Candida tropicalis: CTRG_04791
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Entry
CTRG_04791 CDS
T01115
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
ctp
Candida tropicalis
Pathway
ctp03015
mRNA surveillance pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CTRG_04791
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_04791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_04791
03041 Spliceosome [BR:
ctp03041
]
CTRG_04791
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CTRG_04791
mRNA cycle factors
Stress granule specific factors
CTRG_04791
Spliceosome [BR:
ctp03041
]
Complex C
Other components
Complex C specific factors
CTRG_04791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
YflT
RRM_occluded
FAM192A_Fyv6_N
Motif
Other DBs
NCBI-GeneID:
8296500
NCBI-ProteinID:
XP_002550493
UniProt:
C5MFE8
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MSAAETNQIQESLEKLNISEEQQQQPVAATTEQSAEEQGDSSGVAENSASLYVGELNPSV
NEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKFEDGEKAIEELNYTPIEGRPC
RIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDELGQSKCFG
FVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLA
YTEEEFEKLFAPYGKITSIYLEKDQDGKSKGFGFVNFEEHDAAVKAVEELNDKEINGQKI
YVGRAQKKRERMEELKKQYEAIRLEKLAKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTIT
SAKVMVDDAGKSKGFGFVCFTTPEEATKAITEMNQRMVNNKPLYVALAQRKDVRRSQLEQ
QIQARNQMRMQNAAAAGGLPGQFMPPMFYGQQGFFPPNGRGNAPFPGPNPQMMMRGRGQP
FPEQWPRPGPNGQPVPVYGIPPQFQQDFNGQNVRPPQQQQQQQPRGGYYPNRNQTNKRDL
AAIIASVPQDQQKRILGEELYPRIVATGKAQEPEAAGKITGMMLGLENQEILDLLDDDEL
FNNHFEDALTAFEEYKKSEGANAGAAPSEEQQA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctgaaactaatcaaattcaagaatctttggaaaaattgaacatttccgaa
gaacaacaacaacaaccagttgctgctaccactgaacaatcagctgaagaacaaggtgat
tcttctggtgttgctgaaaactccgcttctttgtacgttggtgaattgaacccatctgtt
aacgaagctactttgtttgaaatcttttctccaattggtcaagtttcatccattagagtt
tgtcgtgatgctgtttctaagaaatctttaggttacgcttacgtcaactaccacaaattc
gaagatggtgaaaaagccattgaagaattgaactacaccccaatcgaaggtagaccttgt
cgtattatgtggtctcaaagagacccatctgctagaagatctggtgatggtaacattttc
atcaagaacttgcacccagctattgacaacaaagctttgcacgatactttctccgctttc
ggtaagattttgtcttgtaaagttgctactgatgaattgggtcaatccaaatgtttcggt
tttgtccattatgaaaccgctgaagctgctgaagccgctatcgaaaacgtcaacggtatg
ttgttgaatgaccgtgaagttttcgttggtaaacacatctccaagaaggaccgtgaatcc
aaatttgaagaaatgaaagccaacttcaccaacatctacgtcaagaacattgacttggcc
tacaccgaagaagaatttgaaaaattgtttgctccatacggtaagattacttctatctac
ttggaaaaagaccaagatggtaaatctaaaggtttcggtttcgtcaactttgaagaacac
gatgctgctgttaaagccgttgaagaattgaacgacaaagaaatcaacggtcaaaagatt
tacgttggtagagcccaaaagaagagagaaagaatggaagaattgaagaaacaatacgaa
gccatcagattggaaaaattggccaaataccaaggtgttaacttgtttgtcaagaacttg
gatgactctattgattctgaaaaattagaagaagaattcaaaccattcggtactattact
tctgctaaagttatggttgatgacgctggtaaatccaagggtttcggtttcgtttgtttc
accactccagaagaagccaccaaggccatcactgaaatgaaccaaagaatggttaacaac
aaaccattgtatgttgctttggctcaacgtaaggatgttagacgttctcaattggaacaa
caaatccaagccagaaaccaaatgagaatgcaaaacgctgctgctgccggtggtttgcca
ggtcaatttatgccaccaatgttctacggtcaacaaggtttcttcccaccaaacggtaga
ggtaatgccccattcccaggtccaaacccacaaatgatgatgagaggtagaggccaacca
ttcccagaacaatggccaagaccaggtccaaacggccaaccagttccagtctacggtatt
ccaccacaattccaacaagatttcaacggtcaaaatgttagaccaccacaacaacaacag
caacaacaaccaagaggtggttactacccaaaccgtaaccaaaccaacaagagagacttg
gctgccattattgctagtgttcctcaagaccaacaaaagagaatcttgggtgaagaattg
tacccaagaattgttgctaccggtaaggctcaagaaccagaagctgctggtaaaatcact
ggtatgatgttgggattggaaaaccaagaaatcttggatttattggatgatgatgaattg
ttcaacaaccactttgaagatgccttgactgcttttgaagaatacaagaaatctgaaggt
gctaatgctggtgctgctccttccgaagaacaacaagcttaa
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