Chloroherpeton thalassium: Ctha_1196
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Entry
Ctha_1196 CDS
T00726
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
cts
Chloroherpeton thalassium
Brite
KEGG Orthology (KO) [BR:
cts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cts03021
]
Ctha_1196
Transcription machinery [BR:
cts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ctha_1196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
CDC45
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACF13660
UniProt:
B3QYW7
LinkDB
All DBs
Position
complement(1404013..1404966)
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AA seq
317 aa
AA seq
DB search
MPKKKSLSQGSEEDPNSLAKSVSDASSGKENPNLDKDSTKGQAFGEKQQDESSELSEEDE
VDFDDDDETSTEDDTPYTPDNDEDDEDENDDAGEENAEGNDGDDAKEQSERKHSRGTAEK
SRSRLEDYALIDQICDGDPHKRDQAYKRLLNKYRGQIFNLILKIIHNQNEVEDLVQETFS
KAFNSIENFNKEYAFSTWLYRIATNSSIDYLRKRRLKTYSLDNPITTKDDEYTIEIPDSS
EEPGKNIMQSQRDALVRSAIKNLPPKYRKVIEMRHLQERTYEEIAADLDIPLGTVKAHIF
RAREMLYKMLRDKLRNY
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaagaaatctttatctcaaggttcagaagaagacccaaattcactggctaag
tctgtttcggatgcttcttcaggcaaggaaaatccgaatttagataaggacagcacgaag
gggcaagcgtttggagaaaaacagcaagatgagtcttctgagttgtcagaagaagatgag
gttgatttcgatgacgatgatgagacttccactgaagatgacacaccgtatacaccggat
aacgatgaagacgatgaagatgagaatgatgatgcgggcgaagagaatgctgagggtaac
gatggcgatgacgctaaggaacaatccgaacgcaaacactcaagaggcactgcagaaaaa
agtcgctctcgccttgaagactatgcgctgatcgatcaaatctgtgacggcgacccacac
aagcgcgaccaagcctacaagcgcctgctgaataaatatcgcggccaaatttttaacctc
attttgaaaatcatccacaaccaaaatgaagttgaagacctggttcaagaaactttctca
aaggcattcaattcaatagaaaatttcaacaaagaatacgccttttctacttggctatat
cgcatcgccaccaatagcagcatcgattacctccgaaaacgacggctaaaaacctactcg
ctggacaatccgattaccacaaaggacgacgaatacaccattgaaatccctgactcttca
gaagagcctggaaaaaatatcatgcaaagccaacgcgatgcactggttcgttcagccatc
aagaatttgccgccgaagtatcggaaagtaattgaaatgcgccatcttcaagagcgcacc
tacgaggaaattgctgcggacttggatattccattgggcacggtgaaagctcatatcttt
cgcgctcgcgaaatgctctacaaaatgcttcgcgataaactgagaaattactaa
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