Cyprinodon tularosa (White Sands pupfish): 119784225
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Entry
119784225 CDS
T07496
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119784225
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119784225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
U-box
Gp58
LMBR1
MRP-S31
AAA_23
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
119784225
NCBI-ProteinID:
XP_038142105
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MEQNQLDQETFSCLICQDLLKDPVAIPCGHSYCMRCIKIHWDKEDQIGIHSCPHCRKFFI
PRPDLEKNTMLAALVEQLKKTELQAAPGDHCYAGPEDVACDFCTGRKLKAIKSCLVCLAS
YCEEHLQPHYDSATFKKHKLVEPSKNLQENICSDHDEVMKMFCRTDQKCICYLCCLDEHK
DHDTVSAAAERTERQRELEERRGKIHQRIQDREKDVKLLQQEVEAINHSADKTVEDSEKI
FTELIRLIQKRSSDVKQQIRSQQETEVSRVKELQEKLEQEITELKKKEAELKQLLNTEDH
NQFLHSYPSLSAPSESTHSSSINIRPLRHFEDVTAAVSELRDKLQDIMRDTWTNISWTIT
EEESLLLEAEPKNRAGFLEYSCEITLDPNTANTQLLLSEGNRKVRRIDQHQSYSNHPDRF
SCPQVLSRESLTGRCYWEVEKKGIVYVAVAYKNISRVGKGDECKFGYNDKSWALDSYQNS
SRFGHNNIWTSISDAGSSRIGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLHAGVWV
YWTGGSAEFFKPK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctggaccaagaaaccttctcctgtttgatctgccaggatcttcta
aaggatccggtcgccattccctgtggacacagctactgtatgagatgtattaaaatacac
tgggataaagaggatcagataggaatccacagctgccctcattgtaggaaattctttata
ccgaggcctgacctggagaagaacaccatgttagcagctttagtggagcagctgaagaag
actgaactccaagctgctcctggtgatcactgctatgctggacctgaagatgtggcctgt
gatttctgcactggaagaaaactgaaagccatcaagtcctgtttggtctgtctggcttct
tactgtgaggaacaccttcagcctcattatgattcagctacatttaagaaacacaagctg
gtggagccctccaagaacctccaggagaacatctgctctgatcatgatgaggtgatgaag
atgttctgccgtactgatcagaaatgtatttgttatctctgctgtttggatgaacacaaa
gaccatgacacagtgtcagctgcagcagaaaggacggagaggcagagagagctggaggag
agacgaggaaaaatccatcagagaatccaggacagagagaaagatgtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgagaagatc
ttcactgagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggag
atcactgagctgaagaagaaagaagctgagctgaagcagctcttaaacacagaggatcac
aaccagtttctccacagctacccctcactgtcagcacccagtgagtctacacactcatcc
agcatcaatatccgtcctctgagacactttgaggatgtgacagcagctgtgtcagagctc
agagacaaactgcaggacattatgagagacacatggacaaacatctcatggacaatcact
gaagaggagtccctactgttagaagcagaaccaaagaacagagctggattcttagaatat
tcatgtgaaatcacactggatccaaacacagcaaatacacagctgttattatcagagggg
aacaggaaggtcagaagaattgatcaacatcagtcttattctaatcacccagacagattc
agttgtcctcaggttctgagcagagagagtctgacaggacgttgttactgggaggtggag
aagaaagggatagtttatgtagcagtcgcgtacaagaatatcagcagagtaggaaaaggg
gatgaatgtaaatttggatataatgacaaatcttgggcattagattcttatcaaaacagc
tctagatttggtcacaacaacatctggacctccatctcagacgctggttcctccagaata
ggagtgtacctggatcactcagcaggtattctgtccttctacagcgtctctgaaaccatg
actctcctccatagagtccagaccacattcactcagccgctacatgctggagtttgggtt
tactggactggaggttctgcagagttttttaaacccaaataa
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