Cyprinodon tularosa (White Sands pupfish): 119771352
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Entry
119771352 CDS
T07496
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119771352
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119771352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
C5HCH
zf-RING_6
zf-RING_10
zf-RING_11
U-box
Senescence
Motif
Other DBs
NCBI-GeneID:
119771352
NCBI-ProteinID:
XP_038123148
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MEPRGDLLDQGNLSCSICLDLLKEPVTIPCGHSYCMNCIKVSWRQEDQRRIHSCPQCRKT
WRQRPVLKKNITLSALVESLRNSAPADHCYAGPEDVACDVCTGRKRKAVKSCLFCPASYC
EDHLQPHYDAPPLKKHKLVTPSKTLQENICSRHDEVMKIFCRTDQQCICYLCSMDEHKGH
ETVPAAAERTEKQKELQERRQQIQQRIQDQEKDVKLLQQEVEAINASADKAVEDSEKILG
SVIRLIQKRSSDVKQQIRSQQETEVSRVKELQKKLEQEITELKRKDAELEKLSITEDHTQ
FLQNYPSLSALSESTHSSSIHLWPIKDASEGPQEMLRDTWKKISLKVTGLGILLSELWTR
AEFLGYSKDITLDPNTANRYILLSKKNRKVTLMEQLQFYPDHPDRFARWWQVLSRNRLTG
RCYWEVEWIGEAVYVAVAYKNISRKGTSQDCVFGFNNKSWALQCEEGSYTFWHNSVKTPV
SGPVSSRIGVYLDHRAGILSFYSVSGTMTLLHRVQTTFTQPLYAGVWLSDDGDSAEFVKL
KQLG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagccgagaggagatctgctggaccaaggtaacctctcttgttccatctgtttggat
ctactgaaggaacctgtgactattccctgtggacacagctactgtatgaactgtatcaaa
gtctcttggagacaagaagatcagaggaggatccacagctgcccacagtgcaggaaaact
tggaggcaaaggcctgttctgaaaaaaaatatcacattatcggctttagtggagagtcta
aggaactctgctccagctgatcactgctatgctggacctgaagatgtggcctgtgacgtc
tgcactgggaggaaaaggaaagctgtgaagtcctgtttattctgtcctgcttcctactgt
gaggatcatctccaacctcattatgatgctccgccattaaagaagcacaagctggttact
ccctctaaaactcttcaggagaacatctgctctcgtcatgatgaggtgatgaagatcttc
tgtcgtactgatcagcagtgtatctgttatctctgctcaatggatgaacataaaggccat
gaaacagtcccagctgcagcagaaaggactgagaagcagaaggagctccaggagagacga
caacaaatccagcagagaatccaggaccaggagaaagatgtgaagctgcttcaacaggag
gtggaggccatcaatgcctctgccgataaagcagtggaggacagtgagaagatccttggt
tcagtgatccgtctcatccagaaaagaagctctgatgtaaagcagcagatcagatcccag
caggaaactgaagtgagtcgagtcaaagagcttcagaagaagctggagcaggagatcact
gagctgaagaggaaagatgctgagctggagaagctctcaatcacagaggatcacacccag
tttctccagaactacccctcactgtcagcactcagtgagtctacacactcatccagcatc
catttatggccaattaaagatgcatcagagggaccacaggagatgctaagagacacatgg
aaaaagatctcactgaaggtcactggacttggtattttactgtcagaactttggaccaga
gctgagtttttaggatattccaaagatatcactttggatccaaacacagcaaacaggtat
atcttgctatctaagaagaacagaaaagtaacattaatggagcagctacagttctatcca
gatcatccagacagatttgctcgatggtggcaagtactgagtagaaaccgtctgactgga
cgttgttactgggaggtggagtggatcggggaagcagtttatgttgcagttgcatacaag
aacatcagcagaaaaggaacgtcccaggattgtgtttttggattcaacaacaagtcctgg
gctttacaatgtgaggaaggatcctacactttttggcacaacagtgttaaaactccagta
tcaggtccagtttcctccagaataggagtgtatctggatcacagagcaggtattctgtct
ttctacagcgtctctggaaccatgactctcctccatagagtccagaccacattcactcag
cctctatatgctggagtttggctttctgatgacggagactctgctgagtttgttaaacta
aaacagttaggctaa
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