Cyprinodon tularosa (White Sands pupfish): 119784275
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Entry
119784275 CDS
T07496
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119784275 (rpap1)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119784275 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
DUF4519
Motif
Other DBs
NCBI-GeneID:
119784275
NCBI-ProteinID:
XP_038142179
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All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MLRRPKPTDSEADLLREQERFLTSGAPSAACMVRRPDKRRGEAGDAEGDAEGVHGSENEG
HQKDMVTIEDLPDQLPSLTPAPPKKSRFKASRVTFEDEDAGERLDRHDTHISAVLSKIVE
RDTSCAPISLPASTGLAFPKVLHRSETSSQVPSLSVKGRRSIFARQIAAQRLKEAKTAKP
SLAEALQNAAPGEQILSSDSGDRPRLVSGEGLLGTDSSVETLRIHKENQAKLEGMSQSEI
LEEQKKLLSQLDPRLVEFIRSRKSLNDLPSESTAEDKCSIAGPPAENMESKESYNAALLC
PSPEEVEMEEDKELKAPPPLTEEDLPVKPQKEWLHMDTLEPEKLEWMRDLPSPRKKGTRK
AMLARFDFTGTLIPPSEDLPTHLGLHHHGEEPERAGYSLQELFILSRSQLIQQRSLALNT
LACIIAKARAGRYQSLLKGSVTSTLLDAGLLFLLRFALDDNIEGVMSAAVHALKALLVCV
EDEECLDSTFSWYHGLASFPLLPSSQEEEDEEDEGLSESMKETAKEKEERKSDYDVARQD
VVKGLLKMKLLPRLRYILEVIRPSPRAVQDILLILTRVARHSSSAASQVLDCPRLMETVM
SEFLPTSWECPSSLSPVSIYGHPLADAMKLLRVLATSGRHACARLLNSLGVRERLSCLLS
AEPSELLMEPNQALGITTEAYRLWAVAASYGQASQLYIDLYPALVRSLQSASSVMSAPHS
LPSLQLHRLSALLSLLTQVTHTAGCHEELQAGMVRAQGEECPPPPPVSWGHVSGLQPLLL
GHLKAVFKGLDDPVQKDSSLTLIPAYLIYLQAYYHQLSRQTCFKPVETLQELESLTSELL
LPLMCHSSVQGLMKNIRSSSVVCNDQLSLLHPEITPNLPGLACSEWRDRPGLVVPSSPFP
LLAGLGLLCNTITDIHKGLSRKFAGLLLSDSVIGYLQSCSHATPTLSHRTSWLLQHEHHV
LYLLLRLAHRLVPIEPEVAKHASLYHQVALVLLPWLLPGSEYLAHELLSTVIFSKDFISE
GHSGGPEAVELGELRLHTQQQSSPSLQTVGALLREACSQLSSIRGCYLTHLAHLEQSVLT
SRNVYLGRNPWISSHLLPELTGPTLPSDWPYIPLISLYERTGVSEGGGLAVEELPHGSLQ
AVTHCLQWLLLLEVWREEALKVIPPVAKLARLSCIFLSSSDLFLERPVQRLTWGLFRLLT
RESRLDSLDLDVPPLGLASFQDLYTALLSQYEAVSFGDRLFGCWVLLPLQRRYSVSLRLA
VFGEHVGMLRSLGVTMEQLSVPIERFTSPPEDSLPLLHLYFRCLVTGTLRLSWCPILYVV
ALSHINSFIFSQDAAVQEVEAARLSMLRKIYHLTDEVLRNHLLLFRLPRQHLQLGFDMYE
QLPTIRVKRLETVRGLQDDKGD
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgacgtccaaaacccaccgactctgaggcagacctcctgagggaacaggagcgt
ttcctgacctccggagctccctcggctgcctgtatggtccgccgtcctgacaagaggaga
ggagaggcgggagatgctgagggagatgctgagggagtgcacggcagtgaaaatgaagga
catcagaaggatatggtcaccattgaagatcttccagaccagctgccctctctaacacca
gcccctcctaagaagtctcgatttaaagccagtcgtgtcacttttgaggatgaggatgct
ggggagaggctggacagacatgatacccacatcagtgctgttctctccaagattgttgag
agagacaccagctgtgctcctatatccttaccggcgtcaacaggcctggcttttcccaaa
gtactccaccgctcagaaaccagcagccaggttccatctttatcagtcaaagggaggagg
agcatctttgcacgtcagattgcagctcaaagactaaaagaagcaaaaactgcgaaacca
tctttagctgaagctcttcagaacgctgcgccaggagaacagattctctcctcggattct
ggggatcgtcctaggttggtgtctggtgaggggcttttgggaacagacagttctgtagag
actctgaggatccacaaagagaaccaggcaaagctcgaagggatgtctcaatctgagatc
ctggaagagcagaagaaacttttgtctcagcttgatcccagactggtggagtttatcaga
tcaaggaaatctctgaatgatctcccatctgaaagcacagcagaggataaatgcagcata
gcaggtcctcctgctgaaaatatggaaagcaaagagtcttacaatgctgctctgttgtgt
ccgagtccagaggaggtggagatggaggaggataaggaactgaaagcacctcctccttta
actgaggaggatctccctgtgaagccccagaaggaatggctccacatggacaccttggag
ccggagaagttggagtggatgagggacttgccttcacccagaaagaaaggaaccagaaag
gccatgctggctcgttttgacttcaccgggaccttaatccccccctcagaggatctgcca
