Cyprinodon tularosa (White Sands pupfish): 119772397
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Entry
119772397 CDS
T07496
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03440
Homologous recombination
ctul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119772397
03460 Fanconi anemia pathway
119772397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctul03032
]
119772397
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119772397
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119772397
DNA replication proteins [BR:
ctul03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119772397
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
119772397
Bloom's syndrome complex (BTR)
119772397
FA (Fanconi anemia) pathway
119772397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
BDHCT
RecQ_Zn_bind
HRDC
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
119772397
NCBI-ProteinID:
XP_038124726
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MESICALVDSIPEHELIALSCGDELLLKRAQRKRILACGTDSLSRRTQQPDSTGISGSFK
ETFSICGSSTTMSPSTSLPLDTKRSKQPQRSSVISIDHDSDCFDDSSLKPWQRRDSRKIY
VEDDSVCNSPSANSFTKPPVNIEKSSSDANDANLSFPTTLDYVQEKSKTPSHTAATDFEE
DGFYMDDFDIDDFNDSDIPDYFDEPQTKNVTKNLSTPSAAVKEEGANKSSWNKKPVSPVA
ASKPQKIYSPEPNFKNPAHDRFRGFNFPYSQEMMKIFHKRFGLHQFRFNQLEAINATLQG
EDTFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSLIVDQIQKLTTLDIPATSLSGDKS
DSEAGKIYMQLSRKDPIIKLLYVTPEKVSASNRLISALQNLYERSLLARFVIDEAHCVSQ
WGHDFRPDYKKLHELRQKFPKIPMMALTATATPRVQKDILNQLNMSRPQVFTMSFNRTNL
KYSVLPKKPKKVDEDCISWIKKHYPRDSGIIYCLSRNDCDALADSLKRAGIQALSYHAGL
SDGDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSMEGYYQESGRAGR
DGEISHCILFYSYTDVHRIKRIISMDREGDRHAKATHFSNLHSMVHFCENVMECRRIQLL
AYFGELKFNRNFCKEHPDVSCDNCAKPNQYKQRTVTDDVKKIVRFVQENCEKVGARFGKT
PQQSRLTLNMLVDIFIGAKSAKIQTGMFGMGAAYSRHNADRLFKKLVLDNVLVEDLYITN
NGQAVAYISAGPKAMNILSGQMEVEFYETESASSIRKHKASASKSVSKREEMVQECLKEL
IDLCKQLGKAFGLHYYNIFSTATLKKISERLSSDPEVLLQIDGVTEDKLEKYGAEVIKVL
QKYSEWQLTVEEQTENPGDGWIDTRRSEDEGMESSTYFCNQPAQGQKRKKAPFFKYSKKR
KGYGKQSYSSKGRGYSSTESSYSGSRGGSQSAGRGSRNAAGDARGGRTPGILSAPTPRNN
QRPFLKPTYSHMS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatctgtgctctggttgattccatccctgagcatgaactaatcgctttgtcc
tgtggggatgaacttttgctaaagagggcccaaaggaagaggattttagcttgtgggact
gattctttgagcaggaggacacagcagccagacagtacagggatttctggttctttcaaa
gaaaccttttccatctgtggttcttccactacaatgtcccccagcacttccctgccttta
gacactaaaaggtccaaacagcctcaaagatcttcagtcatctctattgaccatgactct
gactgctttgatgattccagtttaaaaccatggcaaaggcgagatagcaggaaaatatat
gttgaagatgacagtgtttgcaactctccatcagcaaacagcttcacaaaaccaccagtt
aatatagagaaatcaagctctgacgctaatgatgcaaatctttcattcccaaccacgtta
gattatgtgcaagaaaaatccaaaaccccatcacacacagccgcgacagactttgaggaa
