Cyprinodon tularosa (White Sands pupfish): 119788191
Help
Entry
119788191 CDS
T07496
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119788191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119788191
03041 Spliceosome [BR:
ctul03041
]
119788191
03036 Chromosome and associated proteins [BR:
ctul03036
]
119788191
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119788191
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119788191
mRNA cycle factors
Common to processing body (P body) and stress granule
119788191
Spliceosome [BR:
ctul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119788191
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119788191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
119788191
NCBI-ProteinID:
XP_038148315
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MSHVVVDAPHGLDQQLAVLDLNADGQGGGTGRRYIPPHLRNKDAGKNAGNCYPAAKQCGY
SVAPLNFYGLKLQQRWQADGQQAQGGSCPSGWEDVTAGYPPMASQELAFYHAFSGGWRSR
SDSPGWDGGRTNGSVNGFHDNRANGGFGGRGPPRNDRGGRGAYRGNRGGGSFNQPMQSSG
FGGYENKEGGWGGAPRDAAYNSFGGRNDRSKSNFYSDRGAGSRGRYERGGFGGGGNSRWV
EDSREDDWSKPTAPNERLENELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVDMG
EIIMGNISLTRYTRPTPVQKYAIPIIKNKRDLMACAQTGSGKTAAFLLPVLSQIYTEGPG
DALQASKSSGQDNGRYGRRKQYPISLVLAPTRELALQIYDEARKFAYRSHVRPCVVYGGA
DIGQQIRELERGCHLLVATPGRLVDMMERGKIGLDHCNYLVLDEADRMLDMGFEPQIRRI
VEQDTMPPKGIRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEE
NDKRSFLLDLLNATDAAGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDRE
EALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLA
TSFFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQHKSSSRGRSKRFSGGFGAKDYR
QSSGGSGGFAGNRSGRNTGGNRGFGGGFGGNFYSDGYGGNYNPSGSVDWWGN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgttgatgctccgcacggtctggatcagcagctcgctgtgctagac
ttgaacgctgacggtcagggcggaggaactggcaggcgctacattccacctcacctgagg
aacaaagatgcagggaaaaacgcaggaaattgttatcccgctgctaaacagtgcggttat
tcagtggcgcctctaaatttctatggcctcaagctgcagcagcggtggcaggctgatggt
cagcaggctcagggtggcagctgtccgtcaggatgggaggacgttaccgccggttacccc
cctatggcctcccaggagctggccttctaccatgccttcagcggcggctggcggagcaga
agcgactcgcctggatgggacggaggacgcaccaacggatccgtgaatggtttccatgac
aaccgtgctaatggggggtttggaggccgcggaccccctcgcaacgacagaggtgggcgt
ggcgcctaccgtggtaacaggggtggaggctcctttaatcagccaatgcagagttcaggc
tttggaggctacgagaacaaggaggggggctgggggggggctcccagagacgctgcctac
aacagcttcggaggacgcaacgatcgctccaagtctaacttctacagcgaccgcggcgcc
ggctccagggggagatacgagcgcggaggattcggtggaggaggaaacagccgctgggtg
gaggactccagagaggacgactggtccaagcccacagcgcccaacgagcgtctggaaaat
gagctgttctctggaagcaacacggggataaactttgagaagtacgatgatattcctgtg
gaggccaccgggtccaactgcccgccgcacatcgagagcttccatgatgtggacatgggg
gagatcatcatggggaacatctccctgacccgctacaccaggcccaccccggtccagaag
tatgccattcccatcatcaagaacaagagagacctgatggcgtgcgcccagactggctcc
ggtaaaacagccgccttcctgctgccggttctgagtcagatctacaccgaaggtccagga
gacgctctgcaggcgtccaaaagcagcggacaggacaacggacggtacggccgccggaag
cagtaccccatctccctggtcctggctccaaccagagagctggccctgcagatctacgac
gaggccaggaagtttgcttaccgctcccatgtgcgtccctgcgtggtgtacggcggcgcc
gacatcggccagcagatccgggaactggagagaggctgccatctgctggtggccacaccg
ggacgtctggtggacatgatggagaggggcaagatcggcctggaccactgcaactacctg
gtcctggacgaggccgaccgcatgctggacatgggcttcgagccgcagatcagacgcatc
gtggagcaggacaccatgccgcctaagggcatccgccagaccatgatgttcagcgccacc
ttccccaaagaaatccagatcttagcccgggacttcctggaggactacatcttcctggct
gtggggcgagtgggttccacctcagagaacatcacgcagaaggtggtctgggtggaggag
aacgacaagaggtccttcctgctggacctgctcaacgctaccgacgccgcaggcaaagac
tcgctgactctggtgtttgtggagaccaagaaaggagccgacgccctggaggacttcctg
taccgggagggctacgcctgcaccagtatccatggagaccgctcccagcgggaccgagaa
gaagctttgcatcagttccgctccggacgctgccccatcctggtggctacagcggtggcg
gcgcgaggtctggacatcagcaacgtgaagcatgtgatcaactttgacctgcccagcgac
atcgaggagtacgttcaccgtatcggccgtacgggacgtgtgggaaaccttggtttggcc
acgtcgttctttaacgacaaaaacagcaacataaccaaagacctgctggacatcctggtg
gaggccaagcaagaggttccctcctggctggagagcctggcctatgaacaccagcacaag
agctccagccgcggacgatccaagaggttctccgggggttttggagccaaagattaccgt
cagtcctccggtggttctggaggcttcgctggaaaccgctcaggacgcaacactggagga
aaccgtggctttggaggtggcttcggtggcaacttctacagcgacggctacggaggaaac
tacaacccctctgggagcgtggattggtgggggaactag
DBGET
integrated database retrieval system