acccacttaggtctgcaccaccatggagaggagcctgagcgagctggttactctctgcag
gaattattcattctgtctcggagtcagcttatccagcaaagaagtctggctctcaacact
ctcgcctgcatcatcgcaaaagcacgagctggaagataccaatcccttctgaaaggcagc
gttacatccaccctgcttgatgcaggtcttctcttcctgcttcgctttgccctcgatgat
aacatcgaaggagtgatgtctgcagctgtgcatgcacttaaagcactcctagtgtgtgtg
gaagatgaagaatgtttggactccaccttctcctggtatcatggcctggcatctttcccg
ctgcttccatcctcacaggaggaggaagatgaagaggatgaagggctgagtgaaagcatg
aaggagacggctaaagaaaaagaagaaaggaagagtgattatgatgttgccaggcaggat
gttgttaagggtctgttgaagatgaagctcctccccaggctgcgctacattctagaggtg
atccggccgtccccgcgcgctgttcaggacatcctgctcatcctaacacgtgtcgcacgg
cactcctcatcagctgcctcccaggtgttggactgtcctcgtctgatggagacggtgatg
tcagagttccttcccacatcctgggagtgtccatcttcactcagccctgtctcaatttat
ggacaccctctggccgacgccatgaagctcttgagggttttggcaacatctgggagacac
gcatgtgccagactgttaaactctctgggggtgcgggagcgcttgtcctgcctcttgagt
gctgagcccagcgagctgctgatggagcctaaccaggccttggggatcaccactgaggcc
tacaggctgtgggctgtagctgccagctatggacaagccagccaactgtacatagacctg
tacccagccttggtgaggtcgctgcagtcagccagcagcgtgatgtcagccccacattct
ctgccgtctctgcagctgcaccgtctctcagctctgctttctctgctcacacaagtcaca
cacaccgctggctgccatgaggagctccaggctggcatggtcagagctcagggagaggag
tgcccccctccacctcctgtttcctggggtcatgttagtggtttgcagcccctcttgttg
ggacatttgaaggctgtcttcaaaggactggatgacccggttcagaaggacagtagcctg
actttaatacctgcttatttaatctaccttcaagcttactaccatcagctctccagacag
acctgcttcaagccagtggagactctgcaggaactggagagtttgacttcagagcttctc
ctccctctcatgtgtcacagttctgtgcaaggcctgatgaagaatatccggtcctcctca
gttgtgtgtaatgatcagttaagtcttctgcatccagagattaccccaaaccttcctggt
ttagcctgttcagagtggagggatcgcccaggactggttgttcccagctccccatttcct
ctcctggcaggactgggactcctctgtaataccatcacagatatccataaaggtctcagt
agaaagtttgcaggcctcctgctatcagactctgtgattggttacctgcagagctgcagc
cacgccacacccacactgtcccaccgcacatcttggctcctccagcatgaacaccatgtt
ctctacctgctgctccggctggcacacaggctggttccaattgagcctgaagtagccaaa
catgcctcactttaccaccaggtggcgctggtgcttctcccctggttactgccgggtagc
gagtacctggcacatgagctgctctccactgttatcttcagcaaggacttcatatcagag
ggacacagtggtggaccagaggctgtggaactcggggagctgagactccacacccagcag
cagtcgtctccatctctccagactgttggggctcttcttagagaagcctgcagccagctg
tcctccatacgcggctgctacctcactcacctggcccacctggaacagtccgtgctcacg
tcccgaaacgtttatcttgggcgcaacccgtggatcagctcgcatctccttccagagctc
accgggcctacgctcccctccgactggccttacatcccactgatcagcctttatgagcgg
accggcgtgtctgaaggtggagggttggcagtggaggagcttcctcatggatctctgcag
gcagtgacccactgtctgcaatggttgctgctgctggaggtctggagggaagaagctctg
aaggtcatccctcctgtcgccaaactcgcccgcctgtcttgcatcttcctcagttcgagc
gatctgttcctggagagacctgttcagaggcttacctggggtctgttcagactgctcacc
agggagtccagattggactctttggacctggatgtgcctcctctaggtcttgcctccttc
caggacctgtacacagcccttttgtcacagtatgaagctgtatcttttggagacaggctg
tttggctgttgggttctcctccctctgcagaggaggtacagcgtctccttgaggctggct
gtttttggagaacatgtggggatgcttagatccctgggtgttactatggagcagttgtcc
gtccccatcgagcggttcacctcaccaccggaagactcccttcctcttcttcacctgtac
tttcgctgtttagtgacggggaccctcaggttgtcatggtgtcccatcctttatgtggtc
gccttgtctcacatcaactccttcatcttctctcaggatgctgcagtgcaggaggtggaa
gcagctcgactgagtatgctgaggaaaatctaccacctgacagacgaggtgttgaggaac
cacttgcttcttttccgtttgccccgacagcacctacagcttggctttgacatgtatgaa
cagctgcccaccatcagggtcaagcgtttagagacggttcgcggtctgcaagatgacaaa
ggagactga
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