQLAEKLTSSYNNLVKKLQNKHEMDPPYEAKFK
EMDLQDKFYIEEKMDGDRMLLHKDGDSFKFFSRKLKDYSFLYGESFQLGSLTKYLRHAFA
GNVKSVILDGEMVAYDYERNAILPFGTLKSSAIQESVRQFTTIDQYQQQTSYPYYLVFDI
LYLNGKDLTNYPLFFRKNILNRIIRPVPHRFEVHDARLGSSPQDIERAIREVVSSRSEGL
VLKNVQSKYAIDGFRNPDWIKVKPEYLEKFGENLDLVVIGKIPAIKNSYMCGLKSSVDGV
YYSFCVCANGIEIDEFDKIERITHGKWIKTDDEMPPESLIKFGTKLPTYWIHPKDSLVLE
IRARSIDARKEKTYAVGTTLHCNHCRKIRDDKPIDECITLENYLEMKANYSNDLSHAQNA
LGKKRGLSDSFNEGPSLKKTKVEFDLFEGFEFLIMSDKKEANGDSTSIDELKIMVKKYGG
KVVNSIDVRTNMQIIVITEKDLPVCNKYLLRGLDLIKPCWIMECIARRKILQLEPYFIYA
TGNWEKFQHMADRYGDSYIIHQPLNIVVPNLSNEELKRLRNSYDWGDSKPLVYLFEDLSF
HILGNSVAAESLKDRIERFNGEVIDNYIKCYYIVIPQSTPRENALKEIDIMAKQIAEALT
IDESGKTSRIPYFVTESFVTKSIELNCVVDPEDYKYV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactatccatatgatggagagatgaagtactttctagatgatatcaaaccgcct
cctccaaacaacatcgaacctactttcactctattaactaatgaattgttcgataaattg
gatgctgtacgacgcgagaatcttaatgaatttagaacaatcactgagaagaaatcattt
attatcaaaaaattcattgatgttttcagaactcatattgggcaagatatatatccttca
gtgaaattaatatttcctgagaaagtaggaagattgtatttcattaaagaaattgcatta
gctaggcttttgatcagaatgtacaagattcctaaagattcagatgattataaattactc
cacaattggaatcaacaatatcaaagatcaaaaagattcgtggttgatgaaaagaaaatc
cgtgatttgccattacaagcatcgaggattattggtaagagaagaccttatgtagaaaaa
cctaaggagtttactgtacagcaaatcaactccatattggatcaattaacaatggcaaaa
atgtcacaggatcagatggagatattgaaacctgttttagatgaattgggtatatcagaa
gtcagatggttgattcatatcgtgttaaagaaaacaatactactgaatatggagagggtt
ttctttaatgattggcatccggatgggtatagagtattcactatttgtaatgacttacaa
aaagcatttcaattctcaactaatcctgaagaaagattagattccagtcaattgaatatt
catccattattcaagttcaaacctcaattagctgaaaaactaacttctagttataataat
ttagttaagaaattgcaaaacaaacatgaaatggatcctccatatgaagcgaaatttaaa
gagatggatttacaagataagttctacattgaagagaaaatggatggtgatcgaatgtta
cttcataaagatggtgattcattcaaatttttctcaagaaaattaaaagattattcattc
ttgtacggtgagagttttcaacttggttcgttgactaaatatttacgacatgcatttgct
ggaaatgtcaaatcagtgatattagatggggaaatggtggcttatgattatgaacgaaat
gccattcttccatttggaacacttaaaagtctggcaatacaagaaagtgttagacaattc
actactattgatcaatatcaacaacagacgtcatatccttattaccttgtatttgatata
ctttatctaaatgggaaagatttaacaaattatccattgtttttccgtaagaacatcttg
aatagaataattcgtccagtccctcatagatttgaagttcacgatgcaagattaggttct
tcaccacaagatatagagcgagctatcagagaagttgtcagtagcagaagtgaagggttg
gttttgaaaaacgtacaactgaaatatgccattgatggatttcgaaaccctgactggatt
aaagtcaaaccagaatatttggaaaaatttggagagaatttagatcttgttgttattggt
aaaattcctgctattaaaaactcatatatgtgtggattaaaaagttcagttgatggtgta
tattatagtttttgtgtttgtgccaatggaattgaaattgatgaatttgataaaattgaa
agaataactcatgggaaatggatcaaaacagatgatgaaatgcctccagaactgttgatt
aaatttggcaccaaattgccgacttattggatccatcctaaggattcattggtgttagag
atccgtgcccgttcaattgatgcccgtaaagagaaaacatatgccgtgggaactacatta
cactgcaatcattgtcgtaaaataagagacgataaaccaattgacgaatgtattacattg
gagaactacttggaaatgaaagctaactacctgaatgatttatctcatgcacaaaatgca
ttgggaaagaaacgtggattatcagactcgttcaacgaaggtccttctttgaagaaaaca
aaagtcgagtttgatttatttgaagggtttgaatttttaataatgagtgataagaaggaa
gctaacggagattcaactagtattgatgagttgaaaatcatggttaagaaatatggaggc
aaggttgtcaattcaattgatgttagaactaatatgcaaatcatagtcattactgaaaag
gatttaccagtgtgtaacaagtatttactcagaggtcttgacttgatcaaaccatgctgg
atcatggaatgtattgcacggaggaagattcttcaattggagccgtattttatttatgca
actggaaattgggagaaatttcaacatatggcagatcgatatggggattcatacatcatc
caccaaccattaaacatagtggttcctaatttatcaaatgaagaactcaagagacttcgt
aatagttatgattggggggattctaaaccattggtatatttattcgaagatctttcattt
cacatattgggaaattcagtagctgcagaatcattaaaggatagaattgaaagatttaat
ggagaggtgattgataactatataaaatgctattatattgttattccccaatcaacacca
agagaaaatgctcttaaagagattgatataatggcaaagcaaattgctgaagctttgacc
attgatgaaagtggtaaaacctcacgtattccatatttcgttactgagtcattcgttacc
aagtcaattgaattgaattgtgtcgttgatccagaagattacaagtatgtatag
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