Candida tropicalis: CTRG_02676
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Entry
CTRG_02676 CDS
T01115
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ctp
Candida tropicalis
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_02676
Enzymes [BR:
ctp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTRG_02676
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
Pre-60S particles
Helicases
CTRG_02676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Pyocin_S
Motif
Other DBs
NCBI-GeneID:
8302063
NCBI-ProteinID:
XP_002548379
UniProt:
C5M8F4
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MKTNTESLAWENLRYDLYPWIKEAISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGK
TLSYVIPVLQKISTRLYKKDDDGDLPEKVKRGHMLSIVLAPTRELANQIQSVFDNVLQYL
PSDYKSINTQLLVGSMGTVREDIDNFLKNQPQILIGTPGRILDFLGSQYVKTNSLEIAIL
DEADKLLDCSFETDVVNILRKLPKQRRTGLFSATLSSAGDTIFRTGMNNPVKVQVKSKNS
LGEQVNAPKSLQLSYIMIQPEFKITTLLDMLSKYQYKKAIVYFPTCTSVKHFYQIFSKIP
FNKNDNDEEEDLKFFSLHGQLNTKARLRTLEKFTEGDANTNKCVLMATDVAARGIDIPDV
DLVIQIDPPTDPDVFLHRCGRTGRANKVGRAILMLNEDSQEEDYIGFMQVKGINLNEMKR
SNIDQKDHDLFQKKLREYMLEDRARHELGVKSYVGFIRYYSKHIASSIFRMASLDYLAVA
KMYGLLRLPKMPETRYINKDAMPENGWLGDVIDMDKYSYADKQQEKSRLDNLEQDKLKKI
EDAKRRKELKSKE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaatacagaatctcttgcatgggagaatttaagatatgatttatatccatgg
ataaaagaagctatatcatctatgggctatcctacgatgacaccagtacaagcttcaact
attcctttattaagtgggaacaaagatgttgtggtagaagcagttactggatctggtaaa
actttatcttatgtaattcctgtgttacagaaaatatctactagattatataaaaaagat
gatgatggtgatttaccagaaaaagttaaacgtggacatatgttatctattgttcttgca
ccaactagagaattagcaaatcaaattcaatcagtttttgataatgtattacaatatctt
ccaagtgattataaaagtataaatacacaattattagtggggtcaatgggaacagttaga
gaagatattgataattttttgaaaaatcaaccacaaattttaattggtacaccaggaaga
atattagattttttgggttctcaatatgtgaaaacaaattcattggaaatagctatttta
gatgaagctgataaattacttgattgttcatttgaaacagatgtggttaatattttaaga
aaattacctaaacaaagaagaacaggtttattttcagcaactttatcttctgctggtgat
acaatttttagaacaggtatgaataatcctgttaaagttcaagtgaaatcaaaaaatagt
cttggtgaacaagttaatgctccaaaaagtttacaattatcttatattatgattcaacca
gaatttaaaatcacaacacttttggacatgttatccaaatatcaatacaaaaaggcaata
gtttatttcccaacttgtacttccgtgaaacatttttatcaaatattttccaaaattcca
tttaataaaaacgataatgatgaagaagaggatttgaaatttttttctttacatggtcaa
ttaaataccaaggctagattaagaacattagagaagtttacagaaggtgatgcaaatact
aataaatgtgttttaatggcgactgatgttgcagccagaggtattgatataccggatgtt
gatttagtcatacaaatcgaccctccaactgatcctgatgtattcttgcatagatgtggt
cgtacaggtagagcgaataaagttggtcgtgctatacttatgttaaatgaagattcacaa
gaagaagattatattggatttatgcaagttaaaggaatcaatttaaacgaaatgaaaagg
tcaaatattgatcaaaaagaccatgatttatttcaaaagaaacttcgagaatatatgctt
gaagatagagctcgtcatgaattgggcgtgaaatcttatgttggattcattagatattat
tcaaaacatattgctagttcgatatttcgtatggcatcattggattatttggccgttgct
aaaatgtatggattgttgagattaccgaaaatgccagaaacaagatatataaataaagat
gccatgcctgaaaatggatggttgggtgatgttatagatatggataaatacagctatgct
gataaacaacaagagaaatcaagattagataatcttgaacaagacaagttgaaaaaaatt
gaggatgctaaaagaagaaaagaattaaaaagtaaagaatga
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