Cyprinodon tularosa (White Sands pupfish): 119784332
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Entry
119784332 CDS
T07496
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03250
Viral life cycle - HIV-1
ctul04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119784332 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119784332 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119784332 (samhd1)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119784332 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
119784332
NCBI-ProteinID:
XP_038142253
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MENRKRPAEPSVSPGDKFHTPQKRVSLVPVWQPDSDFMRWGIGETCQYLQREGLGKWEEI
FRAEKITGVGLRYLRDADLEKIGIKCLGDRLQILHSLRKLWQIEAEAKKVFNDPIHGHVE
LHPLLIKIIDTPQFQRLRNIKQLGGTYYVFPGASHNRFEHSIGVGYLAGRLAQALNDRQP
ELLISRRDILCVEIAGLCHDLGHGPFSHMFDGMFIPKARPGLNWKHEAASLKMFDYLVED
NGLKPVMEEHGLVLPEDLDFIKEQIAGPMESSLARGEKWPYKGRTKDKSFLYEIVANKRN
GIDVDKWDYFARDCYHLGIQNNFDYQRFLKFARVIEVDGKKHICTRDKEVGNLYDMFHTR
NCLHRRAYQHKVGNVIETMITEAFLKADPHIKIAGSQGKIFTLSTAIDDMVAYTKLTDNV
FEQILNSSSPELAEARLILHKIICRHLYKCLGQTRPDKALTVTQEIMHGWEADLAKAIPQ
NGSQDADLKPEDFVVSVVVMDYGMKEKNPINNVRFYCKDDPTKAIKICKNQVSKLLPEHF
AEQLIRVYCKKTDEKTMETAKKHFVQWCMDMNFSKPQDGDIIAPELTPLKASWHNNNEGE
DSDDSSSKETNPLVNGFKKAKTQLNFK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcgtaagcgacccgcagagccatccgtgagcccgggcgacaagttccacacg
ccgcagaagagagtgtcgctggttcccgtctggcagccggattctgacttcatgcggtgg
ggaatcggagaaacatgtcagtacctgcaaagggaaggactcggaaaatgggaggaaata
ttcagagctgagaagattacaggtgtggggctgaggtacctgagggatgcagacctggaa
aagattggcataaagtgtctcggggaccgtctgcagatcctgcacagcctcagaaaacta
tggcagattgaagcagaggccaaaaaggtttttaatgatccaattcacggccatgtggag
ctacacccgcttctcatcaaaatcattgacactcctcagtttcagcgacttcgaaacatc
aagcaacttggaggcacatattatgtttttccaggcgcgtcccataaccgctttgaacac
agcattggggtcgggtacttggctggacgacttgctcaagctctcaatgacaggcaacca
gagctcctcatctctcgcagggacattctttgtgtggaaattgctggactgtgccatgac
ctgggacacggacctttctcccatatgtttgacggcatgtttatccccaaagcacgccca
ggacttaactggaaacacgaggccgcctctttgaaaatgtttgactaccttgtggaagac
aacggcttgaagccagttatggaggagcacggcctggtgctcccagaggacctggacttc
atcaaggagcagatcgcaggtccgatggagagcagtttggctcgaggagaaaagtggcca
tacaaaggccgtactaaagacaagtccttcctctatgagattgttgcaaacaaaaggaac
ggcattgacgtggataagtgggattattttgccagggactgctaccatttgggcatccag
aacaactttgactatcagcgctttctaaaatttgcaagggtcattgaagtggacgggaag
aagcacatctgcacaagagataaggaggtaggcaatctgtacgacatgttccacactagg
aactgtctccacaggagagcttaccagcacaaagtgggcaacgtcattgaaacaatgata
acagaagcttttttaaaagcagacccacacatcaagatcgcgggctctcagggaaaaatc
ttcactctgtccacagcgatcgatgacatggtggcctacaccaagttaacggataatgtg
tttgaacagatcctgaactcctcctctccagagcttgcagaagcaaggctgatccttcac
aaaatcatctgtcggcacctctacaaatgtctggggcaaactcggccagataaagccttg
actgtcactcaggaaatcatgcatggatgggaggcagatttggctaaggccatccctcag
aatggctcccaagatgctgatctgaagccagaggattttgtagtcagtgtcgtagtgatg
gactatggtatgaaggaaaagaaccccatcaataacgtgcgtttttactgcaaggatgac
ccaacaaaagctataaagatctgcaaaaaccaggtatctaaacttctcccagagcacttt
gctgaacagctgattagggtctactgcaagaaaacagatgagaagactatggagactgcc
aagaagcactttgttcagtggtgcatggacatgaacttctcgaagcctcaggatggagat
attatagcgcctgagctgactcctcttaaagcaagctggcacaacaacaatgaaggtgag
gacagtgatgacagcagctccaaagaaacaaaccctcttgtgaatggatttaagaaagct
aaaactcagcttaactttaagtaa
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