gatggcttttacatggacgattttgatatagatgactttaatgattctgacatccctgat
tactttgatgaacctcaaactaagaatgtaactaaaaatctaagcactccatctgctgct
gtgaaagaagagggagcaaacaagtcgtcttggaacaagaaaccagtttctcctgttgct
gcttcaaagcctcagaagatttattcaccagagcccaactttaaaaacccagctcatgat
cgctttcgaggctttaacttcccctattcacaggagatgatgaagatcttccataaacga
tttggactccatcagttcaggtttaatcagctggaagcaatcaatgctactcttcaagga
gaagacacatttgttttaatgccaacaggtgggggtaaaagtttgtgctaccaattgcct
gcatgtgtctcacctggagtcactgttgtcatttctccgcttaaatctcttattgttgac
cagatccagaagctcaccacgttagatattccagcaacaagtttatctggtgataaaagt
gacagtgaagcgggaaagatttatatgcagctctccaggaaagacccgatcattaagctg
ctgtatgtaacgccagaaaaggttagtgcaagcaacaggttgatctcagctctgcaaaac
ctgtatgagcgaagccttttagcccgctttgtgattgatgaggcacattgtgtcagtcag
tggggccatgattttcgcccagactacaagaagttgcacgaactacgtcagaagttcccc
aaaataccgatgatggctctaacagccaccgccaccccccgtgtccaaaaagacattctc
aaccagctaaacatgagtcgacctcaagtatttaccatgagcttcaacagaacaaacctc
aagtactccgtgttgcccaagaaacccaaaaaagttgatgaggactgcatcagctggatc
aagaagcactacccacgtgactctggcattatctactgcctgtcccgtaatgactgcgat
gccctggcagacagtttgaagagagcaggaatacaggctctgtcatatcatgctggcctc
agtgatggcgacagagaatatgtgcagagcaaatggatcaatcaggatggctgccaggtg
atctgtgccaccatagccttcggcatgggaatagataagcctgatgtgcgctacgtgatc
cacgccagtctgcctaagtcaatggagggttactatcaggagtcaggaagagccggcaga
gatggcgagatctcgcactgcattctgttttattcctacactgacgtccaccgcatcaaa
aggatcatcagcatggacagagaaggtgacagacatgcaaaggcaactcatttcagcaat
ctacacagcatggtgcacttctgtgaaaacgtgatggagtgcagaagaatccagctgctc
gcgtactttggagagctgaagttcaacagaaacttctgtaaagaacatccggatgtcagc
tgtgataactgtgccaaaccaaatcaatacaaacagaggacggtgaccgatgatgtgaag
aagattgtgaggtttgtccaggagaactgtgagaaagtcggagcaaggtttggcaagact
cctcagcagagccgactgaccctgaacatgcttgtggacatttttataggggctaaatct
gccaagatacaaacaggaatgtttgggatgggagctgcttactcacgccataatgcagac
cgtctttttaagaaattagttcttgataatgttctagttgaggatctctacattaccaac
aatggccaagctgtggcttacatctctgcaggtccaaaagccatgaacatactttctggg
caaatggaggtggagttctatgagacagagagcgcatccagcatcaggaagcacaaagct
tctgcctccaagagtgtctccaaaagagaggagatggttcaggaatgtctgaaggagctg
atcgatctgtgcaagcagctgggcaaagcatttggtcttcattattacaacatcttctcc
actgccaccttaaagaagatatctgagaggctttcttctgatccagaagtcctcctacaa
attgatggtgtgacggaggacaaactggagaagtatggagctgaggtcattaaggtgctt
cagaaatactctgaatggcagctcactgtagaagagcagactgaaaatccaggagatggc
tggatagacaccagacgctcagaagatgagggtatggagtcctccacctacttctgcaac
cagcctgctcagggacagaagaggaagaaggctccattcttcaagtattctaagaaaaga
aaaggatatggaaaacaaagctactcttctaagggtcgtggatacagctccactgagtcc
tcgtattccggttccaggggtggctcccaaagcgcaggccgagggtctaggaatgctgca
ggagatgcacgaggaggcaggacaccaggaatcctgtcggccccgacacctcgaaacaac
cagcgtccctttttgaaaccaacctattctcacatgagctaa
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